Click here to switch to the map view.

The map label for this gene is 116688262

Identifier: 116688262

GI number: 116688262

Start: 275143

End: 277485

Strand: Reverse

Name: 116688262

Synonym: Bcen2424_0238

Alternate gene names: NA

Gene position: 277485-275143 (Counterclockwise)

Preceding gene: 116688263

Following gene: 116688261

Centisome position: 7.96

GC content: 66.88

Gene sequence:

>2343_bases
ATGTTCTCGACCGAACTGCCCGCCTCCGCCGCGCTCACGCCTGAACAGCAGCTTGCGCAGGACATTGCGCTCGTCATGGA
GAACGCGCTCGAGCGCCAGCGCAGCGGCGCGTTCGACGACGCCCGGGCGCTGTACGAGGCCATCCTCGACGCGGTGCCCG
CGCATGGCGATGCGCATTACAACCTCGCGGTGCTGCTGGCCGATACGGGTCAGGCGGCTGATGCGGTACCGCATTTCGAA
GCCGCCATCGGCGCGAGCCCGGACAACGGCTACTACTGGGTTAGCTACATTCACGCGCTGCATCGCAGCGGGCAGACGGC
CGCCGCGTGGATCGCGGTCGAAATCGCGCAACAGCGCGGCGTGCACGGCCCGGCGCTCGACGGGCTGATCGCGCAACTGG
CGTCGCCCGACGTCGTGCTCGCGACGGCCGCGGTTGCGCCGAGCGGCATCGACATGGCGATCGTTCTGGAAACCGCAGCC
GGCCACGCAGGGAAGAGCGACGCCGGCAGGCCGGTCCGGCGCCCCAATCAGACGCTGCTGCAAAAGCACGCGGCGCTGTT
CGACAAGAACAAGCACGCGGAAGCCACCGCGCTTGCGCAGCAACTGGTCGCCGATTACCCGGAAGACGGTGCATGCTGGC
GCGCGCTGTCCGCATCGCTTCACCGGGAAGGCCGCTTCGCGGAGATGATCGAGGCCGGCTTTCGTACGATCGAATTGCTG
CCGGATGAATTGCTCGTGCGCATGCTGCTCGCCGACACGCTGCGGATGGTGAACCGTCTCGCGGAGGCCGACGAGCAGTG
CACGCGCCTGCTCCAGCTTCAGCCCGATCACCCGGAGGCCTTCCGGATTCGCGGTCTGGTGCTGTTCGCGCTGCGCCGCA
CGGATGAAGCGATCGCGGCGTGCCGTCGCGCGGTCGAGCTTGCGCCCAACGCCGCTGCGCCGTGCGGCACGCTCGGCTTC
GTGCTGCTCGAACAGGGCGCCACGCAGGAAGCGATACGCTGGCTGAAGCGCTCGATCGAAATCAACCCGACCGACAGCGT
CACCCACAGCAGCATGTTGTTCTGTATTACGCACAGCAGCGACTTCGATCCGCAGGCGCTCATTGCCGAACACCGCAAGT
TCGGCGAGCGCTACGGCAATCACAAGCGCAAGCGCGCGGCCGTGTTCTCGAACTCGCGCGACCCGGCGCGCAAGCTGCAG
GTCGGCTTCGTGTCGGGCGACCTGTTCAGCCACGCGGTCGCCTCCTACGCGGTGCCCGTGATCGAGCATCTCGCAGCCGA
TCCCGGCATTGCGATGCACTTCTATCACAATCACTTCGAGGAAGATCACGTATCCGAGCGCTTCAAGGCCCACGCCACGA
CGTGGCGCACCGTCGCCGGCATGAGCGACACGGCCTTCCTCGAACGCCTGCGCAACGACCGCATCGACATCGTGATCGAC
CTGTCGGGGCACACCGGTCGTAACCGGCTGGTCGCGCTGGCGCAGCGTGCGGCGCCCGTGCAGGCGTCGTGGATCGGCTA
TCCGGCCACGACCGGCCTCGCCGCGATGGACTACTTCATTGCGGATCGCTTTGTCGCGCCGCACGGCGAATTCGACGATC
AGTTCGTCGAGCAGATCGTGCGGCTGCCGGCCATCTCGTCGTTCATGCCACCGGCAAATTGCCCGCCCGTCAATGTCTTG
CCCGCGCTACGGAACGGCTATACGACGTACGGCAGCTTCAACCGCCTGAATAAACTCAGCCCCCACGTAATCGGCGTCTG
GGCGCGCGTGCTGCATGCGGACCCAACCGCGCGCATGGCGCTCGGCGCAATCGGCAACGAGGGAGACCAGCGGGTGCTGA
TCGACTGGTTTGCCGCGGCCGGCATCGACGCCAGCCGCCTGTCGTTCCACCGGCGCTCGAACATTCCTGTCTACCTGCAA
CAGCATCATGGCGTCGACCTCTGTCTGGACACGTTCCCTTACACAGGTTCGACCACGACGCTAAATGCCCTGTGGATGGG
CGTGCCGACGCTGACCATCGCTGGCGTGACGCTGGCCGGCCGGGGCAGTGCGAACTGGTTGATGCACGTCGGGCTCGACA
CATACATAGCGAAAAACGAGGACGAGTTCGTTGCCAAAGCGCTCGCCCTCGGCAAAGACACTGCGTCGCTTCAGGCGCTC
CGCTCCGGCCTGCGCGCGCGCTGCGCCGAGTCGGCCGCGTTCCGCCCGGAGATCGTCGCGGCCGGACTGTCGTCGGCGCT
GCGCACGATGTGGGCACGCTGGTGCGCGGGCGAGCCCGCGATCGCCTTCGACACGCCTCTTTTCGACGATACGGCGACCG
CACCGGCCACGACCGAGGCCTGA

Upstream 100 bases:

>100_bases
CAATCGGCCAAACTGACCGGGCTTTTCCCGTCAGCTCGCGGCATCGGCGCAACGGCACGCTACCCATAATGGTATCGACC
GACTTTCCGCAGATCTCATC

Downstream 100 bases:

>100_bases
CCTCCACGCAACAGAGGGATCACCATGACTGCCAGCCTGCCTGCGTCGTCCGTCGCACAACTGCCTCGCGACAGCATCTA
CGTCACGCAGCCGTACCTGC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; SPINDLY Family O-Linked N-Acetylglucosamine Transferase; Methyltransferase Type; Tetratricopeptide TPR_1 Repeat-Containing Protein; TPR Repeat Protein; TPR Domain Protein; FkbM Family Methyltransferase; SPY Protein; Glycosyltransferase TPR Domain Protein; Glycosyl Transferase Family Protein; Tetratricopeptide Repeat-Containing Protein; Tpr Repeat-Containing Protein; Methyltransferase Regulatory Domain; Porphyrin Biosynthesis Protein; Tetratricopeptide Domain Protein; Transferase; TPR Repeat Domain-Containing Protein; Tetratricopeptide Repeat Family Protein; TPR Repeat-Containing Glycosyl Transferase; Sulfotransferase; Peptidase S1 And S6 Chymotrypsin/Hap; O-Linked GLCNAC Transferase; TPR Domain/SEC-C Motif Domain Protein; Glycosyl Transferase TPR Repeat Protein; TPR Repeat; O-Linked N-Acetylglucosamine TransferaNDLY Family; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Protein; TPR Repeat-Containing SPINDLY Family Protein; O-Linked Acetylglucosamine Transferase

Number of amino acids: Translated: 780; Mature: 780

Protein sequence:

>780_residues
MFSTELPASAALTPEQQLAQDIALVMENALERQRSGAFDDARALYEAILDAVPAHGDAHYNLAVLLADTGQAADAVPHFE
AAIGASPDNGYYWVSYIHALHRSGQTAAAWIAVEIAQQRGVHGPALDGLIAQLASPDVVLATAAVAPSGIDMAIVLETAA
GHAGKSDAGRPVRRPNQTLLQKHAALFDKNKHAEATALAQQLVADYPEDGACWRALSASLHREGRFAEMIEAGFRTIELL
PDELLVRMLLADTLRMVNRLAEADEQCTRLLQLQPDHPEAFRIRGLVLFALRRTDEAIAACRRAVELAPNAAAPCGTLGF
VLLEQGATQEAIRWLKRSIEINPTDSVTHSSMLFCITHSSDFDPQALIAEHRKFGERYGNHKRKRAAVFSNSRDPARKLQ
VGFVSGDLFSHAVASYAVPVIEHLAADPGIAMHFYHNHFEEDHVSERFKAHATTWRTVAGMSDTAFLERLRNDRIDIVID
LSGHTGRNRLVALAQRAAPVQASWIGYPATTGLAAMDYFIADRFVAPHGEFDDQFVEQIVRLPAISSFMPPANCPPVNVL
PALRNGYTTYGSFNRLNKLSPHVIGVWARVLHADPTARMALGAIGNEGDQRVLIDWFAAAGIDASRLSFHRRSNIPVYLQ
QHHGVDLCLDTFPYTGSTTTLNALWMGVPTLTIAGVTLAGRGSANWLMHVGLDTYIAKNEDEFVAKALALGKDTASLQAL
RSGLRARCAESAAFRPEIVAAGLSSALRTMWARWCAGEPAIAFDTPLFDDTATAPATTEA

Sequences:

>Translated_780_residues
MFSTELPASAALTPEQQLAQDIALVMENALERQRSGAFDDARALYEAILDAVPAHGDAHYNLAVLLADTGQAADAVPHFE
AAIGASPDNGYYWVSYIHALHRSGQTAAAWIAVEIAQQRGVHGPALDGLIAQLASPDVVLATAAVAPSGIDMAIVLETAA
GHAGKSDAGRPVRRPNQTLLQKHAALFDKNKHAEATALAQQLVADYPEDGACWRALSASLHREGRFAEMIEAGFRTIELL
PDELLVRMLLADTLRMVNRLAEADEQCTRLLQLQPDHPEAFRIRGLVLFALRRTDEAIAACRRAVELAPNAAAPCGTLGF
VLLEQGATQEAIRWLKRSIEINPTDSVTHSSMLFCITHSSDFDPQALIAEHRKFGERYGNHKRKRAAVFSNSRDPARKLQ
VGFVSGDLFSHAVASYAVPVIEHLAADPGIAMHFYHNHFEEDHVSERFKAHATTWRTVAGMSDTAFLERLRNDRIDIVID
LSGHTGRNRLVALAQRAAPVQASWIGYPATTGLAAMDYFIADRFVAPHGEFDDQFVEQIVRLPAISSFMPPANCPPVNVL
PALRNGYTTYGSFNRLNKLSPHVIGVWARVLHADPTARMALGAIGNEGDQRVLIDWFAAAGIDASRLSFHRRSNIPVYLQ
QHHGVDLCLDTFPYTGSTTTLNALWMGVPTLTIAGVTLAGRGSANWLMHVGLDTYIAKNEDEFVAKALALGKDTASLQAL
RSGLRARCAESAAFRPEIVAAGLSSALRTMWARWCAGEPAIAFDTPLFDDTATAPATTEA
>Mature_780_residues
MFSTELPASAALTPEQQLAQDIALVMENALERQRSGAFDDARALYEAILDAVPAHGDAHYNLAVLLADTGQAADAVPHFE
AAIGASPDNGYYWVSYIHALHRSGQTAAAWIAVEIAQQRGVHGPALDGLIAQLASPDVVLATAAVAPSGIDMAIVLETAA
GHAGKSDAGRPVRRPNQTLLQKHAALFDKNKHAEATALAQQLVADYPEDGACWRALSASLHREGRFAEMIEAGFRTIELL
PDELLVRMLLADTLRMVNRLAEADEQCTRLLQLQPDHPEAFRIRGLVLFALRRTDEAIAACRRAVELAPNAAAPCGTLGF
VLLEQGATQEAIRWLKRSIEINPTDSVTHSSMLFCITHSSDFDPQALIAEHRKFGERYGNHKRKRAAVFSNSRDPARKLQ
VGFVSGDLFSHAVASYAVPVIEHLAADPGIAMHFYHNHFEEDHVSERFKAHATTWRTVAGMSDTAFLERLRNDRIDIVID
LSGHTGRNRLVALAQRAAPVQASWIGYPATTGLAAMDYFIADRFVAPHGEFDDQFVEQIVRLPAISSFMPPANCPPVNVL
PALRNGYTTYGSFNRLNKLSPHVIGVWARVLHADPTARMALGAIGNEGDQRVLIDWFAAAGIDASRLSFHRRSNIPVYLQ
QHHGVDLCLDTFPYTGSTTTLNALWMGVPTLTIAGVTLAGRGSANWLMHVGLDTYIAKNEDEFVAKALALGKDTASLQAL
RSGLRARCAESAAFRPEIVAAGLSSALRTMWARWCAGEPAIAFDTPLFDDTATAPATTEA

Specific function: Unknown

COG id: COG3914

COG function: function code O; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=552, Percent_Identity=22.8260869565217, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI32307150, Length=552, Percent_Identity=22.8260869565217, Blast_Score=89, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI115532692, Length=191, Percent_Identity=26.7015706806283, Blast_Score=89, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI115532690, Length=191, Percent_Identity=26.7015706806283, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI17647755, Length=212, Percent_Identity=29.2452830188679, Blast_Score=98, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24585827, Length=212, Percent_Identity=29.2452830188679, Blast_Score=98, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24585829, Length=212, Percent_Identity=29.2452830188679, Blast_Score=98, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84711; Mature: 84711

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSTELPASAALTPEQQLAQDIALVMENALERQRSGAFDDARALYEAILDAVPAHGDAHY
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCE
NLAVLLADTGQAADAVPHFEAAIGASPDNGYYWVSYIHALHRSGQTAAAWIAVEIAQQRG
EEEEEEECCCCCHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
VHGPALDGLIAQLASPDVVLATAAVAPSGIDMAIVLETAAGHAGKSDAGRPVRRPNQTLL
CCCCHHHHHHHHHCCCCEEEEEHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHH
QKHAALFDKNKHAEATALAQQLVADYPEDGACWRALSASLHREGRFAEMIEAGFRTIELL
HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEECC
PDELLVRMLLADTLRMVNRLAEADEQCTRLLQLQPDHPEAFRIRGLVLFALRRTDEAIAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
CRRAVELAPNAAAPCGTLGFVLLEQGATQEAIRWLKRSIEINPTDSVTHSSMLFCITHSS
HHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCC
DFDPQALIAEHRKFGERYGNHKRKRAAVFSNSRDPARKLQVGFVSGDLFSHAVASYAVPV
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHEEEEEECCHHHHHHHHHHHHHH
IEHLAADPGIAMHFYHNHFEEDHVSERFKAHATTWRTVAGMSDTAFLERLRNDRIDIVID
HHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEE
LSGHTGRNRLVALAQRAAPVQASWIGYPATTGLAAMDYFIADRFVAPHGEFDDQFVEQIV
ECCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
RLPAISSFMPPANCPPVNVLPALRNGYTTYGSFNRLNKLSPHVIGVWARVLHADPTARMA
HCCHHHHCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCHHHHH
LGAIGNEGDQRVLIDWFAAAGIDASRLSFHRRSNIPVYLQQHHGVDLCLDTFPYTGSTTT
HHCCCCCCCCEEEEEEHHHCCCCHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCC
LNALWMGVPTLTIAGVTLAGRGSANWLMHVGLDTYIAKNEDEFVAKALALGKDTASLQAL
HHHHHHCCCHHHEECEEEECCCCCCEEEEECCHHHEECCCHHHHHHHHHHCCCHHHHHHH
RSGLRARCAESAAFRPEIVAAGLSSALRTMWARWCAGEPAIAFDTPLFDDTATAPATTEA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFSTELPASAALTPEQQLAQDIALVMENALERQRSGAFDDARALYEAILDAVPAHGDAHY
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCE
NLAVLLADTGQAADAVPHFEAAIGASPDNGYYWVSYIHALHRSGQTAAAWIAVEIAQQRG
EEEEEEECCCCCHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
VHGPALDGLIAQLASPDVVLATAAVAPSGIDMAIVLETAAGHAGKSDAGRPVRRPNQTLL
CCCCHHHHHHHHHCCCCEEEEEHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHH
QKHAALFDKNKHAEATALAQQLVADYPEDGACWRALSASLHREGRFAEMIEAGFRTIELL
HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEECC
PDELLVRMLLADTLRMVNRLAEADEQCTRLLQLQPDHPEAFRIRGLVLFALRRTDEAIAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
CRRAVELAPNAAAPCGTLGFVLLEQGATQEAIRWLKRSIEINPTDSVTHSSMLFCITHSS
HHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCC
DFDPQALIAEHRKFGERYGNHKRKRAAVFSNSRDPARKLQVGFVSGDLFSHAVASYAVPV
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHEEEEEECCHHHHHHHHHHHHHH
IEHLAADPGIAMHFYHNHFEEDHVSERFKAHATTWRTVAGMSDTAFLERLRNDRIDIVID
HHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEE
LSGHTGRNRLVALAQRAAPVQASWIGYPATTGLAAMDYFIADRFVAPHGEFDDQFVEQIV
ECCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
RLPAISSFMPPANCPPVNVLPALRNGYTTYGSFNRLNKLSPHVIGVWARVLHADPTARMA
HCCHHHHCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCHHHHH
LGAIGNEGDQRVLIDWFAAAGIDASRLSFHRRSNIPVYLQQHHGVDLCLDTFPYTGSTTT
HHCCCCCCCCEEEEEEHHHCCCCHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCC
LNALWMGVPTLTIAGVTLAGRGSANWLMHVGLDTYIAKNEDEFVAKALALGKDTASLQAL
HHHHHHCCCHHHEECEEEECCCCCCEEEEECCHHHEECCCHHHHHHHHHHCCCHHHHHHH
RSGLRARCAESAAFRPEIVAAGLSSALRTMWARWCAGEPAIAFDTPLFDDTATAPATTEA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA