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The map label for this gene is yfbE [C]

Identifier: 116688261

GI number: 116688261

Start: 273970

End: 275118

Strand: Reverse

Name: yfbE [C]

Synonym: Bcen2424_0237

Alternate gene names: 116688261

Gene position: 275118-273970 (Counterclockwise)

Preceding gene: 116688262

Following gene: 116688260

Centisome position: 7.9

GC content: 60.49

Gene sequence:

>1149_bases
ATGACTGCCAGCCTGCCTGCGTCGTCCGTCGCACAACTGCCTCGCGACAGCATCTACGTCACGCAGCCGTACCTGCCGCC
ACTCGACGAATTCATACCGTACCTCCAGCAGATCTGGGACAGCCGGGTGCTCACCAACGGCGGCCCGTTTCACCAGCAAT
TCGAGCGCGCACTATGCGACTACCTCGACGTGCCTCACCTGTCGCTTTTCGCGAACGGTACGCTCGCACTCGTCACCGCG
CTGCAGGCGCTGCGAATCACCGGCGAAGTGATCACGACGCCATACTCGTTCGTCGCGACTGCACACTCGCTGCTGTGGAA
CGGCATCAAGCCGGTGTTCGTCGACGTGGACCCCGATTCGCTGAATCTGGACCCTGCGAAGATCGAAGCCGCCATCACGC
CGCAGACAAGCGCGATCATGCCGGTGCACTGCTACGGCCGACCCTGCGACGTCGAGGCGATCCAAAAAATCGCGGACAAC
TACAACCTGCGCGTCATTTATGACGCAGCACACGCGTTCGGCGTTCACACGCCGACGGGCAGTCTGTTGCGGCACGGCGA
CCTGTCGATACTGAGTTTTCACGCGACCAAGGTATTCAATACCTTTGAAGGCGGCGCGATCATCTGTCCCGATGCGAAAA
CGAAGCAACGCATCGATCATCTGAAGAATTTCGGGTTCGTCGACGAAGTCACGGTCGTGGCGCCCGGCATCAACGGCAAG
ATGAGCGAGATCAACGCCGCGTTCGGATTGCTGCAGCTTCAGCATGTCGATGCGGCAATCGCGCGCCGTGCGCATATCGA
TGCCATGTATCGCGAGCAACTGAGCGGGTTGCGTGGACTTCGATGCATCGAGCACGGCGACGGCGTACGACACAACTACT
CGTACTTTCCGATTCTCGTCGACGACGAATATCCGGTCAGCCGCGACGCGCTCTACAGCAAGCTGCGTGCACACGAAATT
TATGTGCGCCGTTACTTCTACCCGCTCATCTCGGAATTTCCGATGTATCGCGGGTTGCCGTCGGCGCACAAGTCGCTGCT
GCCCGCCGCCGCGCACGCATCCGAGCGCGTGCTGTGCCTGCCGATCTACCCGGCGCTGCGCGACGAAGACGTCGAACGAA
TCGTGAAGATCATCAAGGGGCACGTGTGA

Upstream 100 bases:

>100_bases
GGGCGAGCCCGCGATCGCCTTCGACACGCCTCTTTTCGACGATACGGCGACCGCACCGGCCACGACCGAGGCCTGACCTC
CACGCAACAGAGGGATCACC

Downstream 100 bases:

>100_bases
CGTCGCCGGCAACCAGCGGCCTGGCGCGGTCGTCCTCATGCGCTTCCAGCACCATCGCGTTCAGCGCGATTCGCGACCTG
ATCGAGCAGGAACAGGTGCG

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MTASLPASSVAQLPRDSIYVTQPYLPPLDEFIPYLQQIWDSRVLTNGGPFHQQFERALCDYLDVPHLSLFANGTLALVTA
LQALRITGEVITTPYSFVATAHSLLWNGIKPVFVDVDPDSLNLDPAKIEAAITPQTSAIMPVHCYGRPCDVEAIQKIADN
YNLRVIYDAAHAFGVHTPTGSLLRHGDLSILSFHATKVFNTFEGGAIICPDAKTKQRIDHLKNFGFVDEVTVVAPGINGK
MSEINAAFGLLQLQHVDAAIARRAHIDAMYREQLSGLRGLRCIEHGDGVRHNYSYFPILVDDEYPVSRDALYSKLRAHEI
YVRRYFYPLISEFPMYRGLPSAHKSLLPAAAHASERVLCLPIYPALRDEDVERIVKIIKGHV

Sequences:

>Translated_382_residues
MTASLPASSVAQLPRDSIYVTQPYLPPLDEFIPYLQQIWDSRVLTNGGPFHQQFERALCDYLDVPHLSLFANGTLALVTA
LQALRITGEVITTPYSFVATAHSLLWNGIKPVFVDVDPDSLNLDPAKIEAAITPQTSAIMPVHCYGRPCDVEAIQKIADN
YNLRVIYDAAHAFGVHTPTGSLLRHGDLSILSFHATKVFNTFEGGAIICPDAKTKQRIDHLKNFGFVDEVTVVAPGINGK
MSEINAAFGLLQLQHVDAAIARRAHIDAMYREQLSGLRGLRCIEHGDGVRHNYSYFPILVDDEYPVSRDALYSKLRAHEI
YVRRYFYPLISEFPMYRGLPSAHKSLLPAAAHASERVLCLPIYPALRDEDVERIVKIIKGHV
>Mature_381_residues
TASLPASSVAQLPRDSIYVTQPYLPPLDEFIPYLQQIWDSRVLTNGGPFHQQFERALCDYLDVPHLSLFANGTLALVTAL
QALRITGEVITTPYSFVATAHSLLWNGIKPVFVDVDPDSLNLDPAKIEAAITPQTSAIMPVHCYGRPCDVEAIQKIADNY
NLRVIYDAAHAFGVHTPTGSLLRHGDLSILSFHATKVFNTFEGGAIICPDAKTKQRIDHLKNFGFVDEVTVVAPGINGKM
SEINAAFGLLQLQHVDAAIARRAHIDAMYREQLSGLRGLRCIEHGDGVRHNYSYFPILVDDEYPVSRDALYSKLRAHEIY
VRRYFYPLISEFPMYRGLPSAHKSLLPAAAHASERVLCLPIYPALRDEDVERIVKIIKGHV

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=383, Percent_Identity=30.0261096605744, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI2367285, Length=358, Percent_Identity=30.1675977653631, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 42541; Mature: 42410

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASLPASSVAQLPRDSIYVTQPYLPPLDEFIPYLQQIWDSRVLTNGGPFHQQFERALCD
CCCCCCCHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHH
YLDVPHLSLFANGTLALVTALQALRITGEVITTPYSFVATAHSLLWNGIKPVFVDVDPDS
HHCCCCCEECCCCHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCC
LNLDPAKIEAAITPQTSAIMPVHCYGRPCDVEAIQKIADNYNLRVIYDAAHAFGVHTPTG
CCCCHHHEEEEECCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECHHHCCCCCCCC
SLLRHGDLSILSFHATKVFNTFEGGAIICPDAKTKQRIDHLKNFGFVDEVTVVAPGINGK
HHHHCCCCEEEEEHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCCC
MSEINAAFGLLQLQHVDAAIARRAHIDAMYREQLSGLRGLRCIEHGDGVRHNYSYFPILV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEEE
DDEYPVSRDALYSKLRAHEIYVRRYFYPLISEFPMYRGLPSAHKSLLPAAAHASERVLCL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHCCCCCEEEE
PIYPALRDEDVERIVKIIKGHV
ECCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TASLPASSVAQLPRDSIYVTQPYLPPLDEFIPYLQQIWDSRVLTNGGPFHQQFERALCD
CCCCCCHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHH
YLDVPHLSLFANGTLALVTALQALRITGEVITTPYSFVATAHSLLWNGIKPVFVDVDPDS
HHCCCCCEECCCCHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCC
LNLDPAKIEAAITPQTSAIMPVHCYGRPCDVEAIQKIADNYNLRVIYDAAHAFGVHTPTG
CCCCHHHEEEEECCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECHHHCCCCCCCC
SLLRHGDLSILSFHATKVFNTFEGGAIICPDAKTKQRIDHLKNFGFVDEVTVVAPGINGK
HHHHCCCCEEEEEHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCCC
MSEINAAFGLLQLQHVDAAIARRAHIDAMYREQLSGLRGLRCIEHGDGVRHNYSYFPILV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEEE
DDEYPVSRDALYSKLRAHEIYVRRYFYPLISEFPMYRGLPSAHKSLLPAAAHASERVLCL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHCCCCCEEEE
PIYPALRDEDVERIVKIIKGHV
ECCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]