| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688237
Identifier: 116688237
GI number: 116688237
Start: 240900
End: 241487
Strand: Reverse
Name: 116688237
Synonym: Bcen2424_0213
Alternate gene names: NA
Gene position: 241487-240900 (Counterclockwise)
Preceding gene: 116688238
Following gene: 116688236
Centisome position: 6.93
GC content: 55.1
Gene sequence:
>588_bases ATGCTCATCTATCTGAACTTCGATGGTGTTCTTCACCCGAACCATCTCCAGTATCGATATCGCCACTCCCCGGAGTTGCT GTGCCCAAGCCATACGGCCTTCGAGTATGCGCCCGCGCTTGAGAATGCATTTGAAGACTGTCCAGATGCCACCGTCGTGC TCAACACATGGTGGACCTACTATCTCACCGTGGAAGCTTGTCTCCAACTCTTACCCGCATCCATTCGGCCACGGGTAGTA GGCACCACACTCGTGGGTGGAATTCGTGAAGAACCACTGCCCAATCGGGTACGCGAAGCGGAAAGACACATCGGTGTGCC GACAAACGAGCTTTTAGTCCTCGACAACAGCTCCGCCCGATACGGTGAGAGCCTGCTCCCTCAACTGCTGTTGGTCAATG AGGAAACGGGCTTATCGTGCCCCTCGGCAATGAGAGCGCTCAAGAAACGCTTGCACTCCCAATGGAGTCGAGTCGCATCT CACAAAATAGACCAGCGGCCGGTGCCGATTCCATCAATTCAAAATGGGAGGGAAATCCCTGTTCGTCAATGGACGGAGCC CCCACCAGCCAACCATCGAGAAGCGTGA
Upstream 100 bases:
>100_bases CGAGAGAGATAGCCGAGATTGTCGACCGCATCGTGCAGTTGCTGGATGCCGGCGTTGCCGCAATCGATGAGGATTCCGAT TTTCTTGCATAGATGCATGT
Downstream 100 bases:
>100_bases AATTGTCTATATATATTTAGAAAATCGCAATTGTCGACTAAAGTGACAGAGCATTTTCGAATGATATTCTCGCGCCAAAC CGGTATACAAGGAGAAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MLIYLNFDGVLHPNHLQYRYRHSPELLCPSHTAFEYAPALENAFEDCPDATVVLNTWWTYYLTVEACLQLLPASIRPRVV GTTLVGGIREEPLPNRVREAERHIGVPTNELLVLDNSSARYGESLLPQLLLVNEETGLSCPSAMRALKKRLHSQWSRVAS HKIDQRPVPIPSIQNGREIPVRQWTEPPPANHREA
Sequences:
>Translated_195_residues MLIYLNFDGVLHPNHLQYRYRHSPELLCPSHTAFEYAPALENAFEDCPDATVVLNTWWTYYLTVEACLQLLPASIRPRVV GTTLVGGIREEPLPNRVREAERHIGVPTNELLVLDNSSARYGESLLPQLLLVNEETGLSCPSAMRALKKRLHSQWSRVAS HKIDQRPVPIPSIQNGREIPVRQWTEPPPANHREA >Mature_195_residues MLIYLNFDGVLHPNHLQYRYRHSPELLCPSHTAFEYAPALENAFEDCPDATVVLNTWWTYYLTVEACLQLLPASIRPRVV GTTLVGGIREEPLPNRVREAERHIGVPTNELLVLDNSSARYGESLLPQLLLVNEETGLSCPSAMRALKKRLHSQWSRVAS HKIDQRPVPIPSIQNGREIPVRQWTEPPPANHREA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22157; Mature: 22157
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIYLNFDGVLHPNHLQYRYRHSPELLCPSHTAFEYAPALENAFEDCPDATVVLNTWWTY CEEEEECCCEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHH YLTVEACLQLLPASIRPRVVGTTLVGGIREEPLPNRVREAERHIGVPTNELLVLDNSSAR HHHHHHHHHHCCCCCCCEEEHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCH YGESLLPQLLLVNEETGLSCPSAMRALKKRLHSQWSRVASHKIDQRPVPIPSIQNGREIP HHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC VRQWTEPPPANHREA CCCCCCCCCCCCCCC >Mature Secondary Structure MLIYLNFDGVLHPNHLQYRYRHSPELLCPSHTAFEYAPALENAFEDCPDATVVLNTWWTY CEEEEECCCEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHH YLTVEACLQLLPASIRPRVVGTTLVGGIREEPLPNRVREAERHIGVPTNELLVLDNSSAR HHHHHHHHHHCCCCCCCEEEHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCH YGESLLPQLLLVNEETGLSCPSAMRALKKRLHSQWSRVASHKIDQRPVPIPSIQNGREIP HHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC VRQWTEPPPANHREA CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA