| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688238
Identifier: 116688238
GI number: 116688238
Start: 241496
End: 242050
Strand: Reverse
Name: 116688238
Synonym: Bcen2424_0214
Alternate gene names: NA
Gene position: 242050-241496 (Counterclockwise)
Preceding gene: 116688242
Following gene: 116688237
Centisome position: 6.95
GC content: 60.0
Gene sequence:
>555_bases ATGTCCGACCCCGGCGGCTACCGGAACCACCCGACCATGGCTCAAGTCATGTACCTCGGCATCGAGGGCGTCTTGTTTGC GCACCGTCCCGCCGACATTAGACCGCGGTGCTGCCAGCATCAACCGCCGCGCGTCACCCCGTTGCCCCTACTGCCGGCAA TTTCTCGTCTCCTTGCCGGCCTACCAAACGTATGTGTCGTCATCAATTCACGATGGATTTGCGACGTTGGCTATCGAAAC CTCCTGAGTCTGCTCCCCGACGAAATTGCACGCACGACCATCGGCGCGACGATGCCTGGCAATCGCTCACACAGGCGCAG CACTACTGCGTCTCGCATCGACATCCTGCGCGCCGACATACGTCGACGATGTCCGGCTCGTCTCGCCATAGTTGACGCCT CACCGTATGCAGTTCCGTACGAGTACCTGGCTCAAGCGGTGCACGTGACGAAGGCGATGGGCACGAGAGAGATAGCCGAG ATTGTCGACCGCATCGTGCAGTTGCTGGATGCCGGCGTTGCCGCAATCGATGAGGATTCCGATTTTCTTGCATAG
Upstream 100 bases:
>100_bases GGAAGCGCACACGACTCTTTCAAGAAAAGTAAAAGAATCGCCCCCAAAGAGTCCCGTCATTATCGCCCGCCTCTACGAGT TTGGACCGCCTCTCTAGGAT
Downstream 100 bases:
>100_bases ATGCATGTATGCTCATCTATCTGAACTTCGATGGTGTTCTTCACCCGAACCATCTCCAGTATCGATATCGCCACTCCCCG GAGTTGCTGTGCCCAAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSDPGGYRNHPTMAQVMYLGIEGVLFAHRPADIRPRCCQHQPPRVTPLPLLPAISRLLAGLPNVCVVINSRWICDVGYRN LLSLLPDEIARTTIGATMPGNRSHRRSTTASRIDILRADIRRRCPARLAIVDASPYAVPYEYLAQAVHVTKAMGTREIAE IVDRIVQLLDAGVAAIDEDSDFLA
Sequences:
>Translated_184_residues MSDPGGYRNHPTMAQVMYLGIEGVLFAHRPADIRPRCCQHQPPRVTPLPLLPAISRLLAGLPNVCVVINSRWICDVGYRN LLSLLPDEIARTTIGATMPGNRSHRRSTTASRIDILRADIRRRCPARLAIVDASPYAVPYEYLAQAVHVTKAMGTREIAE IVDRIVQLLDAGVAAIDEDSDFLA >Mature_183_residues SDPGGYRNHPTMAQVMYLGIEGVLFAHRPADIRPRCCQHQPPRVTPLPLLPAISRLLAGLPNVCVVINSRWICDVGYRNL LSLLPDEIARTTIGATMPGNRSHRRSTTASRIDILRADIRRRCPARLAIVDASPYAVPYEYLAQAVHVTKAMGTREIAEI VDRIVQLLDAGVAAIDEDSDFLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20290; Mature: 20159
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPGGYRNHPTMAQVMYLGIEGVLFAHRPADIRPRCCQHQPPRVTPLPLLPAISRLLAG CCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHC LPNVCVVINSRWICDVGYRNLLSLLPDEIARTTIGATMPGNRSHRRSTTASRIDILRADI CCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH RRRCPARLAIVDASPYAVPYEYLAQAVHVTKAMGTREIAEIVDRIVQLLDAGVAAIDEDS HHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHCCCCCC DFLA CCCC >Mature Secondary Structure SDPGGYRNHPTMAQVMYLGIEGVLFAHRPADIRPRCCQHQPPRVTPLPLLPAISRLLAG CCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHC LPNVCVVINSRWICDVGYRNLLSLLPDEIARTTIGATMPGNRSHRRSTTASRIDILRADI CCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH RRRCPARLAIVDASPYAVPYEYLAQAVHVTKAMGTREIAEIVDRIVQLLDAGVAAIDEDS HHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHCCCCCC DFLA CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA