| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688226
Identifier: 116688226
GI number: 116688226
Start: 222369
End: 223451
Strand: Reverse
Name: 116688226
Synonym: Bcen2424_0202
Alternate gene names: NA
Gene position: 223451-222369 (Counterclockwise)
Preceding gene: 116688227
Following gene: 116688225
Centisome position: 6.41
GC content: 67.77
Gene sequence:
>1083_bases ATGAGCGCAACGCCACGCTGGGCGATCGCGATGGCGGCAGGTGCAACGGGAACCGCGTTGTGTCTTTCGACGATTGCAGG CTGGCAACGGGGCGGCTCGCTGTCCGAGCGCGTCGTATGGGTGGCAATGGGTGTCGTGCTGATCGTCAGCGCGCACCTGT TGCCCACCCTCGTACGCAGCTCGCCCTTCACGATCCGGATCACAGGTAGCGTGTTATGGGGAGCCTGCATGGTCACCGCC TGCATCGGGCACGTGACCTTCTTCCTGTTCGCCCAGCAGCACGCAGGTGAAGCCCGGGCGTCCGCCGTGACTAGGAACGT CGCCGCCAGCCCCGCACTTGCCTCACGGACCCTGACCGCTGTCATGCAGGAGGGGGCCGCCGTTACGCGTCAGCTTGCGC TCGCGCGGGCACAGCGCTGTTCGCGTGACTGTCCGTTTCTGGACGCGAGACGGGTCACGCTCGCCGCGCGACTCGACGCG CTTGAGGCCGAAGCGGACGACATCCGGCGACAGGATTCGGAGCGTGACCGTACCCGGTCGCAGCGTGACGCATTACTCGC CGATCCGGTCACGTCGCGACTGGCTGCGTTACTCGGTACGACAACCGCGCGCGTCGATCTGCTCTCGGGGGTGACGTTCG CCGCGGTACTCGAAGGTGTTGCCTGCCTGCTGTGGACCGTCGCGCTGCGACCATTACCGCTCCCGCACGCGACAGCAGCA GTCACGGGTACGGTAGCGCCGGGAGTCACGCCTGACATAAACGTGACTGAAGCGGCACCGCCTGCCGTCACGTCATCAGT CACGACCGCGCCCGTACGTCGTGGCAACGCGAGCGCCCGTCGCAAGACCGGATCTCGCAGTCGCGACGGTCCGGACGGCA GTCAGGCAACGCGCACCGAGTATCGCGCTCCGCCGTTACTGGAGACTGATGGCGCCGACGATGCCCTGACCCGGCTCGCC CGGGACATCGACGCGGGTCGGGTGCGTCCCACGGTCGCCGGCATCCGCAGTCACCTCGGCTGCTCGCAGTCACGGGCCGC CTCGCTACGCCGCCAGCTCGCCGTGCTTTCCCCGACGGCATAA
Upstream 100 bases:
>100_bases CCGTCGCAGGAAGCGGGACGACAGTCTCCCGAACAGACGGCTCGGCGACGCTGCGCCAGAAGCTCGAACGCAAGGCAATG CCGCTTGGAGGAGCAGCCGC
Downstream 100 bases:
>100_bases GCCGGGCTCGCGCCCGGCGATCCGCTTTTCCATTCCCTTCACAGCAAACACATCCGGTTCTGCCGGAGGTTCGCGCTCGC CCTTTTCTGGAGGCAGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MSATPRWAIAMAAGATGTALCLSTIAGWQRGGSLSERVVWVAMGVVLIVSAHLLPTLVRSSPFTIRITGSVLWGACMVTA CIGHVTFFLFAQQHAGEARASAVTRNVAASPALASRTLTAVMQEGAAVTRQLALARAQRCSRDCPFLDARRVTLAARLDA LEAEADDIRRQDSERDRTRSQRDALLADPVTSRLAALLGTTTARVDLLSGVTFAAVLEGVACLLWTVALRPLPLPHATAA VTGTVAPGVTPDINVTEAAPPAVTSSVTTAPVRRGNASARRKTGSRSRDGPDGSQATRTEYRAPPLLETDGADDALTRLA RDIDAGRVRPTVAGIRSHLGCSQSRAASLRRQLAVLSPTA
Sequences:
>Translated_360_residues MSATPRWAIAMAAGATGTALCLSTIAGWQRGGSLSERVVWVAMGVVLIVSAHLLPTLVRSSPFTIRITGSVLWGACMVTA CIGHVTFFLFAQQHAGEARASAVTRNVAASPALASRTLTAVMQEGAAVTRQLALARAQRCSRDCPFLDARRVTLAARLDA LEAEADDIRRQDSERDRTRSQRDALLADPVTSRLAALLGTTTARVDLLSGVTFAAVLEGVACLLWTVALRPLPLPHATAA VTGTVAPGVTPDINVTEAAPPAVTSSVTTAPVRRGNASARRKTGSRSRDGPDGSQATRTEYRAPPLLETDGADDALTRLA RDIDAGRVRPTVAGIRSHLGCSQSRAASLRRQLAVLSPTA >Mature_359_residues SATPRWAIAMAAGATGTALCLSTIAGWQRGGSLSERVVWVAMGVVLIVSAHLLPTLVRSSPFTIRITGSVLWGACMVTAC IGHVTFFLFAQQHAGEARASAVTRNVAASPALASRTLTAVMQEGAAVTRQLALARAQRCSRDCPFLDARRVTLAARLDAL EAEADDIRRQDSERDRTRSQRDALLADPVTSRLAALLGTTTARVDLLSGVTFAAVLEGVACLLWTVALRPLPLPHATAAV TGTVAPGVTPDINVTEAAPPAVTSSVTTAPVRRGNASARRKTGSRSRDGPDGSQATRTEYRAPPLLETDGADDALTRLAR DIDAGRVRPTVAGIRSHLGCSQSRAASLRRQLAVLSPTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37738; Mature: 37606
Theoretical pI: Translated: 11.44; Mature: 11.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATPRWAIAMAAGATGTALCLSTIAGWQRGGSLSERVVWVAMGVVLIVSAHLLPTLVRS CCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC SPFTIRITGSVLWGACMVTACIGHVTFFLFAQQHAGEARASAVTRNVAASPALASRTLTA CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHH VMQEGAAVTRQLALARAQRCSRDCPFLDARRVTLAARLDALEAEADDIRRQDSERDRTRS HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHH QRDALLADPVTSRLAALLGTTTARVDLLSGVTFAAVLEGVACLLWTVALRPLPLPHATAA HHHHHHHCHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH VTGTVAPGVTPDINVTEAAPPAVTSSVTTAPVRRGNASARRKTGSRSRDGPDGSQATRTE EECCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHH YRAPPLLETDGADDALTRLARDIDAGRVRPTVAGIRSHLGCSQSRAASLRRQLAVLSPTA CCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SATPRWAIAMAAGATGTALCLSTIAGWQRGGSLSERVVWVAMGVVLIVSAHLLPTLVRS CCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC SPFTIRITGSVLWGACMVTACIGHVTFFLFAQQHAGEARASAVTRNVAASPALASRTLTA CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHH VMQEGAAVTRQLALARAQRCSRDCPFLDARRVTLAARLDALEAEADDIRRQDSERDRTRS HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHH QRDALLADPVTSRLAALLGTTTARVDLLSGVTFAAVLEGVACLLWTVALRPLPLPHATAA HHHHHHHCHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH VTGTVAPGVTPDINVTEAAPPAVTSSVTTAPVRRGNASARRKTGSRSRDGPDGSQATRTE EECCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHH YRAPPLLETDGADDALTRLARDIDAGRVRPTVAGIRSHLGCSQSRAASLRRQLAVLSPTA CCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA