| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688225
Identifier: 116688225
GI number: 116688225
Start: 221516
End: 221899
Strand: Reverse
Name: 116688225
Synonym: Bcen2424_0201
Alternate gene names: NA
Gene position: 221899-221516 (Counterclockwise)
Preceding gene: 116688226
Following gene: 116688224
Centisome position: 6.37
GC content: 64.58
Gene sequence:
>384_bases ATGAATCACCACACACGACTCAAGCCACTTTTCCATCCCGGCAAACTACTCGTCTCGCCCGCCGCCCTCGTAGCGCTGCG CGCCAATGGCGTCCCCGTCATCAGCGTCGTGCTGCGTCACATCTGCGGCGACTGGGGCTCAGTCTCTGAGAGCGACCGCG AACAGAACGACCTGTCGATCACGACCGGTCTGCGGCTGCTTTCCCTCTATCACCTGCCCGATGGCAGCCGGATCTTCGTG ACCACGGCGTGGGACCGGTCGAACACGACGATCGAAAAGCTCGACGAAGGCCCAGCAGACCGCGAAGCCCGTCCCGCGTC GATGCCGGGCCGTCGCCGTCCGGTCTGGTCCGTCTTCAACTGCCTGCAGGGAGCCTGCGCATGA
Upstream 100 bases:
>100_bases GTCCTGACGCCGGCACACGTTGCCGGCCCCCCGCCGTTCCCGCCAGCACGCATCCGACCCGTTCCGGAGGGGCGCGCTCG TCCGTTTCCAGGAGAAGAAG
Downstream 100 bases:
>100_bases ACGCCCGCGCCCGAAACGCAGCGCGTTTCCCGATCGGCCGGGCGCTCATCACTCCGGGTGCCCAGGCCGCGCTTGACTCG GAAGGCATCCCGGTTCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Adenine-Specific DNA Methylase
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MNHHTRLKPLFHPGKLLVSPAALVALRANGVPVISVVLRHICGDWGSVSESDREQNDLSITTGLRLLSLYHLPDGSRIFV TTAWDRSNTTIEKLDEGPADREARPASMPGRRRPVWSVFNCLQGACA
Sequences:
>Translated_127_residues MNHHTRLKPLFHPGKLLVSPAALVALRANGVPVISVVLRHICGDWGSVSESDREQNDLSITTGLRLLSLYHLPDGSRIFV TTAWDRSNTTIEKLDEGPADREARPASMPGRRRPVWSVFNCLQGACA >Mature_127_residues MNHHTRLKPLFHPGKLLVSPAALVALRANGVPVISVVLRHICGDWGSVSESDREQNDLSITTGLRLLSLYHLPDGSRIFV TTAWDRSNTTIEKLDEGPADREARPASMPGRRRPVWSVFNCLQGACA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13994; Mature: 13994
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHHTRLKPLFHPGKLLVSPAALVALRANGVPVISVVLRHICGDWGSVSESDREQNDLSI CCCCCCCCCCCCCCCEEECHHHEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEH TTGLRLLSLYHLPDGSRIFVTTAWDRSNTTIEKLDEGPADREARPASMPGRRRPVWSVFN HHHHHHHHHEECCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH CLQGACA HHHHCCC >Mature Secondary Structure MNHHTRLKPLFHPGKLLVSPAALVALRANGVPVISVVLRHICGDWGSVSESDREQNDLSI CCCCCCCCCCCCCCCEEECHHHEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEH TTGLRLLSLYHLPDGSRIFVTTAWDRSNTTIEKLDEGPADREARPASMPGRRRPVWSVFN HHHHHHHHHEECCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH CLQGACA HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA