| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688188
Identifier: 116688188
GI number: 116688188
Start: 182532
End: 183452
Strand: Reverse
Name: 116688188
Synonym: Bcen2424_0164
Alternate gene names: NA
Gene position: 183452-182532 (Counterclockwise)
Preceding gene: 116688189
Following gene: 116688180
Centisome position: 5.27
GC content: 60.8
Gene sequence:
>921_bases ATGAATACCAAGTTGATGGCGAAACTCGCGGGCGCCTGCGTGATCGCGGCAGCCGTTGCCGCTCCGGCGCACGCATTCGA AGGCGACGTGGCACCGTACCCGGCCGGCGCGAACGGTTCGGCGATCGCTTCGATGCCGCCCATTCCCGGACTGTTCGTGA TGCAGCAATTCAACTACAGCTTCGCCAATGGGCTCTACGGCAACGACGGTCAGAAGCTGCCGATTCCGTTCCATACCTCG GTGTTCTCGTCCACCACCCGGCTGCTCGCCGCCTATCCGGCCACCGTGCTCGGCGCGAATCTCTACTCGCAACTGGTGAT TCCGGTGGTTTCGCTGCACACGGACGTACAGGGCTACAAGTCGACGCAAAACGGCCTGTCCAACATCACGGTGACGCCGG TCCTGCTCAGATGGTCAGTGAACAATCTCGCGATCGCGACCGGCGTCGACCTCGCGTTGCCCACCGGCTCGTACAGCCCG ACCAAATCCAGCAGCGTCGCGGTCGGCTACCTGTCGGTGCAGCCGGTGCTGTCGTTTCGCTACAGAGTGCCGGACGGCAT CGATCTCGGCATCTCCAATCGCCTGCTGCTCAACCAGAAGAACAGCGACACCAACTATCAATCGGGCAACGGCTATACCG CGGAATTCATCGCCGGCTGGCACTTCGGCAAGTTCGAATTCGGTGTGCTGGGCAACTACGTGAATCAGTTCAGCGACGAC AAGGTCAACGGCGTGGCGGTCAATGGCAACGGCAACCGGATGCGCAGCTTAGCGCTGGGCCCGTCGATCGACTACCAGGC GGGTCCGGTCAACATCAACCTGAACTACCAGCATGGTCTCTATGCAGTGAATACGAGCAAAAGCCACAACGTCTGGCTGA ATGTCGCGATTCCGTTGTGGGTCCTCGGCGGCGACAAGTAA
Upstream 100 bases:
>100_bases ATAATCTAGCAGACCCCATCCCAACCACAACGTAGAAGGAGGCTCAGCGCTTTACGAGCCGACCTTGCAAACGCAAAAAA TACCAAACCCAAGAGACACT
Downstream 100 bases:
>100_bases CGAGGCGGCGGTACACGCCGCCGGGCGATGTCACGGCAGCCCGCATCGGGTTTCTTCAAACTATTGCGCGGCCAGCCCGG CGGCCACCGAGATTATCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MNTKLMAKLAGACVIAAAVAAPAHAFEGDVAPYPAGANGSAIASMPPIPGLFVMQQFNYSFANGLYGNDGQKLPIPFHTS VFSSTTRLLAAYPATVLGANLYSQLVIPVVSLHTDVQGYKSTQNGLSNITVTPVLLRWSVNNLAIATGVDLALPTGSYSP TKSSSVAVGYLSVQPVLSFRYRVPDGIDLGISNRLLLNQKNSDTNYQSGNGYTAEFIAGWHFGKFEFGVLGNYVNQFSDD KVNGVAVNGNGNRMRSLALGPSIDYQAGPVNINLNYQHGLYAVNTSKSHNVWLNVAIPLWVLGGDK
Sequences:
>Translated_306_residues MNTKLMAKLAGACVIAAAVAAPAHAFEGDVAPYPAGANGSAIASMPPIPGLFVMQQFNYSFANGLYGNDGQKLPIPFHTS VFSSTTRLLAAYPATVLGANLYSQLVIPVVSLHTDVQGYKSTQNGLSNITVTPVLLRWSVNNLAIATGVDLALPTGSYSP TKSSSVAVGYLSVQPVLSFRYRVPDGIDLGISNRLLLNQKNSDTNYQSGNGYTAEFIAGWHFGKFEFGVLGNYVNQFSDD KVNGVAVNGNGNRMRSLALGPSIDYQAGPVNINLNYQHGLYAVNTSKSHNVWLNVAIPLWVLGGDK >Mature_306_residues MNTKLMAKLAGACVIAAAVAAPAHAFEGDVAPYPAGANGSAIASMPPIPGLFVMQQFNYSFANGLYGNDGQKLPIPFHTS VFSSTTRLLAAYPATVLGANLYSQLVIPVVSLHTDVQGYKSTQNGLSNITVTPVLLRWSVNNLAIATGVDLALPTGSYSP TKSSSVAVGYLSVQPVLSFRYRVPDGIDLGISNRLLLNQKNSDTNYQSGNGYTAEFIAGWHFGKFEFGVLGNYVNQFSDD KVNGVAVNGNGNRMRSLALGPSIDYQAGPVNINLNYQHGLYAVNTSKSHNVWLNVAIPLWVLGGDK
Specific function: Unknown
COG id: COG4313
COG function: function code C; Protein involved in meta-pathway of phenol degradation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32503; Mature: 32503
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKLMAKLAGACVIAAAVAAPAHAFEGDVAPYPAGANGSAIASMPPIPGLFVMQQFNYS CCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCH FANGLYGNDGQKLPIPFHTSVFSSTTRLLAAYPATVLGANLYSQLVIPVVSLHTDVQGYK HHCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCH STQNGLSNITVTPVLLRWSVNNLAIATGVDLALPTGSYSPTKSSSVAVGYLSVQPVLSFR HHHCCCCCEEEEEEEEEEECCCEEEEECCEEEECCCCCCCCCCCCEEEEEEEECEEEEEE YRVPDGIDLGISNRLLLNQKNSDTNYQSGNGYTAEFIAGWHFGKFEFGVLGNYVNQFSDD ECCCCCCEECCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCEEHHHHHHHHHHCCCC KVNGVAVNGNGNRMRSLALGPSIDYQAGPVNINLNYQHGLYAVNTSKSHNVWLNVAIPLW CCCEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEECCCEEEEECCCCCCEEEEEEEEEE VLGGDK EEECCC >Mature Secondary Structure MNTKLMAKLAGACVIAAAVAAPAHAFEGDVAPYPAGANGSAIASMPPIPGLFVMQQFNYS CCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCH FANGLYGNDGQKLPIPFHTSVFSSTTRLLAAYPATVLGANLYSQLVIPVVSLHTDVQGYK HHCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCH STQNGLSNITVTPVLLRWSVNNLAIATGVDLALPTGSYSPTKSSSVAVGYLSVQPVLSFR HHHCCCCCEEEEEEEEEEECCCEEEEECCEEEECCCCCCCCCCCCEEEEEEEECEEEEEE YRVPDGIDLGISNRLLLNQKNSDTNYQSGNGYTAEFIAGWHFGKFEFGVLGNYVNQFSDD ECCCCCCEECCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCEEHHHHHHHHHHCCCC KVNGVAVNGNGNRMRSLALGPSIDYQAGPVNINLNYQHGLYAVNTSKSHNVWLNVAIPLW CCCEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEECCCEEEEECCCCCCEEEEEEEEEE VLGGDK EEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA