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The map label for this gene is bphR [H]

Identifier: 116688180

GI number: 116688180

Start: 174096

End: 174821

Strand: Reverse

Name: bphR [H]

Synonym: Bcen2424_0156

Alternate gene names: 116688180

Gene position: 174821-174096 (Counterclockwise)

Preceding gene: 116688188

Following gene: 116688179

Centisome position: 5.02

GC content: 65.43

Gene sequence:

>726_bases
TTGTCCCGCATCGTGGCTAATCAAGCTGCGCCCAATGGCTCAGGCGGCGCGAGCGTCGCGACCCTGGCAACGAACCTGTA
CGACCGCATCCGCGCCGACCTGCTCGACGGCAAGCTCGAACCGGGGCGGAAGCTCCAGATCGAATTCCTGTGCGACCACT
ATCAGGCCGGCCAGACGCCGGTGCGCGAGGCGCTCAACCGGCTCACCTCCGACGGCCTCGTCGAGCGGCGTGACCAGCGC
GGCTTCGCGGTCGCCGGCATCAGCGCGAGCGACCTGCGCGAAATCACGAAAACGCGCTGCTGGCTCGAAGAAGTCGCGTT
GCGCGAGGCTTTCGCGAGCCGCTCGACGGAATGGGAAGAGGATGTCGTGCTCGCGTATCACCGGCTCTCCAAAGTGCCGC
GTTCGCTGAGCGAGACCGAATACAAGGAGAACCCCGAGTGGGAGCGGCGTCACCGCGAGTTTCATCGCGCGGTGATCGGC
GGCTGCCAGTCGCGCTGGCTCATCAACTTCTGTGAGCAGCTTGCGGATCAGCTTTATCGCTATCGCCAGTTGTCGGTGCG
GCGCGTGTTCCCCAAGCGGCATGAAGGCGCCGAGCACAAGGAGATTCTCGACGCGGTCGTCGCTGGCGACGCCGCCCGCG
CCATCCAGCTTCTCACCACGCACTATCAGCAAACCGCCGACATCATTCTCGGCGACGTCAATCTGTTCCCGCCCGGCGCT
CGCTAG

Upstream 100 bases:

>100_bases
TGTATTCATTCAGGGAAAACCCCATTACCATCGTTTGCGCAGTCCCCCATAGCGGATCGGATATACTTCGTCGCAGATCG
AATCATTGAGAGGTGTGAAC

Downstream 100 bases:

>100_bases
GCCCATTCCCACGTTTCCTGTCCCGCCGCCGCTCCATTCTGTAGCGCGGCGGCGTTCGCTCGTTCCCGCCTTTCACGTCG
CCAGCCTATACACAACCTGG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSRIVANQAAPNGSGGASVATLATNLYDRIRADLLDGKLEPGRKLQIEFLCDHYQAGQTPVREALNRLTSDGLVERRDQR
GFAVAGISASDLREITKTRCWLEEVALREAFASRSTEWEEDVVLAYHRLSKVPRSLSETEYKENPEWERRHREFHRAVIG
GCQSRWLINFCEQLADQLYRYRQLSVRRVFPKRHEGAEHKEILDAVVAGDAARAIQLLTTHYQQTADIILGDVNLFPPGA
R

Sequences:

>Translated_241_residues
MSRIVANQAAPNGSGGASVATLATNLYDRIRADLLDGKLEPGRKLQIEFLCDHYQAGQTPVREALNRLTSDGLVERRDQR
GFAVAGISASDLREITKTRCWLEEVALREAFASRSTEWEEDVVLAYHRLSKVPRSLSETEYKENPEWERRHREFHRAVIG
GCQSRWLINFCEQLADQLYRYRQLSVRRVFPKRHEGAEHKEILDAVVAGDAARAIQLLTTHYQQTADIILGDVNLFPPGA
R
>Mature_240_residues
SRIVANQAAPNGSGGASVATLATNLYDRIRADLLDGKLEPGRKLQIEFLCDHYQAGQTPVREALNRLTSDGLVERRDQRG
FAVAGISASDLREITKTRCWLEEVALREAFASRSTEWEEDVVLAYHRLSKVPRSLSETEYKENPEWERRHREFHRAVIGG
CQSRWLINFCEQLADQLYRYRQLSVRRVFPKRHEGAEHKEILDAVVAGDAARAIQLLTTHYQQTADIILGDVNLFPPGAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082149, Length=209, Percent_Identity=33.4928229665072, Blast_Score=115, Evalue=3e-27,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 27383; Mature: 27252

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIVANQAAPNGSGGASVATLATNLYDRIRADLLDGKLEPGRKLQIEFLCDHYQAGQTP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCH
VREALNRLTSDGLVERRDQRGFAVAGISASDLREITKTRCWLEEVALREAFASRSTEWEE
HHHHHHHHHHCHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
DVVLAYHRLSKVPRSLSETEYKENPEWERRHREFHRAVIGGCQSRWLINFCEQLADQLYR
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
YRQLSVRRVFPKRHEGAEHKEILDAVVAGDAARAIQLLTTHYQQTADIILGDVNLFPPGA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC
R
C
>Mature Secondary Structure 
SRIVANQAAPNGSGGASVATLATNLYDRIRADLLDGKLEPGRKLQIEFLCDHYQAGQTP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCH
VREALNRLTSDGLVERRDQRGFAVAGISASDLREITKTRCWLEEVALREAFASRSTEWEE
HHHHHHHHHHCHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
DVVLAYHRLSKVPRSLSETEYKENPEWERRHREFHRAVIGGCQSRWLINFCEQLADQLYR
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
YRQLSVRRVFPKRHEGAEHKEILDAVVAGDAARAIQLLTTHYQQTADIILGDVNLFPPGA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1569021 [H]