Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688173

Identifier: 116688173

GI number: 116688173

Start: 163959

End: 164666

Strand: Reverse

Name: 116688173

Synonym: Bcen2424_0149

Alternate gene names: NA

Gene position: 164666-163959 (Counterclockwise)

Preceding gene: 116688175

Following gene: 116688172

Centisome position: 4.73

GC content: 75.56

Gene sequence:

>708_bases
ATGGGATACCCGTTCGCCACCGCTGCTCTCGGCCCGCTGCTGTTCGCACAAGGGCGCTACGTGCGCCGCGTCACACCGCG
GCTGCCCGAGGCGGCCGGCCCGCGCGACGGCGTGGCCGGGGACGGTCCGCCGCTGCGCGTGCTGGTGGTCGGCGATTCGG
CCGCCGCGGGCGTCGGGGTCGCGACGCAGCACGATGCGCTCGCCGGGCAACTGGCGAACGCGCTGGCGGCCACGCATCGC
GTGCATTGGAAACTGCTCGCGCGCACCGGCCTGACCACGCGGGAGCTGGTCGACTGGCTCGCCGCGGAGCCGGCCGAGCC
GTTCGACGTGGCCGTGACGTCGCTCGGCGTCAACGACGTGACGGGCGGCGTGCCGCCCGCACGCTGGCTCGCGCAGCAGG
CCGAGCTGGTGCGGCTGCTCGCCACGCGTTTCCAGGTCGGGCACGCGATCCTGTCGGCAGTGCCGCCGATGGAGCGCTTC
CCGGCGCTGCCGCAACCGCTCGCGTGGTATCTGGGGCGGCGCGCGAAGCGGCTCAACGCGGCGCTCGCCGGCTGGGCTGG
CGGGCAACCGCACTGCACGTTCCTGCGGGTCGACCTGCCGCTCGAACGCCACTTGATGGCCGCCGACGGCTTCCATCCCG
GCACAGCCGCGTGCGCGGTGTGGGCCGCACAGGTCGCGGCCGCCGTGCGGCAGCGGCCGGGCGGATGA

Upstream 100 bases:

>100_bases
CGGGCCCTGTTCGCGCTGCGATCGGACACAATATGCACTCCCCCGGCGGCACCCGCGCCGGCCCGCTTCAATGCGTTTCA
ACCACCGCAGGATCGACCTC

Downstream 100 bases:

>100_bases
TGGGGCACGTTCGGGGGCTGACTGCCGCCACGGCTTGCCGGGGGTTGGGAGCCGGGAGCCGGGAGCCGGGAGCCGGGAGC
CGGGAGCCGGGAGCCGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: GDSL-Like Lipase/Acylhydrolase Domain-Containing Protein; GDSL-Like Lipase/Acylhydrolase; GDSL Family Lipase; SGNH Hydrolase; Lysophospholipase; Lysophospholipase L1 And Related Esterase-Like Protein; Lipolytic Protein G-D-S-L Family; G-D-S-L Lipolytic Protein

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MGYPFATAALGPLLFAQGRYVRRVTPRLPEAAGPRDGVAGDGPPLRVLVVGDSAAAGVGVATQHDALAGQLANALAATHR
VHWKLLARTGLTTRELVDWLAAEPAEPFDVAVTSLGVNDVTGGVPPARWLAQQAELVRLLATRFQVGHAILSAVPPMERF
PALPQPLAWYLGRRAKRLNAALAGWAGGQPHCTFLRVDLPLERHLMAADGFHPGTAACAVWAAQVAAAVRQRPGG

Sequences:

>Translated_235_residues
MGYPFATAALGPLLFAQGRYVRRVTPRLPEAAGPRDGVAGDGPPLRVLVVGDSAAAGVGVATQHDALAGQLANALAATHR
VHWKLLARTGLTTRELVDWLAAEPAEPFDVAVTSLGVNDVTGGVPPARWLAQQAELVRLLATRFQVGHAILSAVPPMERF
PALPQPLAWYLGRRAKRLNAALAGWAGGQPHCTFLRVDLPLERHLMAADGFHPGTAACAVWAAQVAAAVRQRPGG
>Mature_234_residues
GYPFATAALGPLLFAQGRYVRRVTPRLPEAAGPRDGVAGDGPPLRVLVVGDSAAAGVGVATQHDALAGQLANALAATHRV
HWKLLARTGLTTRELVDWLAAEPAEPFDVAVTSLGVNDVTGGVPPARWLAQQAELVRLLATRFQVGHAILSAVPPMERFP
ALPQPLAWYLGRRAKRLNAALAGWAGGQPHCTFLRVDLPLERHLMAADGFHPGTAACAVWAAQVAAAVRQRPGG

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24719; Mature: 24588

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYPFATAALGPLLFAQGRYVRRVTPRLPEAAGPRDGVAGDGPPLRVLVVGDSAAAGVGV
CCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
ATQHDALAGQLANALAATHRVHWKLLARTGLTTRELVDWLAAEPAEPFDVAVTSLGVNDV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHCCCHHC
TGGVPPARWLAQQAELVRLLATRFQVGHAILSAVPPMERFPALPQPLAWYLGRRAKRLNA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHH
ALAGWAGGQPHCTFLRVDLPLERHLMAADGFHPGTAACAVWAAQVAAAVRQRPGG
HHHCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GYPFATAALGPLLFAQGRYVRRVTPRLPEAAGPRDGVAGDGPPLRVLVVGDSAAAGVGV
CCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
ATQHDALAGQLANALAATHRVHWKLLARTGLTTRELVDWLAAEPAEPFDVAVTSLGVNDV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHCCCHHC
TGGVPPARWLAQQAELVRLLATRFQVGHAILSAVPPMERFPALPQPLAWYLGRRAKRLNA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHH
ALAGWAGGQPHCTFLRVDLPLERHLMAADGFHPGTAACAVWAAQVAAAVRQRPGG
HHHCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA