Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116688161

Identifier: 116688161

GI number: 116688161

Start: 149835

End: 150926

Strand: Reverse

Name: 116688161

Synonym: Bcen2424_0137

Alternate gene names: NA

Gene position: 150926-149835 (Counterclockwise)

Preceding gene: 116688162

Following gene: 116688157

Centisome position: 4.33

GC content: 72.53

Gene sequence:

>1092_bases
ATGACGGTGGCCAGGCATATCGCGCCGCCCGTCGCCGCGCTGTCGCACGACGACGCGCTGGCGTACCCCGGCACGCTGCT
CGCGCCCGACGGCACGCTCGTCGCGCCGTACGACCTCGAGCATGGCGAACGGGCCGAAGGCCATGCGGCGGCCGCGCCCG
CGCTCGGCATGCTGCATGCCGCGCACCGGCCGTTCCGGCTCGATTACAGTGAGGCGCGGCACGTACACGTGATCAACGGG
ATGGGGGTCACGCTCGGCGATTCGGTGATCGGACTGACGGCCCTCGCCGCGCTGCGAGCGGCCCATGCGGACGTACGCTT
CACGCTGTACCGGCCGGCGCGCGCGCCGCGCTATGTCGACGCGCTGTATGCGCTCGCGACCGACGTGGTCGCGCCGTCGC
GCGCGCTGCCGTGCCCCGCCGACGCGCTACCCGCCGATGCGCACTGCATCGACGTCGGCAATCACCTGTACTGGCCGGCG
TTCGCGCGGCTGCCGATGATCGATTTCTTCCTCGACGCGCTCGGCGTCGATCCGGCCGCCGTGCCGGCCGCCGCGAAGCG
CAATCGCTGGCTCGCGCGGCTGCCGCTGCCCGCACTGCCGGCTGAATGGCAGCGGCCGTACGTGCTGTTCTGCCCGAATG
CGAGCACCGCGGTGCGCAGCGTGCCGCCCGCGTTGTGCGTCGCGTTCGTGGAACGGCTCGCGCAGCGTTACGGGCTGCCG
GTCGTCGGCTTCGGTCCGCTCGCGCATCCGGCTTACGTGGACGTGAGCCGCGACGCGACCGACACCGCACGCTTCATCGC
GTGGATCAAGGGCGCGAGCGTGCTGTTCGCACCGGACACGGCGGCCCTGCATCTCGCCGACGGTTTCGACGTGCCGACGC
TCGCGTGCTTCACGACGATCGGGCCGGCGCTGCGCGTGCGCGACTATCCGCATTGCGTGCCGGTCGCGCTCGACGTGCCG
GCCGAATTGCACGGGCTGCATCGCAGCGAGCGACCGGATGATCTGGCGGCGGTCGAAGCCGCTTACCGCGCCATCGACTG
GGACGCGCTGGCGTGGCCCGCGGCGCGCGACGTGGCAGCGCCGGCCATCTGA

Upstream 100 bases:

>100_bases
GATTGCCCGCGGTGATCGAGATCCGCATCCCGCAGGACGCCAGCACGCCGGCCGCGACGCTCGAACAGATCCGCGAGCAG
GGCCGCCGCGCGCGCGGCGC

Downstream 100 bases:

>100_bases
GCGAAGCGGGCGCAGCGGCGAGCGGAACGATCAAGCCGGCAGCGACACGCGCACAGCGCCAGCCCCGGCGCGATCGTCGC
GTCGGCTTACCTCGGCAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MTVARHIAPPVAALSHDDALAYPGTLLAPDGTLVAPYDLEHGERAEGHAAAAPALGMLHAAHRPFRLDYSEARHVHVING
MGVTLGDSVIGLTALAALRAAHADVRFTLYRPARAPRYVDALYALATDVVAPSRALPCPADALPADAHCIDVGNHLYWPA
FARLPMIDFFLDALGVDPAAVPAAAKRNRWLARLPLPALPAEWQRPYVLFCPNASTAVRSVPPALCVAFVERLAQRYGLP
VVGFGPLAHPAYVDVSRDATDTARFIAWIKGASVLFAPDTAALHLADGFDVPTLACFTTIGPALRVRDYPHCVPVALDVP
AELHGLHRSERPDDLAAVEAAYRAIDWDALAWPAARDVAAPAI

Sequences:

>Translated_363_residues
MTVARHIAPPVAALSHDDALAYPGTLLAPDGTLVAPYDLEHGERAEGHAAAAPALGMLHAAHRPFRLDYSEARHVHVING
MGVTLGDSVIGLTALAALRAAHADVRFTLYRPARAPRYVDALYALATDVVAPSRALPCPADALPADAHCIDVGNHLYWPA
FARLPMIDFFLDALGVDPAAVPAAAKRNRWLARLPLPALPAEWQRPYVLFCPNASTAVRSVPPALCVAFVERLAQRYGLP
VVGFGPLAHPAYVDVSRDATDTARFIAWIKGASVLFAPDTAALHLADGFDVPTLACFTTIGPALRVRDYPHCVPVALDVP
AELHGLHRSERPDDLAAVEAAYRAIDWDALAWPAARDVAAPAI
>Mature_362_residues
TVARHIAPPVAALSHDDALAYPGTLLAPDGTLVAPYDLEHGERAEGHAAAAPALGMLHAAHRPFRLDYSEARHVHVINGM
GVTLGDSVIGLTALAALRAAHADVRFTLYRPARAPRYVDALYALATDVVAPSRALPCPADALPADAHCIDVGNHLYWPAF
ARLPMIDFFLDALGVDPAAVPAAAKRNRWLARLPLPALPAEWQRPYVLFCPNASTAVRSVPPALCVAFVERLAQRYGLPV
VGFGPLAHPAYVDVSRDATDTARFIAWIKGASVLFAPDTAALHLADGFDVPTLACFTTIGPALRVRDYPHCVPVALDVPA
ELHGLHRSERPDDLAAVEAAYRAIDWDALAWPAARDVAAPAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38737; Mature: 38605

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVARHIAPPVAALSHDDALAYPGTLLAPDGTLVAPYDLEHGERAEGHAAAAPALGMLHA
CCCCHHHCCCHHHCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHH
AHRPFRLDYSEARHVHVINGMGVTLGDSVIGLTALAALRAAHADVRFTLYRPARAPRYVD
CCCCEEECHHHCCEEEEEECCCEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH
ALYALATDVVAPSRALPCPADALPADAHCIDVGNHLYWPAFARLPMIDFFLDALGVDPAA
HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEECHHHHHHHHHHHHHHHHCCCHHH
VPAAAKRNRWLARLPLPALPAEWQRPYVLFCPNASTAVRSVPPALCVAFVERLAQRYGLP
CCCHHHHCCEEEECCCCCCCCCCCCCEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHCCC
VVGFGPLAHPAYVDVSRDATDTARFIAWIKGASVLFAPDTAALHLADGFDVPTLACFTTI
EEECCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCHHHHHHHHC
GPALRVRDYPHCVPVALDVPAELHGLHRSERPDDLAAVEAAYRAIDWDALAWPAARDVAA
CCHHEECCCCCEEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHCCCCHHCCCC
PAI
CCC
>Mature Secondary Structure 
TVARHIAPPVAALSHDDALAYPGTLLAPDGTLVAPYDLEHGERAEGHAAAAPALGMLHA
CCCHHHCCCHHHCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHH
AHRPFRLDYSEARHVHVINGMGVTLGDSVIGLTALAALRAAHADVRFTLYRPARAPRYVD
CCCCEEECHHHCCEEEEEECCCEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH
ALYALATDVVAPSRALPCPADALPADAHCIDVGNHLYWPAFARLPMIDFFLDALGVDPAA
HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEECHHHHHHHHHHHHHHHHCCCHHH
VPAAAKRNRWLARLPLPALPAEWQRPYVLFCPNASTAVRSVPPALCVAFVERLAQRYGLP
CCCHHHHCCEEEECCCCCCCCCCCCCEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHCCC
VVGFGPLAHPAYVDVSRDATDTARFIAWIKGASVLFAPDTAALHLADGFDVPTLACFTTI
EEECCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCHHHHHHHHC
GPALRVRDYPHCVPVALDVPAELHGLHRSERPDDLAAVEAAYRAIDWDALAWPAARDVAA
CCHHEECCCCCEEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHCCCCHHCCCC
PAI
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA