| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688161
Identifier: 116688161
GI number: 116688161
Start: 149835
End: 150926
Strand: Reverse
Name: 116688161
Synonym: Bcen2424_0137
Alternate gene names: NA
Gene position: 150926-149835 (Counterclockwise)
Preceding gene: 116688162
Following gene: 116688157
Centisome position: 4.33
GC content: 72.53
Gene sequence:
>1092_bases ATGACGGTGGCCAGGCATATCGCGCCGCCCGTCGCCGCGCTGTCGCACGACGACGCGCTGGCGTACCCCGGCACGCTGCT CGCGCCCGACGGCACGCTCGTCGCGCCGTACGACCTCGAGCATGGCGAACGGGCCGAAGGCCATGCGGCGGCCGCGCCCG CGCTCGGCATGCTGCATGCCGCGCACCGGCCGTTCCGGCTCGATTACAGTGAGGCGCGGCACGTACACGTGATCAACGGG ATGGGGGTCACGCTCGGCGATTCGGTGATCGGACTGACGGCCCTCGCCGCGCTGCGAGCGGCCCATGCGGACGTACGCTT CACGCTGTACCGGCCGGCGCGCGCGCCGCGCTATGTCGACGCGCTGTATGCGCTCGCGACCGACGTGGTCGCGCCGTCGC GCGCGCTGCCGTGCCCCGCCGACGCGCTACCCGCCGATGCGCACTGCATCGACGTCGGCAATCACCTGTACTGGCCGGCG TTCGCGCGGCTGCCGATGATCGATTTCTTCCTCGACGCGCTCGGCGTCGATCCGGCCGCCGTGCCGGCCGCCGCGAAGCG CAATCGCTGGCTCGCGCGGCTGCCGCTGCCCGCACTGCCGGCTGAATGGCAGCGGCCGTACGTGCTGTTCTGCCCGAATG CGAGCACCGCGGTGCGCAGCGTGCCGCCCGCGTTGTGCGTCGCGTTCGTGGAACGGCTCGCGCAGCGTTACGGGCTGCCG GTCGTCGGCTTCGGTCCGCTCGCGCATCCGGCTTACGTGGACGTGAGCCGCGACGCGACCGACACCGCACGCTTCATCGC GTGGATCAAGGGCGCGAGCGTGCTGTTCGCACCGGACACGGCGGCCCTGCATCTCGCCGACGGTTTCGACGTGCCGACGC TCGCGTGCTTCACGACGATCGGGCCGGCGCTGCGCGTGCGCGACTATCCGCATTGCGTGCCGGTCGCGCTCGACGTGCCG GCCGAATTGCACGGGCTGCATCGCAGCGAGCGACCGGATGATCTGGCGGCGGTCGAAGCCGCTTACCGCGCCATCGACTG GGACGCGCTGGCGTGGCCCGCGGCGCGCGACGTGGCAGCGCCGGCCATCTGA
Upstream 100 bases:
>100_bases GATTGCCCGCGGTGATCGAGATCCGCATCCCGCAGGACGCCAGCACGCCGGCCGCGACGCTCGAACAGATCCGCGAGCAG GGCCGCCGCGCGCGCGGCGC
Downstream 100 bases:
>100_bases GCGAAGCGGGCGCAGCGGCGAGCGGAACGATCAAGCCGGCAGCGACACGCGCACAGCGCCAGCCCCGGCGCGATCGTCGC GTCGGCTTACCTCGGCAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MTVARHIAPPVAALSHDDALAYPGTLLAPDGTLVAPYDLEHGERAEGHAAAAPALGMLHAAHRPFRLDYSEARHVHVING MGVTLGDSVIGLTALAALRAAHADVRFTLYRPARAPRYVDALYALATDVVAPSRALPCPADALPADAHCIDVGNHLYWPA FARLPMIDFFLDALGVDPAAVPAAAKRNRWLARLPLPALPAEWQRPYVLFCPNASTAVRSVPPALCVAFVERLAQRYGLP VVGFGPLAHPAYVDVSRDATDTARFIAWIKGASVLFAPDTAALHLADGFDVPTLACFTTIGPALRVRDYPHCVPVALDVP AELHGLHRSERPDDLAAVEAAYRAIDWDALAWPAARDVAAPAI
Sequences:
>Translated_363_residues MTVARHIAPPVAALSHDDALAYPGTLLAPDGTLVAPYDLEHGERAEGHAAAAPALGMLHAAHRPFRLDYSEARHVHVING MGVTLGDSVIGLTALAALRAAHADVRFTLYRPARAPRYVDALYALATDVVAPSRALPCPADALPADAHCIDVGNHLYWPA FARLPMIDFFLDALGVDPAAVPAAAKRNRWLARLPLPALPAEWQRPYVLFCPNASTAVRSVPPALCVAFVERLAQRYGLP VVGFGPLAHPAYVDVSRDATDTARFIAWIKGASVLFAPDTAALHLADGFDVPTLACFTTIGPALRVRDYPHCVPVALDVP AELHGLHRSERPDDLAAVEAAYRAIDWDALAWPAARDVAAPAI >Mature_362_residues TVARHIAPPVAALSHDDALAYPGTLLAPDGTLVAPYDLEHGERAEGHAAAAPALGMLHAAHRPFRLDYSEARHVHVINGM GVTLGDSVIGLTALAALRAAHADVRFTLYRPARAPRYVDALYALATDVVAPSRALPCPADALPADAHCIDVGNHLYWPAF ARLPMIDFFLDALGVDPAAVPAAAKRNRWLARLPLPALPAEWQRPYVLFCPNASTAVRSVPPALCVAFVERLAQRYGLPV VGFGPLAHPAYVDVSRDATDTARFIAWIKGASVLFAPDTAALHLADGFDVPTLACFTTIGPALRVRDYPHCVPVALDVPA ELHGLHRSERPDDLAAVEAAYRAIDWDALAWPAARDVAAPAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38737; Mature: 38605
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVARHIAPPVAALSHDDALAYPGTLLAPDGTLVAPYDLEHGERAEGHAAAAPALGMLHA CCCCHHHCCCHHHCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHH AHRPFRLDYSEARHVHVINGMGVTLGDSVIGLTALAALRAAHADVRFTLYRPARAPRYVD CCCCEEECHHHCCEEEEEECCCEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH ALYALATDVVAPSRALPCPADALPADAHCIDVGNHLYWPAFARLPMIDFFLDALGVDPAA HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEECHHHHHHHHHHHHHHHHCCCHHH VPAAAKRNRWLARLPLPALPAEWQRPYVLFCPNASTAVRSVPPALCVAFVERLAQRYGLP CCCHHHHCCEEEECCCCCCCCCCCCCEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHCCC VVGFGPLAHPAYVDVSRDATDTARFIAWIKGASVLFAPDTAALHLADGFDVPTLACFTTI EEECCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCHHHHHHHHC GPALRVRDYPHCVPVALDVPAELHGLHRSERPDDLAAVEAAYRAIDWDALAWPAARDVAA CCHHEECCCCCEEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHCCCCHHCCCC PAI CCC >Mature Secondary Structure TVARHIAPPVAALSHDDALAYPGTLLAPDGTLVAPYDLEHGERAEGHAAAAPALGMLHA CCCHHHCCCHHHCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHH AHRPFRLDYSEARHVHVINGMGVTLGDSVIGLTALAALRAAHADVRFTLYRPARAPRYVD CCCCEEECHHHCCEEEEEECCCEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH ALYALATDVVAPSRALPCPADALPADAHCIDVGNHLYWPAFARLPMIDFFLDALGVDPAA HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEECHHHHHHHHHHHHHHHHCCCHHH VPAAAKRNRWLARLPLPALPAEWQRPYVLFCPNASTAVRSVPPALCVAFVERLAQRYGLP CCCHHHHCCEEEECCCCCCCCCCCCCEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHCCC VVGFGPLAHPAYVDVSRDATDTARFIAWIKGASVLFAPDTAALHLADGFDVPTLACFTTI EEECCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCHHHHHHHHC GPALRVRDYPHCVPVALDVPAELHGLHRSERPDDLAAVEAAYRAIDWDALAWPAARDVAA CCHHEECCCCCEEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHCCCCHHCCCC PAI CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA