| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is eutC [H]
Identifier: 116688154
GI number: 116688154
Start: 141652
End: 142449
Strand: Direct
Name: eutC [H]
Synonym: Bcen2424_0130
Alternate gene names: 116688154
Gene position: 141652-142449 (Clockwise)
Preceding gene: 116688153
Following gene: 116688156
Centisome position: 4.07
GC content: 73.31
Gene sequence:
>798_bases ATGAGCGACGCCGTCGAAAAGAACCCTTGGGCGCAGCTGAAGTCGTTCACGAACGCGCGGATCGCGCTCGGCCGCGCGGG CAACAGCCTGCCGACCGCGCCGCTCCTGGCCTTCAACCTGTCGCATGCGCAGGCGCGCGACGCGGTGCACCAGCCGCTCG ACGCGGATGCGCTGCGGCGCGAGATCGAGGCGGCCGGCCTGCTGCCGACGCTGCGGGTGCAGAGCGCCGCGCCCGACCGC GACCACTACCTGCGCCGGCCCGATCTCGGCCGCAAGCTGTCGGACGACAGCCGCGGCCTGCTGGCCGGCTACGGGGCGGC GCTCGACGACGCGCCCGATGTCGTGTTCGTGGTCGGCGACGGGCTGTCGGCGTTCGCGGCCGCGAAGCAGGCGCTGCCGC TGTTGCAGGCCGTGCGGCCGCGGCTCGACGCGGACGGCTGGCGGATCGGCCCGGTGGTGGTCGCGACGCAGGCGCGCGTC GCGCTCGGCGACGAGATCGGCGAGTTGCTGCGCGCGAAGGTGGTCGCGATGCTGATCGGCGAACGGCCCGGCCTCAGTTC GCCGGACAGCCTCGGCGTGTACCTGACGTGGGCGCCGAAGGTCGGCTGTCACGACGCGCTGCGCAACTGCATCTCGAACG TGCGGCCCGAAGGGCTGCCGCACGCCGCCGCCGCGCACAAGCTGCATTACCTGATGACGCATGCGCGCAGGCTCCAGTTG ACGGGCGTCGGGCTGAAGGACGACAGCGACGCGCTGCTGCCGGCGGCGGAAGCGGAGCGGATCGGCGCGACTACCTGA
Upstream 100 bases:
>100_bases TGGAGACGATGGAAATCGCCGATGCGCACGGCGCGCTGCGCGCGGCGACGGCACGCGTGCCGCTGCTCGCGGGCGCGAAC GACTGGATGGGGATTTCCGC
Downstream 100 bases:
>100_bases ACAGCCGCTCGCACAGGAAATCGACGAACACGCGCAGCTTCGGCGACAACTGCCGGCTCGACGGCCACACGATCGAGAAC TGCCCCGGCGCGATCCGGTA
Product: ethanolamine ammonia-lyase small subunit
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase small subunit [H]
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MSDAVEKNPWAQLKSFTNARIALGRAGNSLPTAPLLAFNLSHAQARDAVHQPLDADALRREIEAAGLLPTLRVQSAAPDR DHYLRRPDLGRKLSDDSRGLLAGYGAALDDAPDVVFVVGDGLSAFAAAKQALPLLQAVRPRLDADGWRIGPVVVATQARV ALGDEIGELLRAKVVAMLIGERPGLSSPDSLGVYLTWAPKVGCHDALRNCISNVRPEGLPHAAAAHKLHYLMTHARRLQL TGVGLKDDSDALLPAAEAERIGATT
Sequences:
>Translated_265_residues MSDAVEKNPWAQLKSFTNARIALGRAGNSLPTAPLLAFNLSHAQARDAVHQPLDADALRREIEAAGLLPTLRVQSAAPDR DHYLRRPDLGRKLSDDSRGLLAGYGAALDDAPDVVFVVGDGLSAFAAAKQALPLLQAVRPRLDADGWRIGPVVVATQARV ALGDEIGELLRAKVVAMLIGERPGLSSPDSLGVYLTWAPKVGCHDALRNCISNVRPEGLPHAAAAHKLHYLMTHARRLQL TGVGLKDDSDALLPAAEAERIGATT >Mature_264_residues SDAVEKNPWAQLKSFTNARIALGRAGNSLPTAPLLAFNLSHAQARDAVHQPLDADALRREIEAAGLLPTLRVQSAAPDRD HYLRRPDLGRKLSDDSRGLLAGYGAALDDAPDVVFVVGDGLSAFAAAKQALPLLQAVRPRLDADGWRIGPVVVATQARVA LGDEIGELLRAKVVAMLIGERPGLSSPDSLGVYLTWAPKVGCHDALRNCISNVRPEGLPHAAAAHKLHYLMTHARRLQLT GVGLKDDSDALLPAAEAERIGATT
Specific function: Ethanolamine utilization. [C]
COG id: COG4302
COG function: function code E; Ethanolamine ammonia-lyase, small subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eutC family [H]
Homologues:
Organism=Escherichia coli, GI1788781, Length=235, Percent_Identity=33.6170212765957, Blast_Score=115, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009246 [H]
Pfam domain/function: PF05985 EutC [H]
EC number: =4.3.1.7 [H]
Molecular weight: Translated: 28160; Mature: 28029
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAVEKNPWAQLKSFTNARIALGRAGNSLPTAPLLAFNLSHAQARDAVHQPLDADALRR CCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHCCCCHHHHHH EIEAAGLLPTLRVQSAAPDRDHYLRRPDLGRKLSDDSRGLLAGYGAALDDAPDVVFVVGD HHHHHCCCCCEECCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEECC GLSAFAAAKQALPLLQAVRPRLDADGWRIGPVVVATQARVALGDEIGELLRAKVVAMLIG CHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHC ERPGLSSPDSLGVYLTWAPKVGCHDALRNCISNVRPEGLPHAAAAHKLHYLMTHARRLQL CCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEE TGVGLKDDSDALLPAAEAERIGATT EECCCCCCCCCCCCCHHHHHCCCCC >Mature Secondary Structure SDAVEKNPWAQLKSFTNARIALGRAGNSLPTAPLLAFNLSHAQARDAVHQPLDADALRR CCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHCCCCHHHHHH EIEAAGLLPTLRVQSAAPDRDHYLRRPDLGRKLSDDSRGLLAGYGAALDDAPDVVFVVGD HHHHHCCCCCEECCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEECC GLSAFAAAKQALPLLQAVRPRLDADGWRIGPVVVATQARVALGDEIGELLRAKVVAMLIG CHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHC ERPGLSSPDSLGVYLTWAPKVGCHDALRNCISNVRPEGLPHAAAAHKLHYLMTHARRLQL CCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEE TGVGLKDDSDALLPAAEAERIGATT EECCCCCCCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA