| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688146
Identifier: 116688146
GI number: 116688146
Start: 131646
End: 132218
Strand: Reverse
Name: 116688146
Synonym: Bcen2424_0122
Alternate gene names: NA
Gene position: 132218-131646 (Counterclockwise)
Preceding gene: 116688147
Following gene: 116688141
Centisome position: 3.8
GC content: 69.46
Gene sequence:
>573_bases ATGTCTACGAGCCGTCCGTCCCCGCTCGCGCTGGCCGTCCTTGCGACGCTCACCGAAACACCGATGCATCCGTACGGGAT GCTGCAGCAACTGAAGGCCCGCGGCTACGACGAAGTCGTCAACGTGCGGCAGCGCACGAGCCTGTACCAGACGATCGACC GGCTGCTGCGCGACGGGCTGATCGCCGTGCACGACACCGAACGCGACGGCGCGTTTCCGGAGCGCACGGTGTATGCGCTG ACGGAAGCCGGGCACACGGCCGGGCAGGCGTGGCTGCATGCGCTGCTCGCGGAGCCCGCCCGTGAATTTCCGGCGTTCGG CGCCGGCCTCGCGTTCCTGCCGCTGCTCGATGCGGAAGATGCGCGTCACCAGCTCGAGCTGCGCATCGCGCGGCTCGATG CCGAGCGCGAGCGGCTGGAAGCGCTGCGCGCCACCGCGCAAGCCGACCAGGTGCCGCGCCTGTTCCTGCTGCAGAACGAG CATGCGCTCGTGCTGCTCAATGCGGAGCTGAACTGGGCGCGCAGCGTCGTCGAACACCTGAAGATCGGCGCGCTGCGCTG GGTGGACGGCTGA
Upstream 100 bases:
>100_bases CGCCGGCCGCGAAGCGCTCGCACCTCGGCTGAAACCCTTGTCAAATCAGATAGTCTAATTGAGAATAGTTATATTATTAC TAGATATATTTTAACTACTC
Downstream 100 bases:
>100_bases CGCGCCGCGCCGGCCGTTTTCCGCCGCCAACGGGCGTCGGCGCGGTCAAAGCACCTTGCCGGGATTCAGGATGCCGCGCG GGTCCAGCGCGGCCTTCAGC
Product: PadR-like family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator PadR-Like Family; PadR-Like Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; MtrY Protein; Padr Family Transcriptional Regulator; Ankyrin-Like Protein; PadR Transcriptional Regulator
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSTSRPSPLALAVLATLTETPMHPYGMLQQLKARGYDEVVNVRQRTSLYQTIDRLLRDGLIAVHDTERDGAFPERTVYAL TEAGHTAGQAWLHALLAEPAREFPAFGAGLAFLPLLDAEDARHQLELRIARLDAERERLEALRATAQADQVPRLFLLQNE HALVLLNAELNWARSVVEHLKIGALRWVDG
Sequences:
>Translated_190_residues MSTSRPSPLALAVLATLTETPMHPYGMLQQLKARGYDEVVNVRQRTSLYQTIDRLLRDGLIAVHDTERDGAFPERTVYAL TEAGHTAGQAWLHALLAEPAREFPAFGAGLAFLPLLDAEDARHQLELRIARLDAERERLEALRATAQADQVPRLFLLQNE HALVLLNAELNWARSVVEHLKIGALRWVDG >Mature_189_residues STSRPSPLALAVLATLTETPMHPYGMLQQLKARGYDEVVNVRQRTSLYQTIDRLLRDGLIAVHDTERDGAFPERTVYALT EAGHTAGQAWLHALLAEPAREFPAFGAGLAFLPLLDAEDARHQLELRIARLDAERERLEALRATAQADQVPRLFLLQNEH ALVLLNAELNWARSVVEHLKIGALRWVDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21231; Mature: 21099
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSRPSPLALAVLATLTETPMHPYGMLQQLKARGYDEVVNVRQRTSLYQTIDRLLRDGL CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCE IAVHDTERDGAFPERTVYALTEAGHTAGQAWLHALLAEPAREFPAFGAGLAFLPLLDAED EEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHH ARHQLELRIARLDAERERLEALRATAQADQVPRLFLLQNEHALVLLNAELNWARSVVEHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCHHHHHHHHHH KIGALRWVDG HHCCEEECCC >Mature Secondary Structure STSRPSPLALAVLATLTETPMHPYGMLQQLKARGYDEVVNVRQRTSLYQTIDRLLRDGL CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCE IAVHDTERDGAFPERTVYALTEAGHTAGQAWLHALLAEPAREFPAFGAGLAFLPLLDAED EEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHH ARHQLELRIARLDAERERLEALRATAQADQVPRLFLLQNEHALVLLNAELNWARSVVEHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCHHHHHHHHHH KIGALRWVDG HHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA