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The map label for this gene is glcD [H]

Identifier: 116688145

GI number: 116688145

Start: 130170

End: 131600

Strand: Direct

Name: glcD [H]

Synonym: Bcen2424_0121

Alternate gene names: 116688145

Gene position: 130170-131600 (Clockwise)

Preceding gene: 116688144

Following gene: 116688148

Centisome position: 3.74

GC content: 70.72

Gene sequence:

>1431_bases
ATGCCGACCTCGAACCGGACCGCTGCGGGCAGCGCACCGGACGGCAGGCCGCTGCCGGACGAGGCCGTCGATGCCGTGCT
CGCCGCCGAACTGGGCGACGCGCTCGTCACGCGCGCGGCCGATATCGATCCGCGTTACTTCACCGCGTACAACGAGCCGG
CCGGCGTGCGACCGCGTGCGCTGGTACGCCCGTGCAGCGTCGACGACGTGTCGCGCACGCTCGCGCTGTGCTCGCGGCTC
GGCCAGCCGGTCGTGCCGCAAGGCGGGCTGACCGGGCTCGCGCGCGGGGCGGTCGCGCTGGGCGGCGAGGTCGTGCTGTC
GATGGAGCGCTTCGCGGGCATCGAAGCGCTCGACGCGGCGGCCGGTACGATCACCGTGCGCGCGGGCACGCCGCTGCAGA
CGGTGCAGGAAGCCGCCGAAGCGGCGGGCTTCACGTTCGGCGTCGATCTCGGCGCGCGCGGCTCGTGCCAGATCGGCGGC
ATGCTCGCGACCAATGCGGGCGGCACGCGCGCGATCCGCTACGGGATGATGCGCGAGCAGGTGCTCGGGCTGGAGGCGGT
GCTCGCGGACGGCACGATCGTGTCGTCGATGAACCGGATGCTGAAGAACAACGCGGGCTACGACCTGAAGCAGTTGTTCA
TCGGCAGCGAAGGGACGCTCGGCGTCGTCACGCGCGCGGTGCTGCGGCTGCATCCGTTGCTCGCGGCGCCGGCCACGGCG
CTCTGCCGCGTGCGCGACTACGACGCGGTGGTCGCGCTGTGGAACCGCGTGCGCACGCTGCCGGAGGTCGTCAGTTTCGA
GGCGATGTGGCCGGCGTTCTACGACTACGTCGCGCGGCATACGCCCGGGGTATCGGCGCCGTTCATCGGCGACGGCGGTT
TCGTGGTGTTGATCGAATGCGCGACGAGCGCGCCGGGCGGCGATGCGCACCAGGCGCTCGAAACGGGGCTGGCCGCGGGA
TTCGATGCCGGGCTCGTCGACGATGCGGTACTCGCGACTTCCGAGCGGCAGGCCCGCGATTTGTGGACGCTGCGCGAAGG
TCTCGCGATCGATGCACTGCCCCAGCTCGTCAACTTCGACGTGAGTCTGCCGACGGGCGAACTCGGTACGTTCGCCGAAC
GCTGCGAGGCGGCATTGCGGGCGCGCTGGCCGGCGCTCACGTGCCTGTTTTTCGGCCATGTCGGCGACGGCAACGTGCAT
ATCGGCGTGTCACTGGCCGAGATGACCGACGCGGACGCCGATGCGCTCGATCACTGCGTGTATGCGGTGGTGCGCGACAT
GGGTGGCTCGGTGTCGGCCGAGCACGGGATCGGCGTGCTCAAGCGTCCTTATCTGGCGCACACGCGCAGCGACGCGGAAA
TCGGACTGATGCGGCGGCTGAAGGCCGCGCTGGACCCGCGCGGCATCCTGAATCCCGGCAAGGTGCTTTGA

Upstream 100 bases:

>100_bases
GGCGATCGACAAGCTGAAGGCGGACGGCACGGTGAAGTCGCTCGGGTTGAAGTATTTCGGCGATATCGACATCTCGACGA
AGTAAGCGGGGCCGCGCACG

Downstream 100 bases:

>100_bases
CCGCGCCGACGCCCGTTGGCGGCGGAAAACGGCCGGCGCGGCGCGTCAGCCGTCCACCCAGCGCAGCGCGCCGATCTTCA
GGTGTTCGACGACGCTGCGC

Product: FAD linked oxidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MPTSNRTAAGSAPDGRPLPDEAVDAVLAAELGDALVTRAADIDPRYFTAYNEPAGVRPRALVRPCSVDDVSRTLALCSRL
GQPVVPQGGLTGLARGAVALGGEVVLSMERFAGIEALDAAAGTITVRAGTPLQTVQEAAEAAGFTFGVDLGARGSCQIGG
MLATNAGGTRAIRYGMMREQVLGLEAVLADGTIVSSMNRMLKNNAGYDLKQLFIGSEGTLGVVTRAVLRLHPLLAAPATA
LCRVRDYDAVVALWNRVRTLPEVVSFEAMWPAFYDYVARHTPGVSAPFIGDGGFVVLIECATSAPGGDAHQALETGLAAG
FDAGLVDDAVLATSERQARDLWTLREGLAIDALPQLVNFDVSLPTGELGTFAERCEAALRARWPALTCLFFGHVGDGNVH
IGVSLAEMTDADADALDHCVYAVVRDMGGSVSAEHGIGVLKRPYLAHTRSDAEIGLMRRLKAALDPRGILNPGKVL

Sequences:

>Translated_476_residues
MPTSNRTAAGSAPDGRPLPDEAVDAVLAAELGDALVTRAADIDPRYFTAYNEPAGVRPRALVRPCSVDDVSRTLALCSRL
GQPVVPQGGLTGLARGAVALGGEVVLSMERFAGIEALDAAAGTITVRAGTPLQTVQEAAEAAGFTFGVDLGARGSCQIGG
MLATNAGGTRAIRYGMMREQVLGLEAVLADGTIVSSMNRMLKNNAGYDLKQLFIGSEGTLGVVTRAVLRLHPLLAAPATA
LCRVRDYDAVVALWNRVRTLPEVVSFEAMWPAFYDYVARHTPGVSAPFIGDGGFVVLIECATSAPGGDAHQALETGLAAG
FDAGLVDDAVLATSERQARDLWTLREGLAIDALPQLVNFDVSLPTGELGTFAERCEAALRARWPALTCLFFGHVGDGNVH
IGVSLAEMTDADADALDHCVYAVVRDMGGSVSAEHGIGVLKRPYLAHTRSDAEIGLMRRLKAALDPRGILNPGKVL
>Mature_475_residues
PTSNRTAAGSAPDGRPLPDEAVDAVLAAELGDALVTRAADIDPRYFTAYNEPAGVRPRALVRPCSVDDVSRTLALCSRLG
QPVVPQGGLTGLARGAVALGGEVVLSMERFAGIEALDAAAGTITVRAGTPLQTVQEAAEAAGFTFGVDLGARGSCQIGGM
LATNAGGTRAIRYGMMREQVLGLEAVLADGTIVSSMNRMLKNNAGYDLKQLFIGSEGTLGVVTRAVLRLHPLLAAPATAL
CRVRDYDAVVALWNRVRTLPEVVSFEAMWPAFYDYVARHTPGVSAPFIGDGGFVVLIECATSAPGGDAHQALETGLAAGF
DAGLVDDAVLATSERQARDLWTLREGLAIDALPQLVNFDVSLPTGELGTFAERCEAALRARWPALTCLFFGHVGDGNVHI
GVSLAEMTDADADALDHCVYAVVRDMGGSVSAEHGIGVLKRPYLAHTRSDAEIGLMRRLKAALDPRGILNPGKVL

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=423, Percent_Identity=38.2978723404255, Blast_Score=254, Evalue=2e-67,
Organism=Homo sapiens, GI37595756, Length=441, Percent_Identity=34.2403628117914, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI37595754, Length=464, Percent_Identity=32.5431034482759, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI4501993, Length=524, Percent_Identity=22.5190839694656, Blast_Score=89, Evalue=8e-18,
Organism=Escherichia coli, GI1789351, Length=428, Percent_Identity=29.4392523364486, Blast_Score=128, Evalue=1e-30,
Organism=Escherichia coli, GI48994907, Length=211, Percent_Identity=29.3838862559242, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI48994914, Length=151, Percent_Identity=33.7748344370861, Blast_Score=67, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17534361, Length=429, Percent_Identity=34.032634032634, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI71992373, Length=440, Percent_Identity=31.8181818181818, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI71992381, Length=440, Percent_Identity=30.9090909090909, Blast_Score=171, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI71992392, Length=398, Percent_Identity=31.4070351758794, Blast_Score=154, Evalue=7e-38,
Organism=Saccharomyces cerevisiae, GI6320023, Length=461, Percent_Identity=36.4425162689805, Blast_Score=275, Evalue=9e-75,
Organism=Saccharomyces cerevisiae, GI6320764, Length=448, Percent_Identity=33.9285714285714, Blast_Score=248, Evalue=2e-66,
Organism=Saccharomyces cerevisiae, GI6320027, Length=445, Percent_Identity=28.9887640449438, Blast_Score=173, Evalue=7e-44,
Organism=Drosophila melanogaster, GI18921117, Length=501, Percent_Identity=33.1337325349301, Blast_Score=242, Evalue=4e-64,
Organism=Drosophila melanogaster, GI24639277, Length=501, Percent_Identity=33.1337325349301, Blast_Score=242, Evalue=4e-64,
Organism=Drosophila melanogaster, GI24639275, Length=501, Percent_Identity=33.1337325349301, Blast_Score=242, Evalue=4e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 49838; Mature: 49707

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTSNRTAAGSAPDGRPLPDEAVDAVLAAELGDALVTRAADIDPRYFTAYNEPAGVRPRA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHH
LVRPCSVDDVSRTLALCSRLGQPVVPQGGLTGLARGAVALGGEVVLSMERFAGIEALDAA
HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHEEEHHHHCCCHHHHCC
AGTITVRAGTPLQTVQEAAEAAGFTFGVDLGARGSCQIGGMLATNAGGTRAIRYGMMREQ
CCEEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCCEECCEEEECCCCHHHHHHHHHHHH
VLGLEAVLADGTIVSSMNRMLKNNAGYDLKQLFIGSEGTLGVVTRAVLRLHPLLAAPATA
HHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHCCHHH
LCRVRDYDAVVALWNRVRTLPEVVSFEAMWPAFYDYVARHTPGVSAPFIGDGGFVVLIEC
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEEEE
ATSAPGGDAHQALETGLAAGFDAGLVDDAVLATSERQARDLWTLREGLAIDALPQLVNFD
CCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCC
VSLPTGELGTFAERCEAALRARWPALTCLFFGHVGDGNVHIGVSLAEMTDADADALDHCV
CCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEHHHCCCCHHHHHHHH
YAVVRDMGGSVSAEHGIGVLKRPYLAHTRSDAEIGLMRRLKAALDPRGILNPGKVL
HHHHHHCCCCCCCCCCCCHHCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PTSNRTAAGSAPDGRPLPDEAVDAVLAAELGDALVTRAADIDPRYFTAYNEPAGVRPRA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHH
LVRPCSVDDVSRTLALCSRLGQPVVPQGGLTGLARGAVALGGEVVLSMERFAGIEALDAA
HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHEEEHHHHCCCHHHHCC
AGTITVRAGTPLQTVQEAAEAAGFTFGVDLGARGSCQIGGMLATNAGGTRAIRYGMMREQ
CCEEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCCEECCEEEECCCCHHHHHHHHHHHH
VLGLEAVLADGTIVSSMNRMLKNNAGYDLKQLFIGSEGTLGVVTRAVLRLHPLLAAPATA
HHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHCCHHH
LCRVRDYDAVVALWNRVRTLPEVVSFEAMWPAFYDYVARHTPGVSAPFIGDGGFVVLIEC
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEEEE
ATSAPGGDAHQALETGLAAGFDAGLVDDAVLATSERQARDLWTLREGLAIDALPQLVNFD
CCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCC
VSLPTGELGTFAERCEAALRARWPALTCLFFGHVGDGNVHIGVSLAEMTDADADALDHCV
CCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEHHHCCCCHHHHHHHH
YAVVRDMGGSVSAEHGIGVLKRPYLAHTRSDAEIGLMRRLKAALDPRGILNPGKVL
HHHHHHCCCCCCCCCCCCHHCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]