| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is mnmG [H]
Identifier: 116688117
GI number: 116688117
Start: 96438
End: 98408
Strand: Direct
Name: mnmG [H]
Synonym: Bcen2424_0093
Alternate gene names: 116688117
Gene position: 96438-98408 (Clockwise)
Preceding gene: 116688116
Following gene: 116688118
Centisome position: 2.77
GC content: 65.25
Gene sequence:
>1971_bases ATGCTTTTTCCCACAGAATTTGACGTCATCGTCGTCGGTGGCGGCCATGCCGGCACGGAAGCCGCGCTGGCGTCGGCCCG TATGGGCGCGAAGACACTGCTGCTGACCCACAACATTGAAACGCTGGGGCAGATGAGCTGCAATCCGTCGATCGGCGGCA TTGGCAAGGGCCATCTGGTCAAGGAAGTCGATGCGCTCGGCGGCGCAATGGCCGCCGCGACGGATGAAAGCGGTATTCAG TTCCGGATCCTCAATTCCTCGAAGGGCCCGGCCGTGCGCGCGACCCGCGCACAGGCCGATCGCATCCTGTACAAGGCCGC AATCCGCCATCGGCTCGAAAATCAGCCGAACCTGTGGCTGTTCCAGCAGGCCGTCGACGACCTGATGGTCGAAGGCGACC GCGTGGTGGGCGCCGTCACGCAGATCGGCATCCGCTTCCGCGCTCGCGCCGTCGTGCTGACGGCCGGTACGTTCCTCGAC GGCAAGATCCACGTCGGCCTGAACAACTACACGGGCGGTCGCGCGGGCGATCCGGCGGCCGTGTCGCTGTCGTCGCGCCT GAAGGAGCTGAAGCTGCCGCAGGGCCGGCTGAAGACCGGTACGCCGCCGCGTATCGACGGCCGCACGATCGACTTCTCGA AGCTCGACGAGCAGCCGGGCGACCTCGATCCGATCCCGGTGTTCTCGTTCCTGGGCCGCGCGGACCAGCATCCGCAGCAG CTGCCGTGCTGGGTCACACACACGAACGAGCGCACGCACGACATCATTCGCGGCGGTCTCGACCGTTCGCCTATGTATAC AGGCGTGATCGAAGGCGTCGGGCCGCGCTATTGCCCGTCGATCGAGGACAAGATCCACCGGTTCGCCTCGAAGGAATCGC ACCAGATCTTCCTCGAACCGGAAGGCCTGACGACCCACGAGTTCTACCCGAACGGGATTTCGACGAGCCTGCCGTTCGAT GTCCAACTCGAACTCGTGCATTCGATGCGCGGCCTCGAGAACGCGCACATCCTGCGCCCCGGCTACGCGATCGAGTACGA CTACTTCGACCCGCGTGCGCTGAAGGCGTCGCTCGAGACGAAGGCAATCAACGGGCTGTTCTTTGCGGGCCAGATCAACG GCACGACCGGCTACGAAGAAGCGGCCGCGCAGGGGCTGTTGGCTGGCCTCAATGCGGGCCGCTACGTGCAGGAGAAGGAT GCGTGGTGCCCGCGTCGCGACCAGGCCTATCTGGGCGTGCTGGTCGACGATCTCGTCACGCGCGGCGTGGCCGAGCCGTA CCGGATGTTCACGAGCCGCGCCGAGTATCGCCTGAGCCTGCGCGAAGACAATGCCGACATGCGTCTGACCGAAATCGGCC GCGAGCTGGGGCTTGTCGACGACGCGCGTTGGGACGCATTCAGCCGGAAGCGCGACGCTGTTTCACGTGAAACCGAACGC CTGAAGTCGACCTGGGTCACGCCGAAGACGCTGCCGGTGGAAGAAGCGACGGCGTTGCTCGGCAAGGCAATCGATCACGA ATACAGCCTCGCTGAACTGCTGCGTCGGCCTGGCGTGAGCTACGACGGCGTGTGCGGACTGAAGGGCGGCGAGTGCGGCC CCGCAGAGCCGTTGGCGGACGATCCGGTGCTGCTCGAGCAGATCAAGGAGCAGGTCGAGATCGGTATCAAGTATCAGGGC TATATCGAGCGCCAGGCGTCCGAAATCGAGCGCAACGACGCGAACGAGAACACGCGCCTGCCGGACGGTATCGATTACCG CGAAGTGCGCGGCCTGTCATTCGAGGTGAGCCAGAAGCTCAACGAATTCCGGCCGGAAACGATCGGGCAGGCGTCGCGTA TCTCGGGCGTCACGCCGGCGGCAATCTCGCTGCTGATGGTGCACCTGAAGCGTCGTGGCCTGGGCCGCCGTAACGGTACG GCCGCAGAGGCCGCGGAGCAGGGGGACGGCGCCGTCCCGACGCAACAATGA
Upstream 100 bases:
>100_bases TACCATTCGGATGGCCTTCGGGTGAAAAGCGAACCCGCTATAATTCGGCCCATACATTTCTCTGATAGGTTCGTGCGCAG CTCCGCGTACGGAATCCACC
Downstream 100 bases:
>100_bases CGGCGCGTCGCGCGCCGGCGGTTAATCGGGACGTACTGGAAGGGATGCTCGTCGAAGGTACGGCGGCGCTCGACCTCACG CTGACGGATACACAACGCAA
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 656; Mature: 656
Protein sequence:
>656_residues MLFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAAATDESGIQ FRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLD GKIHVGLNNYTGGRAGDPAAVSLSSRLKELKLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRADQHPQQ LPCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTHEFYPNGISTSLPFD VQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETKAINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKD AWCPRRDQAYLGVLVDDLVTRGVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETER LKSTWVTPKTLPVEEATALLGKAIDHEYSLAELLRRPGVSYDGVCGLKGGECGPAEPLADDPVLLEQIKEQVEIGIKYQG YIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNEFRPETIGQASRISGVTPAAISLLMVHLKRRGLGRRNGT AAEAAEQGDGAVPTQQ
Sequences:
>Translated_656_residues MLFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAAATDESGIQ FRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLD GKIHVGLNNYTGGRAGDPAAVSLSSRLKELKLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRADQHPQQ LPCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTHEFYPNGISTSLPFD VQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETKAINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKD AWCPRRDQAYLGVLVDDLVTRGVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETER LKSTWVTPKTLPVEEATALLGKAIDHEYSLAELLRRPGVSYDGVCGLKGGECGPAEPLADDPVLLEQIKEQVEIGIKYQG YIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNEFRPETIGQASRISGVTPAAISLLMVHLKRRGLGRRNGT AAEAAEQGDGAVPTQQ >Mature_656_residues MLFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAAATDESGIQ FRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLD GKIHVGLNNYTGGRAGDPAAVSLSSRLKELKLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRADQHPQQ LPCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTHEFYPNGISTSLPFD VQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETKAINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKD AWCPRRDQAYLGVLVDDLVTRGVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETER LKSTWVTPKTLPVEEATALLGKAIDHEYSLAELLRRPGVSYDGVCGLKGGECGPAEPLADDPVLLEQIKEQVEIGIKYQG YIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNEFRPETIGQASRISGVTPAAISLLMVHLKRRGLGRRNGT AAEAAEQGDGAVPTQQ
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=653, Percent_Identity=44.4104134762634, Blast_Score=485, Evalue=1e-137, Organism=Homo sapiens, GI19882217, Length=678, Percent_Identity=42.7728613569322, Blast_Score=471, Evalue=1e-133, Organism=Homo sapiens, GI183227703, Length=693, Percent_Identity=41.8470418470419, Blast_Score=466, Evalue=1e-131, Organism=Escherichia coli, GI2367273, Length=639, Percent_Identity=69.6400625978091, Blast_Score=910, Evalue=0.0, Organism=Caenorhabditis elegans, GI17534255, Length=635, Percent_Identity=42.0472440944882, Blast_Score=477, Evalue=1e-135, Organism=Saccharomyces cerevisiae, GI6321202, Length=638, Percent_Identity=45.6112852664577, Blast_Score=508, Evalue=1e-145, Organism=Drosophila melanogaster, GI24658174, Length=649, Percent_Identity=45.9167950693374, Blast_Score=499, Evalue=1e-141,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 71928; Mature: 71928
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLV CCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEECHHHHHCCCCCCCCCCCCCCHHH KEVDALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWL HHHHHHCCHHEECCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEE FQQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAA HHHHHHHHHHCCCHHHHHHHHHHHHEEEEEEEEEECEEECCEEEEEECCCCCCCCCCCCE VSLSSRLKELKLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRADQHPQQ EEHHHHHHHHCCCCCCCCCCCCCCCCCCEECHHHHCCCCCCCCCCHHHHHHCCCCCCCCC LPCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEP CCEEEECCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECC EGLTTHEFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLET CCCEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCEEEEECCCCCHHHHHHHHH KAINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVT HHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHH RGVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETER HCCCHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH LKSTWVTPKTLPVEEATALLGKAIDHEYSLAELLRRPGVSYDGVCGLKGGECGPAEPLAD HHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCC DPVLLEQIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKL CHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHH NEFRPETIGQASRISGVTPAAISLLMVHLKRRGLGRRNGTAAEAAEQGDGAVPTQQ HHCCCHHCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCC >Mature Secondary Structure MLFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLV CCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEECHHHHHCCCCCCCCCCCCCCHHH KEVDALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWL HHHHHHCCHHEECCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEE FQQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAA HHHHHHHHHHCCCHHHHHHHHHHHHEEEEEEEEEECEEECCEEEEEECCCCCCCCCCCCE VSLSSRLKELKLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRADQHPQQ EEHHHHHHHHCCCCCCCCCCCCCCCCCCEECHHHHCCCCCCCCCCHHHHHHCCCCCCCCC LPCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEP CCEEEECCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECC EGLTTHEFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLET CCCEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCEEEEECCCCCHHHHHHHHH KAINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVT HHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHH RGVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETER HCCCHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH LKSTWVTPKTLPVEEATALLGKAIDHEYSLAELLRRPGVSYDGVCGLKGGECGPAEPLAD HHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCC DPVLLEQIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKL CHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHH NEFRPETIGQASRISGVTPAAISLLMVHLKRRGLGRRNGTAAEAAEQGDGAVPTQQ HHCCCHHCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA