Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is livH [C]

Identifier: 116688114

GI number: 116688114

Start: 92176

End: 93360

Strand: Direct

Name: livH [C]

Synonym: Bcen2424_0090

Alternate gene names: 116688114

Gene position: 92176-93360 (Clockwise)

Preceding gene: 116688113

Following gene: 116688115

Centisome position: 2.65

GC content: 67.09

Gene sequence:

>1185_bases
ATGGCCGCCGCCGTGCCGCCTGGAACCACCGGGGCCCGCCGCATGACGCGACGTGCCGATCGCGTCGCGCGCGCCCCGGC
CGTTTCCGCCTTTCGTTTCTCCGCAGCCTTCTCTCGATACACGAAACGTATGGATCTCTCGATTGCGGCGATCCTCGCGC
AAGACGGCATCACGACCGGCGCCATTTATGCATTGTTGTCGCTGGCGCTCGTGCTGGTGTTTTCCGTCACGCGGGTGATC
TTCATTCCCCAGGGCGAGTTCGTCGCCTACGGTGCGCTGACGCTCGCCGCGTTGCAGGCGCAGAAATTCCCCGCCACCTG
CTGGCTGCTGTTCGTGATGGGCATCGCGTGCTTCCTGCTCGAAGTCGGTGGCCTGATCCGGCATCGCGAACGCCGCCATC
AGCTCGGCCGCACGCTCGCGACGCTCGGCAGCCGCTACATCCTGCTGCCGCTCGCGGTGTTCGCTATCACGCGCAGCTTC
GCCGCGCAGCCGATGCCGATGCTCGCGCAGATCGCGCTGACGCTCGCGATCGTCGTGCCGATGGGGCCGTTCGTCTACCG
GCTCGTGTACCAGCCGATCGCCGAAGGCACGACGCTGCTGCTGCTGATCGTGTCGGTGGCCGTCCATTTCGCGATGGTCG
GCCTCGGCCTCGTGATGTTCGGTGCGGAAGGCTCGCGCACCAACGGGTTCTCGGACGCGTCGCTCGCGATCGGCAGCATG
ACGGTGTCGGTGCAGAGCGTCCTGGTCGTCGTCACGGCGCTCGTGCTGATCGGTGCGCTCTACGTGTACTTCGGCCGCAC
GATCGCCGGCAAGGCGCTGCGCGCGACCTCGGTGAACCGGCTCGGCGCGCGGCTCGTCGGCATCGGCACGACCGAAGCCG
GGCGGCTCGCGTTCACGTTCGCGGCGGGGCTCGGCGTGCTGTCGGGGATCCTCGTCGGCCCGCTGACGACGATCTACTAC
GACTCGGGCTTCCTGATCGGCCTGAAGGGCTTCGTCGGCGCGATCATCGGCGGGCTCGTCAGCTATCCGCTGGCGGCCGC
TGGCTCGCTGCTCGTCGGCGTGCTCGAATCGTATTCGTCATTCTGGGCGAGTGCCTACAAGGAGGTGATCGTGTTCACGC
TGATCATTCCGGTGCTGCTGTGGCGGAGCTTCGTGACGCCGCATGCGGAAGAGGAAGAGGAGTGA

Upstream 100 bases:

>100_bases
CGACGGCAAGTGGAAGCTGCAGGCCGAGTAAGCATCACGTGAAACCGGCATGCACGGCGCGAACGGCGCCGCGTGTGCCG
TCGGCAGGGTGGCGCGCCTC

Downstream 100 bases:

>100_bases
CGCGATGAAGACGATGGTACGCAACAAGACCTTCTGGCTGTTTCTCGTGGTGCTGTTCGCGCTGCCGGTGCTGCCCGGCG
CGCTCCAGGTACCGGAGTAC

Product: inner-membrane translocator

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: ABC Transporter Permease Protein; Branched-Chain Amino Acid ABC Transporter Permease Protein; Branched-Chain Amino Acid ABC Transporter Permease; Branched-Chain Amino Acid Transport System Permease Protein; ABC Transporter Permease; Inner-Membrane TranslocatorABC Transporter ; Branched Chain Amino Acid ABC Transporter Permease; ABC-Transporter Permease Component; Branched-Chain Amino Acid ABC Transporter Membrane Protein; Amino Acid Or Sugar ABC Transport System Permease Protein; ABC Transporter ATPase Component; Branched-Chain Amino Acid Transport System Permease; Amino Acid ABC Transporter Permease; ABC Transporter Membrane Spanning Protein

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MAAAVPPGTTGARRMTRRADRVARAPAVSAFRFSAAFSRYTKRMDLSIAAILAQDGITTGAIYALLSLALVLVFSVTRVI
FIPQGEFVAYGALTLAALQAQKFPATCWLLFVMGIACFLLEVGGLIRHRERRHQLGRTLATLGSRYILLPLAVFAITRSF
AAQPMPMLAQIALTLAIVVPMGPFVYRLVYQPIAEGTTLLLLIVSVAVHFAMVGLGLVMFGAEGSRTNGFSDASLAIGSM
TVSVQSVLVVVTALVLIGALYVYFGRTIAGKALRATSVNRLGARLVGIGTTEAGRLAFTFAAGLGVLSGILVGPLTTIYY
DSGFLIGLKGFVGAIIGGLVSYPLAAAGSLLVGVLESYSSFWASAYKEVIVFTLIIPVLLWRSFVTPHAEEEEE

Sequences:

>Translated_394_residues
MAAAVPPGTTGARRMTRRADRVARAPAVSAFRFSAAFSRYTKRMDLSIAAILAQDGITTGAIYALLSLALVLVFSVTRVI
FIPQGEFVAYGALTLAALQAQKFPATCWLLFVMGIACFLLEVGGLIRHRERRHQLGRTLATLGSRYILLPLAVFAITRSF
AAQPMPMLAQIALTLAIVVPMGPFVYRLVYQPIAEGTTLLLLIVSVAVHFAMVGLGLVMFGAEGSRTNGFSDASLAIGSM
TVSVQSVLVVVTALVLIGALYVYFGRTIAGKALRATSVNRLGARLVGIGTTEAGRLAFTFAAGLGVLSGILVGPLTTIYY
DSGFLIGLKGFVGAIIGGLVSYPLAAAGSLLVGVLESYSSFWASAYKEVIVFTLIIPVLLWRSFVTPHAEEEEE
>Mature_393_residues
AAAVPPGTTGARRMTRRADRVARAPAVSAFRFSAAFSRYTKRMDLSIAAILAQDGITTGAIYALLSLALVLVFSVTRVIF
IPQGEFVAYGALTLAALQAQKFPATCWLLFVMGIACFLLEVGGLIRHRERRHQLGRTLATLGSRYILLPLAVFAITRSFA
AQPMPMLAQIALTLAIVVPMGPFVYRLVYQPIAEGTTLLLLIVSVAVHFAMVGLGLVMFGAEGSRTNGFSDASLAIGSMT
VSVQSVLVVVTALVLIGALYVYFGRTIAGKALRATSVNRLGARLVGIGTTEAGRLAFTFAAGLGVLSGILVGPLTTIYYD
SGFLIGLKGFVGAIIGGLVSYPLAAAGSLLVGVLESYSSFWASAYKEVIVFTLIIPVLLWRSFVTPHAEEEEE

Specific function: Part Of The Binding-Protein-Dependent Transport System For Branched-Chain Amino Acids. Probably Responsible For The Translocation Of The Substrates Across The Membrane. [C]

COG id: COG0559

COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41790; Mature: 41659

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AAAVPPGTTGARRMTRRADRVARAPAVSAFRFSAAFSRYTKRMDLSIAAILAQDGITTG
CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AIYALLSLALVLVFSVTRVIFIPQGEFVAYGALTLAALQAQKFPATCWLLFVMGIACFLL
HHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EVGGLIRHRERRHQLGRTLATLGSRYILLPLAVFAITRSFAAQPMPMLAQIALTLAIVVP
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
MGPFVYRLVYQPIAEGTTLLLLIVSVAVHFAMVGLGLVMFGAEGSRTNGFSDASLAIGSM
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
TVSVQSVLVVVTALVLIGALYVYFGRTIAGKALRATSVNRLGARLVGIGTTEAGRLAFTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHH
AAGLGVLSGILVGPLTTIYYDSGFLIGLKGFVGAIIGGLVSYPLAAAGSLLVGVLESYSS
HHHHHHHHHHHHHHHHHHEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWASAYKEVIVFTLIIPVLLWRSFVTPHAEEEEE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA