Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688113

Identifier: 116688113

GI number: 116688113

Start: 90949

End: 92106

Strand: Direct

Name: 116688113

Synonym: Bcen2424_0089

Alternate gene names: NA

Gene position: 90949-92106 (Clockwise)

Preceding gene: 116688112

Following gene: 116688114

Centisome position: 2.61

GC content: 66.93

Gene sequence:

>1158_bases
ATGAAGATGAATCGATGGATGGAGGCCCTGCTTGCCGCGGGTCTCGTTTGTGCGGCGGCCACGGCGTCGGCGCAGGTGAA
GATCGGCGTGACGCTGTCGGCTACCGGCCCGGCCGCGTCGCTCGGGATTCCGGAAAAGAACACGATCGCGCTGCTGCCGA
AGGAAATCGCGGGCAAGAGCGTGCAGTACATCGTGCTGGACGACGCGTCCGACACGAGCCGCGCGGTGCAGAACGTGCGC
AAGCTGATCGACGAGGACCACGTCGACGCGATCATCGGCTCGTCCGTCACGCCGAATTCGCTCGCGATGCTCGATCCCGT
GTCGCAGGGCAAGACGCCGGCGATCTCGCTCGCGGCGAGCGCGCAGATCATCGCGCCGATGGACGCGAAGCGCGCATGGA
TGTTCAAGGTGCCGCAGAACGACCAGCTGATGGCCGACGCGATCGCCGGCTACATGGCCAAGCACGGCGTGAAGACGGTC
GGCTTCATCGGCTTCGCCGATGCGTACGGCGACAGCTGGTACAAGACGTTCGACGCGGCGGCCGCGAAGAACGGGCTGAA
GCTCGTGTCGAACGAGCGCTACAACCGGACCGACGCGTCGGTGATGGGGCAGGTGCTGAAGCTGCTGGGCGCGAACCCGG
ATGCGGTGCTGATCGCCGGCTCCGGCACGCCGGCGGCGCTGCCGGCCAAGACGCTGAAGGAGCGCGGCTACAAGGGCAAG
GTGTACCAGACGCACGGCGTCGCGAACAACGATTTCCTGCGCGTGTGCGGCAAGGATTGCGAAGGCGAGATCCTGCCGGC
CGGCCCCGTGCTCGTGACCGACCAGCTGCCCGACTCGAATCCGGTGAAGAAGCCGGCGCTCGGCTACAAGGCCGCGTACG
AGAAGGCCTACGGCGCGGGTTCGCTGTCGACGTTCGGCGGCCATGCGTGGGATGCGGGCCTGCTGCTGCAGCGGGCGATC
CCGGAAGCGCTGAAGAAGGGCCAGCCGGGCACCGAGGCGTTCCGCGAAGCGCTGCGCGCGTCGCTCGAAAGCGTGAAGGA
TCTGCCGGTCTCGCATGGCGTGATCAACATGACGGCGACCGATCACAACGGCTTCGACACGCGTGCGCGCGTGATGGTGC
AGATCGTCGACGGCAAGTGGAAGCTGCAGGCCGAGTAA

Upstream 100 bases:

>100_bases
GGCGCGGATGAGCGTGATAATTAATATATTAACTTGTTTGGGAACGGGGAGCCGCCCGAGCGACCGTGGTTTTTTCGAGC
AGCGTTTGGAGACAACGTAA

Downstream 100 bases:

>100_bases
GCATCACGTGAAACCGGCATGCACGGCGCGAACGGCGCCGCGTGTGCCGTCGGCAGGGTGGCGCGCCTCATGGCCGCCGC
CGTGCCGCCTGGAACCACCG

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: Branched-Chain Amino Acid ABC Transporter; Branched-Chain Amino Acid Transporter; Amino Acid ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKMNRWMEALLAAGLVCAAATASAQVKIGVTLSATGPAASLGIPEKNTIALLPKEIAGKSVQYIVLDDASDTSRAVQNVR
KLIDEDHVDAIIGSSVTPNSLAMLDPVSQGKTPAISLAASAQIIAPMDAKRAWMFKVPQNDQLMADAIAGYMAKHGVKTV
GFIGFADAYGDSWYKTFDAAAAKNGLKLVSNERYNRTDASVMGQVLKLLGANPDAVLIAGSGTPAALPAKTLKERGYKGK
VYQTHGVANNDFLRVCGKDCEGEILPAGPVLVTDQLPDSNPVKKPALGYKAAYEKAYGAGSLSTFGGHAWDAGLLLQRAI
PEALKKGQPGTEAFREALRASLESVKDLPVSHGVINMTATDHNGFDTRARVMVQIVDGKWKLQAE

Sequences:

>Translated_385_residues
MKMNRWMEALLAAGLVCAAATASAQVKIGVTLSATGPAASLGIPEKNTIALLPKEIAGKSVQYIVLDDASDTSRAVQNVR
KLIDEDHVDAIIGSSVTPNSLAMLDPVSQGKTPAISLAASAQIIAPMDAKRAWMFKVPQNDQLMADAIAGYMAKHGVKTV
GFIGFADAYGDSWYKTFDAAAAKNGLKLVSNERYNRTDASVMGQVLKLLGANPDAVLIAGSGTPAALPAKTLKERGYKGK
VYQTHGVANNDFLRVCGKDCEGEILPAGPVLVTDQLPDSNPVKKPALGYKAAYEKAYGAGSLSTFGGHAWDAGLLLQRAI
PEALKKGQPGTEAFREALRASLESVKDLPVSHGVINMTATDHNGFDTRARVMVQIVDGKWKLQAE
>Mature_385_residues
MKMNRWMEALLAAGLVCAAATASAQVKIGVTLSATGPAASLGIPEKNTIALLPKEIAGKSVQYIVLDDASDTSRAVQNVR
KLIDEDHVDAIIGSSVTPNSLAMLDPVSQGKTPAISLAASAQIIAPMDAKRAWMFKVPQNDQLMADAIAGYMAKHGVKTV
GFIGFADAYGDSWYKTFDAAAAKNGLKLVSNERYNRTDASVMGQVLKLLGANPDAVLIAGSGTPAALPAKTLKERGYKGK
VYQTHGVANNDFLRVCGKDCEGEILPAGPVLVTDQLPDSNPVKKPALGYKAAYEKAYGAGSLSTFGGHAWDAGLLLQRAI
PEALKKGQPGTEAFREALRASLESVKDLPVSHGVINMTATDHNGFDTRARVMVQIVDGKWKLQAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40659; Mature: 40659

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMNRWMEALLAAGLVCAAATASAQVKIGVTLSATGPAASLGIPEKNTIALLPKEIAGKS
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEECCHHHCCCC
VQYIVLDDASDTSRAVQNVRKLIDEDHVDAIIGSSVTPNSLAMLDPVSQGKTPAISLAAS
EEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEEECC
AQIIAPMDAKRAWMFKVPQNDQLMADAIAGYMAKHGVKTVGFIGFADAYGDSWYKTFDAA
CEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHCCHHHHHHHHH
AAKNGLKLVSNERYNRTDASVMGQVLKLLGANPDAVLIAGSGTPAALPAKTLKERGYKGK
HHCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCCCCC
VYQTHGVANNDFLRVCGKDCEGEILPAGPVLVTDQLPDSNPVKKPALGYKAAYEKAYGAG
EEEECCCCCCCHHEECCCCCCCCEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCC
SLSTFGGHAWDAGLLLQRAIPEALKKGQPGTEAFREALRASLESVKDLPVSHGVINMTAT
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
DHNGFDTRARVMVQIVDGKWKLQAE
CCCCCCCCEEEEEEEECCEEEEECC
>Mature Secondary Structure
MKMNRWMEALLAAGLVCAAATASAQVKIGVTLSATGPAASLGIPEKNTIALLPKEIAGKS
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEECCHHHCCCC
VQYIVLDDASDTSRAVQNVRKLIDEDHVDAIIGSSVTPNSLAMLDPVSQGKTPAISLAAS
EEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEEECC
AQIIAPMDAKRAWMFKVPQNDQLMADAIAGYMAKHGVKTVGFIGFADAYGDSWYKTFDAA
CEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHCCHHHHHHHHH
AAKNGLKLVSNERYNRTDASVMGQVLKLLGANPDAVLIAGSGTPAALPAKTLKERGYKGK
HHCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCCCCC
VYQTHGVANNDFLRVCGKDCEGEILPAGPVLVTDQLPDSNPVKKPALGYKAAYEKAYGAG
EEEECCCCCCCHHEECCCCCCCCEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCC
SLSTFGGHAWDAGLLLQRAIPEALKKGQPGTEAFREALRASLESVKDLPVSHGVINMTAT
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
DHNGFDTRARVMVQIVDGKWKLQAE
CCCCCCCCEEEEEEEECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA