| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is phhB
Identifier: 116688101
GI number: 116688101
Start: 79021
End: 79329
Strand: Reverse
Name: phhB
Synonym: Bcen2424_0077
Alternate gene names: NA
Gene position: 79329-79021 (Counterclockwise)
Preceding gene: 116688102
Following gene: 116688099
Centisome position: 2.28
GC content: 65.37
Gene sequence:
>309_bases ATGATCCACAAGCTCACATCCGAAGAACGCAAGACCCGGCTCGAAGGCCTGCCGCACTGGACGGCCGTGCCGGGCCGCGA CGCGATCCAGCGCCGCCTGCGCTTCGCCGATTTCAACGAAGCGTTCGGCTTCATGACGCGCGTCGCGATCAAGGCGCAGG AGATGAACCACCATCCGGAATGGTTCAACGTGTACAACCGTGTCGACATCACGCTGTCGACTCACGACGCCGACGGCCTG ACCGAACGCGACATCGAACTCGCGCGGTTCATCGACGGCGCCGCCGCGCACGCGCAACCGGGCGCCTGA
Upstream 100 bases:
>100_bases CGCCCGTCACCCTTTGCGCAACTATGAAACAATGAACGATGCCGGCCTCGCCGCGCGGTGCAGCCGCGCGTGGGCGCCGT TACCGAACGAGAGGTGCAAG
Downstream 100 bases:
>100_bases ATCCCGAGTCCTGCCTCTACCGCCGCGCATCTTTCCGTGCGCGGCGCGTCAACTTTTCATTTCGCTGAACGTTTTCTAGG ATGTACTCAGCGAAAGCCTT
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD [H]
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MIHKLTSEERKTRLEGLPHWTAVPGRDAIQRRLRFADFNEAFGFMTRVAIKAQEMNHHPEWFNVYNRVDITLSTHDADGL TERDIELARFIDGAAAHAQPGA
Sequences:
>Translated_102_residues MIHKLTSEERKTRLEGLPHWTAVPGRDAIQRRLRFADFNEAFGFMTRVAIKAQEMNHHPEWFNVYNRVDITLSTHDADGL TERDIELARFIDGAAAHAQPGA >Mature_102_residues MIHKLTSEERKTRLEGLPHWTAVPGRDAIQRRLRFADFNEAFGFMTRVAIKAQEMNHHPEWFNVYNRVDITLSTHDADGL TERDIELARFIDGAAAHAQPGA
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI134133240, Length=96, Percent_Identity=54.1666666666667, Blast_Score=117, Evalue=2e-27, Organism=Homo sapiens, GI4557831, Length=96, Percent_Identity=57.2916666666667, Blast_Score=117, Evalue=3e-27, Organism=Caenorhabditis elegans, GI115533705, Length=91, Percent_Identity=62.6373626373626, Blast_Score=124, Evalue=7e-30, Organism=Drosophila melanogaster, GI45549100, Length=97, Percent_Identity=50.5154639175258, Blast_Score=108, Evalue=7e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001533 [H]
Pfam domain/function: PF01329 Pterin_4a [H]
EC number: =4.2.1.96 [H]
Molecular weight: Translated: 11683; Mature: 11683
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHKLTSEERKTRLEGLPHWTAVPGRDAIQRRLRFADFNEAFGFMTRVAIKAQEMNHHPE CCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC WFNVYNRVDITLSTHDADGLTERDIELARFIDGAAAHAQPGA HHHHCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MIHKLTSEERKTRLEGLPHWTAVPGRDAIQRRLRFADFNEAFGFMTRVAIKAQEMNHHPE CCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC WFNVYNRVDITLSTHDADGLTERDIELARFIDGAAAHAQPGA HHHHCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA