Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688081

Identifier: 116688081

GI number: 116688081

Start: 57377

End: 57946

Strand: Reverse

Name: 116688081

Synonym: Bcen2424_0057

Alternate gene names: NA

Gene position: 57946-57377 (Counterclockwise)

Preceding gene: 116688082

Following gene: 116688080

Centisome position: 1.66

GC content: 71.23

Gene sequence:

>570_bases
ATGCTCGCCATTCGCACGACCTCCCGCTGCGGCCGCGATTGCCGTGTGCGTCGCGGTGCGGTGCCGTTCGTACCGGCACG
TACCGATGGCGGCCTGATGAAGCACGGCGCGGCACGACGTCGCACGCGCGGCTTCACGCTGCTCGAAATGCTGGTCGTGC
TGGTGATCGCGGGGCTGCTCGTGTCGCTCGCGTCGCTGTCGCTGACGCGCAATCCGCGCACCGACCTGCGCGAGGAAGCG
CAGCGTATCGCGCTGCTGTTCGAGACGGCCGGCGACGAAGCGCAGGTGCGCGCGCGGCCGATCGCGTGGCAGCCGACCGC
GCACGGTTTCCAGTTCGACGTGAGCTCGCCCGACGGCTGGCGCACGCTGCGCGACGACCTGCTGCGCCCGCGCGACTGGG
ACGGCGGCGTCATCGGCGCCGACATCGATTATCCGGGGTCGGACACGCGCGCGAGCCGCGTCGTGTTCGGCACCGAGAGC
ATCGACACGCCGGTGCGCGTGACGCTGCATTCGGCCGCCGGCAGCGCGACGATCATCGGCACCGGCAACGGCCGCTACGA
GGTGCAATGA

Upstream 100 bases:

>100_bases
CGGCGCCGACGGCAAGGAAGGCGGCGACGGCAACGATACCGACATCGGTTCGTGGCAATAGGCCGGCACTGATCGGCCCG
ACGTTTCTTTTCCGTTCTTC

Downstream 100 bases:

>100_bases
CGATGCGTCGTCGCCTGCCCTTCCCCGTTTCTTCCGCCCGCGGCTTCACGATGATCGAGGTGCTGGTCGCGCTCGCGATC
ATCGCGGTCGCGCTCGCCGC

Product: general secretion pathway protein H

Products: NA

Alternate protein names: Type II Secretory Pathway Pseudopilin PulG

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MLAIRTTSRCGRDCRVRRGAVPFVPARTDGGLMKHGAARRRTRGFTLLEMLVVLVIAGLLVSLASLSLTRNPRTDLREEA
QRIALLFETAGDEAQVRARPIAWQPTAHGFQFDVSSPDGWRTLRDDLLRPRDWDGGVIGADIDYPGSDTRASRVVFGTES
IDTPVRVTLHSAAGSATIIGTGNGRYEVQ

Sequences:

>Translated_189_residues
MLAIRTTSRCGRDCRVRRGAVPFVPARTDGGLMKHGAARRRTRGFTLLEMLVVLVIAGLLVSLASLSLTRNPRTDLREEA
QRIALLFETAGDEAQVRARPIAWQPTAHGFQFDVSSPDGWRTLRDDLLRPRDWDGGVIGADIDYPGSDTRASRVVFGTES
IDTPVRVTLHSAAGSATIIGTGNGRYEVQ
>Mature_189_residues
MLAIRTTSRCGRDCRVRRGAVPFVPARTDGGLMKHGAARRRTRGFTLLEMLVVLVIAGLLVSLASLSLTRNPRTDLREEA
QRIALLFETAGDEAQVRARPIAWQPTAHGFQFDVSSPDGWRTLRDDLLRPRDWDGGVIGADIDYPGSDTRASRVVFGTES
IDTPVRVTLHSAAGSATIIGTGNGRYEVQ

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20641; Mature: 20641

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAIRTTSRCGRDCRVRRGAVPFVPARTDGGLMKHGAARRRTRGFTLLEMLVVLVIAGLL
CEEEECCHHCCCCHHHHCCCCCEEECCCCCCHHHCCCHHHHHCCHHHHHHHHHHHHHHHH
VSLASLSLTRNPRTDLREEAQRIALLFETAGDEAQVRARPIAWQPTAHGFQFDVSSPDGW
HHHHHHHCCCCCCHHHHHHHHHEEEEEECCCCCCEEEECCEEECCCCCCEEEECCCCCCH
RTLRDDLLRPRDWDGGVIGADIDYPGSDTRASRVVFGTESIDTPVRVTLHSAAGSATIIG
HHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEE
TGNGRYEVQ
CCCCEEEEC
>Mature Secondary Structure
MLAIRTTSRCGRDCRVRRGAVPFVPARTDGGLMKHGAARRRTRGFTLLEMLVVLVIAGLL
CEEEECCHHCCCCHHHHCCCCCEEECCCCCCHHHCCCHHHHHCCHHHHHHHHHHHHHHHH
VSLASLSLTRNPRTDLREEAQRIALLFETAGDEAQVRARPIAWQPTAHGFQFDVSSPDGW
HHHHHHHCCCCCCHHHHHHHHHEEEEEECCCCCCEEEECCEEECCCCCCEEEECCCCCCH
RTLRDDLLRPRDWDGGVIGADIDYPGSDTRASRVVFGTESIDTPVRVTLHSAAGSATIIG
HHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEE
TGNGRYEVQ
CCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA