Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688080

Identifier: 116688080

GI number: 116688080

Start: 56973

End: 57374

Strand: Reverse

Name: 116688080

Synonym: Bcen2424_0056

Alternate gene names: NA

Gene position: 57374-56973 (Counterclockwise)

Preceding gene: 116688081

Following gene: 116688079

Centisome position: 1.65

GC content: 69.65

Gene sequence:

>402_bases
ATGCGTCGTCGCCTGCCCTTCCCCGTTTCTTCCGCCCGCGGCTTCACGATGATCGAGGTGCTGGTCGCGCTCGCGATCAT
CGCGGTCGCGCTCGCCGCGTCGATCCGCGCGGTCGGCACGATGGCGACCAACGCATCCGAGCTGCATCGCCGCCTGCTGG
CCGGCTGGAGCGCCGACAACGCGCTCGCGCAGCTGCGGCTCACGCATGCGTGGCCGGAGGTCGGCGAACAGAGTTTCGAC
TGCTCGCAAGGCAACGTGCAGCTCGTCTGCACGCAGCGCGTGAGCACCACGCCGAATCCGGTGTTCCGGCGCGTGCGGAT
CTCGGTGAGCATGCCCGGCCGCGCCGGCGTGCTCGCGCAGATGGTGACGGTGGTCGCGAATGAAACCAGCCGTCCGCTCT
GA

Upstream 100 bases:

>100_bases
CCGAGAGCATCGACACGCCGGTGCGCGTGACGCTGCATTCGGCCGCCGGCAGCGCGACGATCATCGGCACCGGCAACGGC
CGCTACGAGGTGCAATGACG

Downstream 100 bases:

>100_bases
CGCGCCGATGCGACGCCCGTCCGCCCTCTCGTCCCGCGCTGCCCGCGGCTTCACGCTGATCGAGCTGATGATCGCGATCG
CGATCATCGCGGTGGTGGCG

Product: general secretion pathway protein I

Products: NA

Alternate protein names: Type II Secretory Pathway Pseudopilin PulG; General Secretory Pathway I Transmembrane Protein

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MRRRLPFPVSSARGFTMIEVLVALAIIAVALAASIRAVGTMATNASELHRRLLAGWSADNALAQLRLTHAWPEVGEQSFD
CSQGNVQLVCTQRVSTTPNPVFRRVRISVSMPGRAGVLAQMVTVVANETSRPL

Sequences:

>Translated_133_residues
MRRRLPFPVSSARGFTMIEVLVALAIIAVALAASIRAVGTMATNASELHRRLLAGWSADNALAQLRLTHAWPEVGEQSFD
CSQGNVQLVCTQRVSTTPNPVFRRVRISVSMPGRAGVLAQMVTVVANETSRPL
>Mature_133_residues
MRRRLPFPVSSARGFTMIEVLVALAIIAVALAASIRAVGTMATNASELHRRLLAGWSADNALAQLRLTHAWPEVGEQSFD
CSQGNVQLVCTQRVSTTPNPVFRRVRISVSMPGRAGVLAQMVTVVANETSRPL

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14367; Mature: 14367

Theoretical pI: Translated: 12.10; Mature: 12.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRLPFPVSSARGFTMIEVLVALAIIAVALAASIRAVGTMATNASELHRRLLAGWSADN
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCH
ALAQLRLTHAWPEVGEQSFDCSQGNVQLVCTQRVSTTPNPVFRRVRISVSMPGRAGVLAQ
HHHHHHHHHCCHHHCCCCCCCCCCCEEEEEECCCCCCCCHHEEEEEEEEECCCCHHHHHH
MVTVVANETSRPL
HHHHHHCCCCCCC
>Mature Secondary Structure
MRRRLPFPVSSARGFTMIEVLVALAIIAVALAASIRAVGTMATNASELHRRLLAGWSADN
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCH
ALAQLRLTHAWPEVGEQSFDCSQGNVQLVCTQRVSTTPNPVFRRVRISVSMPGRAGVLAQ
HHHHHHHHHCCHHHCCCCCCCCCCCEEEEEECCCCCCCCHHEEEEEEEEECCCCHHHHHH
MVTVVANETSRPL
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA