| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688069
Identifier: 116688069
GI number: 116688069
Start: 47146
End: 47532
Strand: Reverse
Name: 116688069
Synonym: Bcen2424_0045
Alternate gene names: NA
Gene position: 47532-47146 (Counterclockwise)
Preceding gene: 116688070
Following gene: 116688067
Centisome position: 1.36
GC content: 61.24
Gene sequence:
>387_bases GTGAAACTGCTGCTCGACACGCACCTGATTCTTTGGGCGGCCGCGGACGCGACCGAATTGCCCGATCGAGCCCGTACGCT CATCGAGGATCCCGCCTATACCCTGTTGTTCAGCGTCGCGAGTCTCTGGGAGATCGTGATCAAGCGTGGGCTCGACCGCA ATGATTTTCAGGTCGATCCGCACGTGCTGCGTCGCAATCTGCTCGACGCCGGCTACGTCGAATCGCCGATCACGAGCGCA CATGTCCTCGCAGTCGAGCAACTGCCGCTGGTGCATCGCGATCCGTTCGATCGGCTGCTGATTGCCCAGGCGATTGCAGA AGGCGTTACGTTTCTCACGCACGACCATACGGTTGCCCGGTATCCGGGCCCGATTCGGCACGTCTGA
Upstream 100 bases:
>100_bases GACCGGCGCGGATCGGTTTCATGAAGGGTCAAATCGTGGTGCCGGCCGACTTCGATACGATGGGTGACGATGCCATCCGG AAGCTGTTCGAGGGCGACGC
Downstream 100 bases:
>100_bases TCACGCCGAGCGGGGGCGCAACCGTCACTCCCGCGCCCGCAATCCCCCGAACGCCAGATCGTCGGCCGGCGCGAGCGGCA GCGTCGCCCGCGCGACGTCG
Product: PilT domain-containing protein
Products: NA
Alternate protein names: PilT Protein Domain Protein; PilT Protein Domain-Containing Protein; PilT Protein-Like Protein; PilT Protein-Like; Pilus Retraction Motor Protein PilT; PIN Domain Family Protein; PilT Protein Domain Containing Protein; PilT-Like Protein; PIN Domain Protein; Xin Of A Toxin/Antitoxin System; PilT Protein N-Terminal
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MKLLLDTHLILWAAADATELPDRARTLIEDPAYTLLFSVASLWEIVIKRGLDRNDFQVDPHVLRRNLLDAGYVESPITSA HVLAVEQLPLVHRDPFDRLLIAQAIAEGVTFLTHDHTVARYPGPIRHV
Sequences:
>Translated_128_residues MKLLLDTHLILWAAADATELPDRARTLIEDPAYTLLFSVASLWEIVIKRGLDRNDFQVDPHVLRRNLLDAGYVESPITSA HVLAVEQLPLVHRDPFDRLLIAQAIAEGVTFLTHDHTVARYPGPIRHV >Mature_128_residues MKLLLDTHLILWAAADATELPDRARTLIEDPAYTLLFSVASLWEIVIKRGLDRNDFQVDPHVLRRNLLDAGYVESPITSA HVLAVEQLPLVHRDPFDRLLIAQAIAEGVTFLTHDHTVARYPGPIRHV
Specific function: Unknown
COG id: COG3744
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14448; Mature: 14448
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLLDTHLILWAAADATELPDRARTLIEDPAYTLLFSVASLWEIVIKRGLDRNDFQVDP CCCHHHHHEEEEECCCCHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH HVLRRNLLDAGYVESPITSAHVLAVEQLPLVHRDPFDRLLIAQAIAEGVTFLTHDHTVAR HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCC YPGPIRHV CCCCCCCC >Mature Secondary Structure MKLLLDTHLILWAAADATELPDRARTLIEDPAYTLLFSVASLWEIVIKRGLDRNDFQVDP CCCHHHHHEEEEECCCCHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH HVLRRNLLDAGYVESPITSAHVLAVEQLPLVHRDPFDRLLIAQAIAEGVTFLTHDHTVAR HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCC YPGPIRHV CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA