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The map label for this gene is fliM [H]

Identifier: 116688064

GI number: 116688064

Start: 43077

End: 44075

Strand: Reverse

Name: fliM [H]

Synonym: Bcen2424_0040

Alternate gene names: 116688064

Gene position: 44075-43077 (Counterclockwise)

Preceding gene: 116688065

Following gene: 116688063

Centisome position: 1.27

GC content: 63.26

Gene sequence:

>999_bases
ATGGGTCACCAGGAGTTCATGTCCCAGGAGGAGGTCGATGCCCTCCTCAAGGGCGTCACGGGCGAAACCGATGCAGTCGA
CGAGCAGCGCGACACATCGGGCGTCCGCCCCTACAACATCGCGACGCAGGAGCGGATCGTCCGCGGCCGGATGCCCGGCC
TCGAGATCATCAACGACCGCTTCGCGCGCCTGTTGCGGATCGGCATCTTCAACTTCATGCGGCGCACGGCGGAAATTTCC
GTCAGCCAGGTGAAGGTGCAGAAGTACAGCGAATTCACCCGCAACCTGCCGATCCCGACCAACCTGAACCTGGTGCACGT
GAAGCCGCTGCGCGGCACGTCGCTGTTCGTGTTCGACCCGAACCTCGTGTTCTTCGTCGTCGACAACCTGTTCGGCGGCG
ACGGGCGCTTTCACACGCGCGTCGAGGGCCGCGATTTCACGGCCACCGAGCAGCGGATCATCGGCAAGCTGCTGAACCTC
GTGTTCGAGCACTACACGACCGCGTGGAAGAGCGTGCGGCCGCTGCAGTTCGAATTCGTGCGTTCCGAGATGCACACGCA
GTTCGCGAACGTCGCGACGCCGAACGAGATCGTGATCGTCACGCAGTTCTCGATCGAGTTCGGGCCGACCGGCGGCACGC
TGCACATCTGCATGCCGTACTCGATGATCGAACCGATCCGCGACGTGCTCAGCTCGCCGATCCAGGGCGAGGCGCTCGAA
GTCGACCGCCGCTGGGTGCGCGTGCTGTCGCAGCAGGTGCAGGCCGCGGAAGTCGAGCTGACCGCGAATCTCGCCGAGAT
CTCGTCGACGTTCGAGAAGATCCTGAACCTGCGCGCGGGCGACGTGCTGCCGCTGGAGATCGAGGACACGATCACCGCGA
AGGTCGACGGCGTGCCGGTGATGGAGTGCGGCTACGGAATTTTCAATGGTCAATATGCGTTGCGCGTGCAGAAGATGATC
GGCGCGAGCGATTCGATGAAGGAAGGTGGATATGAGTGA

Upstream 100 bases:

>100_bases
ATCGAACAGCCGACGCAGCCGGGCAACCAGCGCGCGAAGGTCGACGACGTCCTGTTCACCGAGTTCGTCGTCCAGTAACG
CGGCCGCGAAAGGAGCGCGT

Downstream 100 bases:

>100_bases
GCTGAACCAGACGCCCGACGACGACATCCAGGCGATGGCCGATGCGGCCCTCGCGGCGTCGGCTGCCGACGCGAAGGCGC
CGGCCGCGGCCGAGGAAGAT

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MGHQEFMSQEEVDALLKGVTGETDAVDEQRDTSGVRPYNIATQERIVRGRMPGLEIINDRFARLLRIGIFNFMRRTAEIS
VSQVKVQKYSEFTRNLPIPTNLNLVHVKPLRGTSLFVFDPNLVFFVVDNLFGGDGRFHTRVEGRDFTATEQRIIGKLLNL
VFEHYTTAWKSVRPLQFEFVRSEMHTQFANVATPNEIVIVTQFSIEFGPTGGTLHICMPYSMIEPIRDVLSSPIQGEALE
VDRRWVRVLSQQVQAAEVELTANLAEISSTFEKILNLRAGDVLPLEIEDTITAKVDGVPVMECGYGIFNGQYALRVQKMI
GASDSMKEGGYE

Sequences:

>Translated_332_residues
MGHQEFMSQEEVDALLKGVTGETDAVDEQRDTSGVRPYNIATQERIVRGRMPGLEIINDRFARLLRIGIFNFMRRTAEIS
VSQVKVQKYSEFTRNLPIPTNLNLVHVKPLRGTSLFVFDPNLVFFVVDNLFGGDGRFHTRVEGRDFTATEQRIIGKLLNL
VFEHYTTAWKSVRPLQFEFVRSEMHTQFANVATPNEIVIVTQFSIEFGPTGGTLHICMPYSMIEPIRDVLSSPIQGEALE
VDRRWVRVLSQQVQAAEVELTANLAEISSTFEKILNLRAGDVLPLEIEDTITAKVDGVPVMECGYGIFNGQYALRVQKMI
GASDSMKEGGYE
>Mature_331_residues
GHQEFMSQEEVDALLKGVTGETDAVDEQRDTSGVRPYNIATQERIVRGRMPGLEIINDRFARLLRIGIFNFMRRTAEISV
SQVKVQKYSEFTRNLPIPTNLNLVHVKPLRGTSLFVFDPNLVFFVVDNLFGGDGRFHTRVEGRDFTATEQRIIGKLLNLV
FEHYTTAWKSVRPLQFEFVRSEMHTQFANVATPNEIVIVTQFSIEFGPTGGTLHICMPYSMIEPIRDVLSSPIQGEALEV
DRRWVRVLSQQVQAAEVELTANLAEISSTFEKILNLRAGDVLPLEIEDTITAKVDGVPVMECGYGIFNGQYALRVQKMIG
ASDSMKEGGYE

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=321, Percent_Identity=52.0249221183801, Blast_Score=349, Evalue=1e-97,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 37437; Mature: 37306

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHQEFMSQEEVDALLKGVTGETDAVDEQRDTSGVRPYNIATQERIVRGRMPGLEIINDR
CCHHHHCCHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHH
FARLLRIGIFNFMRRTAEISVSQVKVQKYSEFTRNLPIPTNLNLVHVKPLRGTSLFVFDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECC
NLVFFVVDNLFGGDGRFHTRVEGRDFTATEQRIIGKLLNLVFEHYTTAWKSVRPLQFEFV
CEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RSEMHTQFANVATPNEIVIVTQFSIEFGPTGGTLHICMPYSMIEPIRDVLSSPIQGEALE
HHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCEEEEEECHHHHHHHHHHHCCCCCCCHHH
VDRRWVRVLSQQVQAAEVELTANLAEISSTFEKILNLRAGDVLPLEIEDTITAKVDGVPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCEE
MECGYGIFNGQYALRVQKMIGASDSMKEGGYE
HHCCCCEECCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GHQEFMSQEEVDALLKGVTGETDAVDEQRDTSGVRPYNIATQERIVRGRMPGLEIINDR
CHHHHCCHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHH
FARLLRIGIFNFMRRTAEISVSQVKVQKYSEFTRNLPIPTNLNLVHVKPLRGTSLFVFDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECC
NLVFFVVDNLFGGDGRFHTRVEGRDFTATEQRIIGKLLNLVFEHYTTAWKSVRPLQFEFV
CEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RSEMHTQFANVATPNEIVIVTQFSIEFGPTGGTLHICMPYSMIEPIRDVLSSPIQGEALE
HHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCEEEEEECHHHHHHHHHHHCCCCCCCHHH
VDRRWVRVLSQQVQAAEVELTANLAEISSTFEKILNLRAGDVLPLEIEDTITAKVDGVPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCEE
MECGYGIFNGQYALRVQKMIGASDSMKEGGYE
HHCCCCEECCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3519573; 9097040; 9278503; 2651416 [H]