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The map label for this gene is 116688053

Identifier: 116688053

GI number: 116688053

Start: 33540

End: 34667

Strand: Reverse

Name: 116688053

Synonym: Bcen2424_0029

Alternate gene names: NA

Gene position: 34667-33540 (Counterclockwise)

Preceding gene: 116688054

Following gene: 116688052

Centisome position: 1.0

GC content: 64.45

Gene sequence:

>1128_bases
TTGAAACGAAAAACCCTTGCCCTTTCCATCGCGGCGGCAGGCCTGTGCGCCGGCCACGCGCATGCGCAGTCGAGCGTGCA
GCTCTACGGCCTGATGGACCTGAGCTTTCCGACCTACCGGACCCACGCCGACGCGAACGGCAAACACGTGATCGGGATGG
GCAACGAAGGCGAACCGTGGTTCAGCGGCAGCCGCTGGGGCCTGCGCGGCGCCGAAGACATCGGCGGCGGCACGAAGATC
ATCTTCCGCCTCGAAAGCGAATTCGTGGTCGCGAACGGCCAGATGGAAGACGAAGGCCAGATCTTCGACCGCGACGCGTG
GGTCGGCGTCGAGGACGAGCGCTTCGGCAAGCTGACGGCCGGCTTCCAGAACACGATCGCGCGCGATGCGGCGACGATCT
ACGGCGACGCGTACGGCTCCGCGAGACTGTCGACCGAGGAAGGCGGCTGGACCAACTCGAACAACTTCAAGCAGATGATC
TTCTACGCGGCCGGCCCGACCGGCACGCGCTACAACAACGGCGTCGCGTGGAAGAAGCTGTTCAGCAACGGCATCTTCGC
GAGCGCCGGCTACCAGTTCAGCAACTCGACGTCGTTTGCGACCGGCTCCGCGTACCAGGCCGCGCTCGGCTACAACGGCG
GGCCGTTCAACGTGTCGGGCTTCTACAACCACGTGAACCACAACGGCTTCCGGAACCAGACGTTCTCGGTCGGCGGCAAC
TACACGTTCGACATCGTGCGGCTGAATGCCGGCTACTTCCGCTACAACGGTGACCAGGGCCCGCTCGGCCAGCGTCACGA
CGATTCGTGGACGGTGTCGATGAAGATCGCGCCGAAGGGCGCGCTCGACTACGAGCTCGGCTACCAGCAGATGCGCATCA
AGAACGCCGCGAACAACGCGGACGGCTTCACGCCGAACGCGAACCTCGGCGCGTTCAGCCTGACCAACGGCGTCGCCAAC
GGCTTCAAGGAGACGATCTACGGGTCGGTGTTCTACCACCTGAGCAAGCGCACCGAGGTGTACCTGGCCGGCGACTACAT
GAAGCTGCACGGCGGCTACACGGTGTCGTCGACGTTCGGCGCGAAGAACCAGCTCGAACTGACGTCGGGCATCCGCACGC
GTTTCTGA

Upstream 100 bases:

>100_bases
ATGCTACGCGTCGGCCCTCTCGCTGTGGCCGGCAAGCGTCGGCATACATTACGTACTGCCAACGACCGGATTCCAATGCG
GCAGCTCGGAGGAGACGATC

Downstream 100 bases:

>100_bases
TCCGAGGCGGTCATCCGGGCGGGGTTCGTCGAGCCCTGCCGCCCCCTCCCTCCGGGATGCTCCATGCAGGCACGCCGGCG
CACGACGCCGACCGTGCCCT

Product: outer membrane protein (porin)-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MKRKTLALSIAAAGLCAGHAHAQSSVQLYGLMDLSFPTYRTHADANGKHVIGMGNEGEPWFSGSRWGLRGAEDIGGGTKI
IFRLESEFVVANGQMEDEGQIFDRDAWVGVEDERFGKLTAGFQNTIARDAATIYGDAYGSARLSTEEGGWTNSNNFKQMI
FYAAGPTGTRYNNGVAWKKLFSNGIFASAGYQFSNSTSFATGSAYQAALGYNGGPFNVSGFYNHVNHNGFRNQTFSVGGN
YTFDIVRLNAGYFRYNGDQGPLGQRHDDSWTVSMKIAPKGALDYELGYQQMRIKNAANNADGFTPNANLGAFSLTNGVAN
GFKETIYGSVFYHLSKRTEVYLAGDYMKLHGGYTVSSTFGAKNQLELTSGIRTRF

Sequences:

>Translated_375_residues
MKRKTLALSIAAAGLCAGHAHAQSSVQLYGLMDLSFPTYRTHADANGKHVIGMGNEGEPWFSGSRWGLRGAEDIGGGTKI
IFRLESEFVVANGQMEDEGQIFDRDAWVGVEDERFGKLTAGFQNTIARDAATIYGDAYGSARLSTEEGGWTNSNNFKQMI
FYAAGPTGTRYNNGVAWKKLFSNGIFASAGYQFSNSTSFATGSAYQAALGYNGGPFNVSGFYNHVNHNGFRNQTFSVGGN
YTFDIVRLNAGYFRYNGDQGPLGQRHDDSWTVSMKIAPKGALDYELGYQQMRIKNAANNADGFTPNANLGAFSLTNGVAN
GFKETIYGSVFYHLSKRTEVYLAGDYMKLHGGYTVSSTFGAKNQLELTSGIRTRF
>Mature_375_residues
MKRKTLALSIAAAGLCAGHAHAQSSVQLYGLMDLSFPTYRTHADANGKHVIGMGNEGEPWFSGSRWGLRGAEDIGGGTKI
IFRLESEFVVANGQMEDEGQIFDRDAWVGVEDERFGKLTAGFQNTIARDAATIYGDAYGSARLSTEEGGWTNSNNFKQMI
FYAAGPTGTRYNNGVAWKKLFSNGIFASAGYQFSNSTSFATGSAYQAALGYNGGPFNVSGFYNHVNHNGFRNQTFSVGGN
YTFDIVRLNAGYFRYNGDQGPLGQRHDDSWTVSMKIAPKGALDYELGYQQMRIKNAANNADGFTPNANLGAFSLTNGVAN
GFKETIYGSVFYHLSKRTEVYLAGDYMKLHGGYTVSSTFGAKNQLELTSGIRTRF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40834; Mature: 40834

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS00099 THIOLASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKTLALSIAAAGLCAGHAHAQSSVQLYGLMDLSFPTYRTHADANGKHVIGMGNEGEPW
CCCCEEEEEEEHHHHHHCCCCCCCCEEEEEEEECCCCCEEEECCCCCCEEEEECCCCCCC
FSGSRWGLRGAEDIGGGTKIIFRLESEFVVANGQMEDEGQIFDRDAWVGVEDERFGKLTA
CCCCCCCCCCCHHCCCCEEEEEEEECCEEEECCCCCCCCCEECCCCEECCCHHHCCEECC
GFQNTIARDAATIYGDAYGSARLSTEEGGWTNSNNFKQMIFYAAGPTGTRYNNGVAWKKL
CHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHH
FSNGIFASAGYQFSNSTSFATGSAYQAALGYNGGPFNVSGFYNHVNHNGFRNQTFSVGGN
HCCCCEEECCCEECCCCCCCCCCCEEEEECCCCCCEECCHHHHCCCCCCCCCCEEECCCC
YTFDIVRLNAGYFRYNGDQGPLGQRHDDSWTVSMKIAPKGALDYELGYQQMRIKNAANNA
EEEEEEEEECCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCHHCCHHHEEEECCCCCC
DGFTPNANLGAFSLTNGVANGFKETIYGSVFYHLSKRTEVYLAGDYMKLHGGYTVSSTFG
CCCCCCCCCCEEEECHHHHHHHHHHHHHEEEEEECCCEEEEEEECEEEEECCEEEEECCC
AKNQLELTSGIRTRF
CCCEEEECCCHHCCC
>Mature Secondary Structure
MKRKTLALSIAAAGLCAGHAHAQSSVQLYGLMDLSFPTYRTHADANGKHVIGMGNEGEPW
CCCCEEEEEEEHHHHHHCCCCCCCCEEEEEEEECCCCCEEEECCCCCCEEEEECCCCCCC
FSGSRWGLRGAEDIGGGTKIIFRLESEFVVANGQMEDEGQIFDRDAWVGVEDERFGKLTA
CCCCCCCCCCCHHCCCCEEEEEEEECCEEEECCCCCCCCCEECCCCEECCCHHHCCEECC
GFQNTIARDAATIYGDAYGSARLSTEEGGWTNSNNFKQMIFYAAGPTGTRYNNGVAWKKL
CHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHH
FSNGIFASAGYQFSNSTSFATGSAYQAALGYNGGPFNVSGFYNHVNHNGFRNQTFSVGGN
HCCCCEEECCCEECCCCCCCCCCCEEEEECCCCCCEECCHHHHCCCCCCCCCCEEECCCC
YTFDIVRLNAGYFRYNGDQGPLGQRHDDSWTVSMKIAPKGALDYELGYQQMRIKNAANNA
EEEEEEEEECCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCHHCCHHHEEEECCCCCC
DGFTPNANLGAFSLTNGVANGFKETIYGSVFYHLSKRTEVYLAGDYMKLHGGYTVSSTFG
CCCCCCCCCCEEEECHHHHHHHHHHHHHEEEEEECCCEEEEEEECEEEEECCEEEEECCC
AKNQLELTSGIRTRF
CCCEEEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]