| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688039
Identifier: 116688039
GI number: 116688039
Start: 19796
End: 20053
Strand: Reverse
Name: 116688039
Synonym: Bcen2424_0015
Alternate gene names: NA
Gene position: 20053-19796 (Counterclockwise)
Preceding gene: 116688040
Following gene: 116688038
Centisome position: 0.58
GC content: 59.3
Gene sequence:
>258_bases ATGACGTACACGGTCCTGATGGTGTCGCGCGGCGAAATCGTGCTGTCCGACGGAAAGCGGACCGTGCGGGCGCCTGGCGA GGCATTGTCGTCCGGCGTGGACAACGGTCCCGCATTCGTCGTCTATGTCGATTCGATGAAGTACGTCGAGCCCCAAGGCG ATGGCGAGACGATCGATAACGCCACTCGCGAGGCGGTGATCTCGGCGATCACCGACTATTTTTTGTCGCGACGTACAACG GTTGATTTCGAATCCTGA
Upstream 100 bases:
>100_bases GGAGATCGGTGTCGTTCGAAGTGGTTACCGTTCGGTTGCATGGCGCGGGCCGTCGCAATACGTGGTCGAACGACATGACT GAATCACACGAGGCAACGCG
Downstream 100 bases:
>100_bases GCCAGTCACGAAACCCGGGAAAGAGCGGGGTGATGCGAGCGGCGCTTGCAAAGGGAGCAGGTAATGGGACCGATCATGTG CCGCCCGCACGGACACGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MTYTVLMVSRGEIVLSDGKRTVRAPGEALSSGVDNGPAFVVYVDSMKYVEPQGDGETIDNATREAVISAITDYFLSRRTT VDFES
Sequences:
>Translated_85_residues MTYTVLMVSRGEIVLSDGKRTVRAPGEALSSGVDNGPAFVVYVDSMKYVEPQGDGETIDNATREAVISAITDYFLSRRTT VDFES >Mature_84_residues TYTVLMVSRGEIVLSDGKRTVRAPGEALSSGVDNGPAFVVYVDSMKYVEPQGDGETIDNATREAVISAITDYFLSRRTTV DFES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9254; Mature: 9123
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYTVLMVSRGEIVLSDGKRTVRAPGEALSSGVDNGPAFVVYVDSMKYVEPQGDGETIDN CEEEEEEEECCCEEEECCCEEEECCCHHHHCCCCCCCEEEEEECCEEEECCCCCCCCCCH ATREAVISAITDYFLSRRTTVDFES HHHHHHHHHHHHHHHCCCCEECCCC >Mature Secondary Structure TYTVLMVSRGEIVLSDGKRTVRAPGEALSSGVDNGPAFVVYVDSMKYVEPQGDGETIDN EEEEEEEECCCEEEECCCEEEECCCHHHHCCCCCCCEEEEEECCEEEECCCCCCCCCCH ATREAVISAITDYFLSRRTTVDFES HHHHHHHHHHHHHHHCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA