| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688038
Identifier: 116688038
GI number: 116688038
Start: 19296
End: 19613
Strand: Reverse
Name: 116688038
Synonym: Bcen2424_0014
Alternate gene names: NA
Gene position: 19613-19296 (Counterclockwise)
Preceding gene: 116688039
Following gene: 116688034
Centisome position: 0.56
GC content: 58.81
Gene sequence:
>318_bases ATGAGTACGTTGAATTTCGGCACGGTCGACCAGTGTTCGGTCACGCTCAACACAGCGACGCTGCTGGGCCTGAAGGCTGC CTACGAAGACTTTGCGGCGACCGGGCAGGATCTGCATAACTTCGAGATCTGCATCACGGATAAAAGGGCATCCACGGTGG ACCCCATGCCGGATGATGATGTCGTCACCATCACGTTCGTGGCAAAGCTGATTCCGGGCATGCGCGGACTGGGCAACGCG AACCGACTCGGGAAGTCGATCCACTACGTCATCGCGCCGGAAACCGGCGAGATTCTCGGGAGAGTCGGGACGAAGTGA
Upstream 100 bases:
>100_bases GCCCGCACGGACACGATAACGGGATCACGATATCCGCGGGCATTGCCGCGCGCATCCGGCAGTGCGGACAGTTTTCGCCC GGTGATATTCGGAGAACACG
Downstream 100 bases:
>100_bases CCCGAAGCGTAAGCGGCGGTGTGTGGATAACCGGCGCACGATCCAGTTGAAACCCTGTGCATGCGAGCGGTGAGCGTCCC GGTTTCGATGGGCTCGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MSTLNFGTVDQCSVTLNTATLLGLKAAYEDFAATGQDLHNFEICITDKRASTVDPMPDDDVVTITFVAKLIPGMRGLGNA NRLGKSIHYVIAPETGEILGRVGTK
Sequences:
>Translated_105_residues MSTLNFGTVDQCSVTLNTATLLGLKAAYEDFAATGQDLHNFEICITDKRASTVDPMPDDDVVTITFVAKLIPGMRGLGNA NRLGKSIHYVIAPETGEILGRVGTK >Mature_104_residues STLNFGTVDQCSVTLNTATLLGLKAAYEDFAATGQDLHNFEICITDKRASTVDPMPDDDVVTITFVAKLIPGMRGLGNAN RLGKSIHYVIAPETGEILGRVGTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11214; Mature: 11083
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLNFGTVDQCSVTLNTATLLGLKAAYEDFAATGQDLHNFEICITDKRASTVDPMPDDD CCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCC VVTITFVAKLIPGMRGLGNANRLGKSIHYVIAPETGEILGRVGTK EEHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCC >Mature Secondary Structure STLNFGTVDQCSVTLNTATLLGLKAAYEDFAATGQDLHNFEICITDKRASTVDPMPDDD CCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCC VVTITFVAKLIPGMRGLGNANRLGKSIHYVIAPETGEILGRVGTK EEHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA