| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116626942
Identifier: 116626942
GI number: 116626942
Start: 9930384
End: 9931310
Strand: Direct
Name: 116626942
Synonym: Acid_7919
Alternate gene names: NA
Gene position: 9930384-9931310 (Clockwise)
Preceding gene: 116626939
Following gene: 116626943
Centisome position: 99.65
GC content: 56.53
Gene sequence:
>927_bases ATGCGCCGCGTTTGGTATACCGTACTGCTCGTCTGCCTGGCCGCCGCGGGACTTACGTCCTGCATTGCCCGGCGGCGGCT GATCGCGCGCAAAGGGGCGAGCAATTCACAACAGCAATTGCTGACGGCGGACCGCCAGACGCTGATCGACACGATTGTCC GCGAGTATGAAGCGGTGGATAATTTCAACGCCGAAGTCGATATGGTGCCGGCGCTGGGCAGCGTGGAGAAGAGCAAGATC ACGGAATACAAGGATGTGCGCGCGTATGTGCTGTTTCGAAAACCAGCGGATATCCGGCTGATCGGTCTATACCCGGTGGT GCGCAACAAGGCCTTCGATATGGTCTCCAACGGGGAGCAGTTCAAGCTGTTCGTACCCTCGAAAAATCTCTTTCTGGTGG GAAAGAACGAAATCGAAGCCCCCTCGAAGAACAAAATGGAGAATCTGCGGCCGCAGCATTTCCTGGACGCAATGCTGGTG AAACCGATCGACACCGTCCACGATAAGGTGCTGCTGATGAACCTGACCGATGAGGACAATGCCTTCTATATCCTTCCCGT GGTGCATGATAACGGCAACGGTCAACTGGTATTGACTCGCAGCGTGTGGTTCAACCGTTACAACCTGACGATTGCGCGGC AGTTCATTTTCGACGCGACCGGCAACATCCTCACCGACGCGCGTTACAGCGATTGGAAGAATTACGACAACGTGCCGTTT CCGAAGCACATCGAGATCAACCGGCCGCGCGATGAATATGCGGTGGTGATCGACATCGTCAAGATGGATATCAACAAGGG AGTCGGCACGGATAAGTTCGCACTGGAACAGCCGGAGGGCACTACGCGGCAGGTAGTCGGAGAGGCGCCGCCCGCCGATA CCAAGCCTGCGCCGCCGGCGACCAAAGGAAGAGTCAAGAAAAAGTGA
Upstream 100 bases:
>100_bases GGGTCATGCTGTCCGTAACTTAATATAGCACATCGGTCCCGAGGTGGAAGCAAACGTCGTTCATTGACAGGGCGCTTCGC GCGCCGACTACAATGAAACA
Downstream 100 bases:
>100_bases CAGGTAAGCTGGTTTTCGAAAATATCAAGCATAAGCCGATGCGCAGCCTGCTGAGCATCCTGCTGATCGGCGTGCCGGTG ACGTTGATTCTCTGCCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MRRVWYTVLLVCLAAAGLTSCIARRRLIARKGASNSQQQLLTADRQTLIDTIVREYEAVDNFNAEVDMVPALGSVEKSKI TEYKDVRAYVLFRKPADIRLIGLYPVVRNKAFDMVSNGEQFKLFVPSKNLFLVGKNEIEAPSKNKMENLRPQHFLDAMLV KPIDTVHDKVLLMNLTDEDNAFYILPVVHDNGNGQLVLTRSVWFNRYNLTIARQFIFDATGNILTDARYSDWKNYDNVPF PKHIEINRPRDEYAVVIDIVKMDINKGVGTDKFALEQPEGTTRQVVGEAPPADTKPAPPATKGRVKKK
Sequences:
>Translated_308_residues MRRVWYTVLLVCLAAAGLTSCIARRRLIARKGASNSQQQLLTADRQTLIDTIVREYEAVDNFNAEVDMVPALGSVEKSKI TEYKDVRAYVLFRKPADIRLIGLYPVVRNKAFDMVSNGEQFKLFVPSKNLFLVGKNEIEAPSKNKMENLRPQHFLDAMLV KPIDTVHDKVLLMNLTDEDNAFYILPVVHDNGNGQLVLTRSVWFNRYNLTIARQFIFDATGNILTDARYSDWKNYDNVPF PKHIEINRPRDEYAVVIDIVKMDINKGVGTDKFALEQPEGTTRQVVGEAPPADTKPAPPATKGRVKKK >Mature_308_residues MRRVWYTVLLVCLAAAGLTSCIARRRLIARKGASNSQQQLLTADRQTLIDTIVREYEAVDNFNAEVDMVPALGSVEKSKI TEYKDVRAYVLFRKPADIRLIGLYPVVRNKAFDMVSNGEQFKLFVPSKNLFLVGKNEIEAPSKNKMENLRPQHFLDAMLV KPIDTVHDKVLLMNLTDEDNAFYILPVVHDNGNGQLVLTRSVWFNRYNLTIARQFIFDATGNILTDARYSDWKNYDNVPF PKHIEINRPRDEYAVVIDIVKMDINKGVGTDKFALEQPEGTTRQVVGEAPPADTKPAPPATKGRVKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34938; Mature: 34938
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVWYTVLLVCLAAAGLTSCIARRRLIARKGASNSQQQLLTADRQTLIDTIVREYEAVD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NFNAEVDMVPALGSVEKSKITEYKDVRAYVLFRKPADIRLIGLYPVVRNKAFDMVSNGEQ CCCCCEEEECCCCCCCHHHHHHHHCCEEEEEEECCCCEEEEEEEHHHHCCHHHHHCCCCE FKLFVPSKNLFLVGKNEIEAPSKNKMENLRPQHFLDAMLVKPIDTVHDKVLLMNLTDEDN EEEEECCCCEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHCCHHHHCCEEEEEEECCCCC AFYILPVVHDNGNGQLVLTRSVWFNRYNLTIARQFIFDATGNILTDARYSDWKNYDNVPF EEEEEEEEEECCCCEEEEEEHHEEEEEEHEEEEEEHHHCCCCEEECCCCCCCCCCCCCCC PKHIEINRPRDEYAVVIDIVKMDINKGVGTDKFALEQPEGTTRQVVGEAPPADTKPAPPA CCEEECCCCCCCEEEEEEEEEEHHCCCCCCCCEEEECCCCCHHHHCCCCCCCCCCCCCCC TKGRVKKK CCCCCCCC >Mature Secondary Structure MRRVWYTVLLVCLAAAGLTSCIARRRLIARKGASNSQQQLLTADRQTLIDTIVREYEAVD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NFNAEVDMVPALGSVEKSKITEYKDVRAYVLFRKPADIRLIGLYPVVRNKAFDMVSNGEQ CCCCCEEEECCCCCCCHHHHHHHHCCEEEEEEECCCCEEEEEEEHHHHCCHHHHHCCCCE FKLFVPSKNLFLVGKNEIEAPSKNKMENLRPQHFLDAMLVKPIDTVHDKVLLMNLTDEDN EEEEECCCCEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHCCHHHHCCEEEEEEECCCCC AFYILPVVHDNGNGQLVLTRSVWFNRYNLTIARQFIFDATGNILTDARYSDWKNYDNVPF EEEEEEEEEECCCCEEEEEEHHEEEEEEHEEEEEEHHHCCCCEEECCCCCCCCCCCCCCC PKHIEINRPRDEYAVVIDIVKMDINKGVGTDKFALEQPEGTTRQVVGEAPPADTKPAPPA CCEEECCCCCCCEEEEEEEEEEHHCCCCCCCCEEEECCCCCHHHHCCCCCCCCCCCCCCC TKGRVKKK CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA