| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is acsA [H]
Identifier: 116626871
GI number: 116626871
Start: 9842029
End: 9843861
Strand: Direct
Name: acsA [H]
Synonym: Acid_7846
Alternate gene names: 116626871
Gene position: 9842029-9843861 (Clockwise)
Preceding gene: 116626869
Following gene: 116626872
Centisome position: 98.76
GC content: 63.39
Gene sequence:
>1833_bases ATGGATGGAAAGATGATCTGGACTCCGACTCGGGAATTTGTGGAGACCACGAACGTATGGCGATTGATGAAGCGCCTGGG GTTTGACGACCGCGAAGAGTTCCTGCGTTTCTCACGCGAGAATCCGGAGCGATTCTGGGGCGAGATGATGCGTGAAATGC GTGTGGAGTGGTTCACGCCTTACTCGAAAGAGCTAGACCTCTCGGGCGGCCCGGAATGGGCGCGCTGGTTCATCGGCGGG CGTTTGAACATCGCGCATAATTGCCTCGACCGCTGGGCGGACAGCGATTGCGCGGCTTGTATCTGGGAGGGCGAGAGCGG CGCGGGCGGCACATTGACATTCCGCGAACTCCGCGAGCAGGCCAATCGCACGGCGAACGGGCTGCGGGCGCTCGGTCTGG AAGCGGGCGACCGGGTAGCGCTGTGTCTGCCGATGACGCCGGAGATCCTGCCGATTCTCTATGGATGCTTCAAGGCCGGG CTCACGGTGGTGCCGATTTTCGCGGGTTTCGGCACCGGCGCGATTGCGACGCGGTTGATTGACTCGGGCGCATGCGTGTT GTTCACGGCGGAATTTTTGGAGCGGCGCGGCAAGCGGATTCCGCTGGCGGCCAAGATGCCGGAGTTCGCTGGAAGGACTA TCGTGCTGGGCAGCGAGTGGCAGGAATTCCTGGCGAGTCAGCCGGCGGAGTTCGCGACGGAATCACTGGAGGCGGAGGCT CGCGCCTTCATCCTGTATACTTCGGGGACCACGGGCAAGCCGAAGGGCACGGTGCACACGCACGCGGGATCGCTGGCTCA GATGGGGAAGGAGATCTGGCTGGGCTTCGATCATCGAGAAGGGGAGCGGTTTTTCTGGCTGAGCGACATCGGCTGGATGA TGGGACCGTGGACCATTCTGGGGAACCACCTGTTCGGCGGCACGATTTTTCTATACGACGGCGCGCCCGATTATCCGGGG CCGATGCGGTTATGGGAGACGATCGACCGGCACCGGATCACGACGTTCGGAGTTTCGCCGACCGCGATCCGCGTCCTCCG GAAATCGCCGGGCGAGCTGCCGGCGATGGAGTCGCTGCGGCTGCTGGGCTCGACTGGGGAGCCTTGGGACGATGCCTCGT GGCTGTGGTTTTTCGAGCGAGTGGGCCGGAGGCGCTGCCCGATCATCAACATTTCAGGCGGCACCGAGATCGTGGGCAGC TTCCTGTTTCCACTGCCGATTCAGGCGTTGAAACCAAGCAGCCTGGGCGGTCCGGCGCCAGGCATGTCCACGGAGGTGGT GGACGAGAGCGGAGTTCCGGTGCGTGGGCGCAAGGGCTACCTGGTGTGCACGCGGCCGGCGCCTTCCATGACGCGGGGGA TCTGGGGCGACCCGGAGAGGTACATCGAGACGTATTGGAGCAAGTTCCCGGGCATGTGGTATCACGGCGATTGGGCTAGC GTGGATGAAGACGGCCACTGGTTTCTTCACGGGCGCGCCGACGAATCGATGAACGTAGCGGGACGGAAGGTGGGTCCAGC GGAGGTCGAAGAGGCGATGATGCAGCATCCGGACGTGGCGGAGGCAGCGGTGATCGGCGTCCCGGACGAGTTGAAGGGCG AGACCATCGTGGGCTTCGCGGTGGCGAAGGCGGGGACTGTTTTGGATGCAGCGGCGGTGGTCAGGACTGTGGTAGAAGTG CTCGGCCCTACGTTCCGGCCGCGCGAGATCGTGGTGGTGACGGAGTTGCCGAAGACGCAGAGCGGGAAGATCGTGCGGCG TTTAATTCGCCAGAAGTATCTGGGAGAAGAGCTGGGAGATCTCTCGACCGTGGCGAATCCGTGGGCTTTGTGA
Upstream 100 bases:
>100_bases AGCCGAGGTTTCATGACAACCTGAAACAGATTAAACGTTATATCTATTAAACCAGGAGTTGCACAAAATTTCTTGAGAGT CTGAGACTTTGAGGATACCG
Downstream 100 bases:
>100_bases GCAGAACTCGATATCCGATTCATAACTCCCTGGCGGCTTTTGGGTTAACCATATGGGTACTGGAACCGGCAGGTAAGGTC GTGTATATTCCGATCGGATG
Product: AMP-dependent synthetase and ligase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acyl-activating enzyme [H]
Number of amino acids: Translated: 610; Mature: 610
Protein sequence:
>610_residues MDGKMIWTPTREFVETTNVWRLMKRLGFDDREEFLRFSRENPERFWGEMMREMRVEWFTPYSKELDLSGGPEWARWFIGG RLNIAHNCLDRWADSDCAACIWEGESGAGGTLTFRELREQANRTANGLRALGLEAGDRVALCLPMTPEILPILYGCFKAG LTVVPIFAGFGTGAIATRLIDSGACVLFTAEFLERRGKRIPLAAKMPEFAGRTIVLGSEWQEFLASQPAEFATESLEAEA RAFILYTSGTTGKPKGTVHTHAGSLAQMGKEIWLGFDHREGERFFWLSDIGWMMGPWTILGNHLFGGTIFLYDGAPDYPG PMRLWETIDRHRITTFGVSPTAIRVLRKSPGELPAMESLRLLGSTGEPWDDASWLWFFERVGRRRCPIINISGGTEIVGS FLFPLPIQALKPSSLGGPAPGMSTEVVDESGVPVRGRKGYLVCTRPAPSMTRGIWGDPERYIETYWSKFPGMWYHGDWAS VDEDGHWFLHGRADESMNVAGRKVGPAEVEEAMMQHPDVAEAAVIGVPDELKGETIVGFAVAKAGTVLDAAAVVRTVVEV LGPTFRPREIVVVTELPKTQSGKIVRRLIRQKYLGEELGDLSTVANPWAL
Sequences:
>Translated_610_residues MDGKMIWTPTREFVETTNVWRLMKRLGFDDREEFLRFSRENPERFWGEMMREMRVEWFTPYSKELDLSGGPEWARWFIGG RLNIAHNCLDRWADSDCAACIWEGESGAGGTLTFRELREQANRTANGLRALGLEAGDRVALCLPMTPEILPILYGCFKAG LTVVPIFAGFGTGAIATRLIDSGACVLFTAEFLERRGKRIPLAAKMPEFAGRTIVLGSEWQEFLASQPAEFATESLEAEA RAFILYTSGTTGKPKGTVHTHAGSLAQMGKEIWLGFDHREGERFFWLSDIGWMMGPWTILGNHLFGGTIFLYDGAPDYPG PMRLWETIDRHRITTFGVSPTAIRVLRKSPGELPAMESLRLLGSTGEPWDDASWLWFFERVGRRRCPIINISGGTEIVGS FLFPLPIQALKPSSLGGPAPGMSTEVVDESGVPVRGRKGYLVCTRPAPSMTRGIWGDPERYIETYWSKFPGMWYHGDWAS VDEDGHWFLHGRADESMNVAGRKVGPAEVEEAMMQHPDVAEAAVIGVPDELKGETIVGFAVAKAGTVLDAAAVVRTVVEV LGPTFRPREIVVVTELPKTQSGKIVRRLIRQKYLGEELGDLSTVANPWAL >Mature_610_residues MDGKMIWTPTREFVETTNVWRLMKRLGFDDREEFLRFSRENPERFWGEMMREMRVEWFTPYSKELDLSGGPEWARWFIGG RLNIAHNCLDRWADSDCAACIWEGESGAGGTLTFRELREQANRTANGLRALGLEAGDRVALCLPMTPEILPILYGCFKAG LTVVPIFAGFGTGAIATRLIDSGACVLFTAEFLERRGKRIPLAAKMPEFAGRTIVLGSEWQEFLASQPAEFATESLEAEA RAFILYTSGTTGKPKGTVHTHAGSLAQMGKEIWLGFDHREGERFFWLSDIGWMMGPWTILGNHLFGGTIFLYDGAPDYPG PMRLWETIDRHRITTFGVSPTAIRVLRKSPGELPAMESLRLLGSTGEPWDDASWLWFFERVGRRRCPIINISGGTEIVGS FLFPLPIQALKPSSLGGPAPGMSTEVVDESGVPVRGRKGYLVCTRPAPSMTRGIWGDPERYIETYWSKFPGMWYHGDWAS VDEDGHWFLHGRADESMNVAGRKVGPAEVEEAMMQHPDVAEAAVIGVPDELKGETIVGFAVAKAGTVLDAAAVVRTVVEV LGPTFRPREIVVVTELPKTQSGKIVRRLIRQKYLGEELGDLSTVANPWAL
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI8923896, Length=666, Percent_Identity=33.1831831831832, Blast_Score=330, Evalue=2e-90, Organism=Homo sapiens, GI28416953, Length=602, Percent_Identity=35.3820598006645, Blast_Score=327, Evalue=2e-89, Organism=Homo sapiens, GI253970489, Length=398, Percent_Identity=38.6934673366834, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI13375727, Length=614, Percent_Identity=28.3387622149837, Blast_Score=229, Evalue=7e-60, Organism=Homo sapiens, GI31982927, Length=626, Percent_Identity=26.1980830670927, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI38505220, Length=559, Percent_Identity=28.0858676207513, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI42544132, Length=545, Percent_Identity=27.3394495412844, Blast_Score=172, Evalue=9e-43, Organism=Homo sapiens, GI115511026, Length=561, Percent_Identity=27.4509803921569, Blast_Score=171, Evalue=3e-42, Organism=Homo sapiens, GI58082049, Length=566, Percent_Identity=29.1519434628975, Blast_Score=167, Evalue=3e-41, Organism=Homo sapiens, GI157311624, Length=563, Percent_Identity=29.3072824156306, Blast_Score=167, Evalue=4e-41, Organism=Homo sapiens, GI157311622, Length=563, Percent_Identity=29.3072824156306, Blast_Score=167, Evalue=4e-41, Organism=Homo sapiens, GI122937307, Length=552, Percent_Identity=26.9927536231884, Blast_Score=154, Evalue=3e-37, Organism=Homo sapiens, GI187761345, Length=550, Percent_Identity=26.1818181818182, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI187761343, Length=550, Percent_Identity=26.1818181818182, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI42544134, Length=390, Percent_Identity=25.3846153846154, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI156151445, Length=521, Percent_Identity=23.4165067178503, Blast_Score=93, Evalue=9e-19, Organism=Escherichia coli, GI1790505, Length=613, Percent_Identity=35.0734094616639, Blast_Score=355, Evalue=5e-99, Organism=Escherichia coli, GI1786529, Length=630, Percent_Identity=33.6507936507937, Blast_Score=291, Evalue=7e-80, Organism=Escherichia coli, GI1788107, Length=591, Percent_Identity=25.7191201353638, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI221142682, Length=506, Percent_Identity=24.1106719367589, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI145693145, Length=518, Percent_Identity=24.5173745173745, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1786810, Length=529, Percent_Identity=25.5198487712665, Blast_Score=98, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71982997, Length=633, Percent_Identity=31.4375987361769, Blast_Score=280, Evalue=1e-75, Organism=Caenorhabditis elegans, GI71983001, Length=633, Percent_Identity=31.4375987361769, Blast_Score=280, Evalue=1e-75, Organism=Caenorhabditis elegans, GI17569507, Length=625, Percent_Identity=25.92, Blast_Score=184, Evalue=9e-47, Organism=Caenorhabditis elegans, GI17557194, Length=568, Percent_Identity=25.1760563380282, Blast_Score=116, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17559526, Length=517, Percent_Identity=23.7911025145068, Blast_Score=108, Evalue=9e-24, Organism=Caenorhabditis elegans, GI17538037, Length=567, Percent_Identity=24.3386243386243, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71996755, Length=501, Percent_Identity=23.3532934131737, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17560308, Length=541, Percent_Identity=27.1719038817006, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17531443, Length=376, Percent_Identity=25.531914893617, Blast_Score=93, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17558820, Length=501, Percent_Identity=22.5548902195609, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71985884, Length=398, Percent_Identity=23.6180904522613, Blast_Score=86, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6323182, Length=624, Percent_Identity=33.3333333333333, Blast_Score=339, Evalue=7e-94, Organism=Saccharomyces cerevisiae, GI6319264, Length=631, Percent_Identity=33.4389857369255, Blast_Score=332, Evalue=1e-91, Organism=Saccharomyces cerevisiae, GI6319699, Length=390, Percent_Identity=24.3589743589744, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI24667955, Length=636, Percent_Identity=33.1761006289308, Blast_Score=339, Evalue=3e-93, Organism=Drosophila melanogaster, GI62472339, Length=540, Percent_Identity=34.4444444444444, Blast_Score=306, Evalue=2e-83, Organism=Drosophila melanogaster, GI24667959, Length=509, Percent_Identity=33.7917485265226, Blast_Score=279, Evalue=5e-75, Organism=Drosophila melanogaster, GI21355225, Length=602, Percent_Identity=27.2425249169435, Blast_Score=208, Evalue=8e-54, Organism=Drosophila melanogaster, GI18859661, Length=553, Percent_Identity=23.869801084991, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI21355181, Length=543, Percent_Identity=23.3885819521179, Blast_Score=108, Evalue=9e-24, Organism=Drosophila melanogaster, GI24648260, Length=515, Percent_Identity=23.495145631068, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI21356947, Length=506, Percent_Identity=24.901185770751, Blast_Score=91, Evalue=3e-18, Organism=Drosophila melanogaster, GI24648257, Length=360, Percent_Identity=25.2777777777778, Blast_Score=91, Evalue=3e-18, Organism=Drosophila melanogaster, GI24656500, Length=517, Percent_Identity=23.5976789168279, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI19922652, Length=572, Percent_Identity=22.5524475524476, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI281365686, Length=494, Percent_Identity=21.6599190283401, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI24653035, Length=532, Percent_Identity=21.8045112781955, Blast_Score=78, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.1 [H]
Molecular weight: Translated: 67868; Mature: 67868
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGKMIWTPTREFVETTNVWRLMKRLGFDDREEFLRFSRENPERFWGEMMREMRVEWFTP CCCCEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC YSKELDLSGGPEWARWFIGGRLNIAHNCLDRWADSDCAACIWEGESGAGGTLTFRELREQ CCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEHHHHHHH ANRTANGLRALGLEAGDRVALCLPMTPEILPILYGCFKAGLTVVPIFAGFGTGAIATRLI HHHHHHHHHEECCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHH DSGACVLFTAEFLERRGKRIPLAAKMPEFAGRTIVLGSEWQEFLASQPAEFATESLEAEA CCCCEEEEEHHHHHHCCCCCCCCCCCHHHCCCEEEECCHHHHHHHCCCHHHHHHHHCCCC RAFILYTSGTTGKPKGTVHTHAGSLAQMGKEIWLGFDHREGERFFWLSDIGWMMGPWTIL EEEEEEECCCCCCCCCCEEECCCHHHHCCHHHEEECCCCCCCEEEEECCCCHHHCCHHHH GNHLFGGTIFLYDGAPDYPGPMRLWETIDRHRITTFGVSPTAIRVLRKSPGELPAMESLR CCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCCCCHHHHHH LLGSTGEPWDDASWLWFFERVGRRRCPIINISGGTEIVGSFLFPLPIQALKPSSLGGPAP HHCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCHHHCCCCCCCCCCC GMSTEVVDESGVPVRGRKGYLVCTRPAPSMTRGIWGDPERYIETYWSKFPGMWYHGDWAS CCCCHHCCCCCCCCCCCCCEEEECCCCCHHHCCCCCCHHHHHHHHHHHCCCCEECCCCCC VDEDGHWFLHGRADESMNVAGRKVGPAEVEEAMMQHPDVAEAAVIGVPDELKGETIVGFA CCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCHHHEEEECCCHHHCCCEEEEEE VAKAGTVLDAAAVVRTVVEVLGPTFRPREIVVVTELPKTQSGKIVRRLIRQKYLGEELGD HHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH LSTVANPWAL HHHCCCCCCC >Mature Secondary Structure MDGKMIWTPTREFVETTNVWRLMKRLGFDDREEFLRFSRENPERFWGEMMREMRVEWFTP CCCCEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC YSKELDLSGGPEWARWFIGGRLNIAHNCLDRWADSDCAACIWEGESGAGGTLTFRELREQ CCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEHHHHHHH ANRTANGLRALGLEAGDRVALCLPMTPEILPILYGCFKAGLTVVPIFAGFGTGAIATRLI HHHHHHHHHEECCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHH DSGACVLFTAEFLERRGKRIPLAAKMPEFAGRTIVLGSEWQEFLASQPAEFATESLEAEA CCCCEEEEEHHHHHHCCCCCCCCCCCHHHCCCEEEECCHHHHHHHCCCHHHHHHHHCCCC RAFILYTSGTTGKPKGTVHTHAGSLAQMGKEIWLGFDHREGERFFWLSDIGWMMGPWTIL EEEEEEECCCCCCCCCCEEECCCHHHHCCHHHEEECCCCCCCEEEEECCCCHHHCCHHHH GNHLFGGTIFLYDGAPDYPGPMRLWETIDRHRITTFGVSPTAIRVLRKSPGELPAMESLR CCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCCCCHHHHHH LLGSTGEPWDDASWLWFFERVGRRRCPIINISGGTEIVGSFLFPLPIQALKPSSLGGPAP HHCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCHHHCCCCCCCCCCC GMSTEVVDESGVPVRGRKGYLVCTRPAPSMTRGIWGDPERYIETYWSKFPGMWYHGDWAS CCCCHHCCCCCCCCCCCCCEEEECCCCCHHHCCCCCCHHHHHHHHHHHCCCCEECCCCCC VDEDGHWFLHGRADESMNVAGRKVGPAEVEEAMMQHPDVAEAAVIGVPDELKGETIVGFA CCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCHHHEEEECCCHHHCCCEEEEEE VAKAGTVLDAAAVVRTVVEVLGPTFRPREIVVVTELPKTQSGKIVRRLIRQKYLGEELGD HHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH LSTVANPWAL HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA