| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is resE [H]
Identifier: 116626863
GI number: 116626863
Start: 9827770
End: 9830238
Strand: Direct
Name: resE [H]
Synonym: Acid_7838
Alternate gene names: 116626863
Gene position: 9827770-9830238 (Clockwise)
Preceding gene: 116626858
Following gene: 116626864
Centisome position: 98.62
GC content: 63.79
Gene sequence:
>2469_bases ATGTTGACCAGCCGAGCCAGAGCCGCAAAGATCGGATGGAGCCTTGCGATTCTGCTGGTCTCCGCGAGCGCCGGAATTCT GGTGGACTGGCAGATGTCGGGCGTGAGCCGCTACAGCCGCGACTGGCTGATGCGGTTGCGCGGGCCGCTGCCGGTGCCGG AAGATATCGCGATCGTAGCGATCGATGAAGCCAGCATAGCTCGCTTCGGGCGCTTCCCGTGGTCGCGGCAGGTGATCGCG CGTACGATCGATGCGCTGGCGGCCGCACATCCTAAGGTGATCGCGGTGGACGTGCTGTTCGCGGACCCGACCACACAGGA AGACGATGACAACCTGGCGCATTCAATCGGGCGCGCGGGCAACGTGGTGGTGGCGGCGCAGTTGAGCGATTCGCCGGTAC ACGGCGGGCCATCGCGCTGGCTGGCTCCGCTGCCGGTGATCGAACATGCGGCCAAGGCGGTCGGCCACGTCAACGTGCAG ACGGAACTTGAGGGCGTGGCGCGGCAGATCGCGGAGCGACTGGCGGACGATTCCGGCCGTTCGTACCGGGCGCTGGCGAT GGAAGCAGTGCGCGTGGCCGATGGGACCAGCGAGGAGGGCGTTACGGATGCGCCGCACGCGCTGCTGCTGGGATCGCGCA CGATTCCGCTGGATACAACGGCGCCTTCGACGGTCATCGAGCCGACCGAATCCACGCGTGTGTTGCGCGGCGGGCGTATG TCGATCGATTACATCGGGCCGGCGGGGTCCTTCAACCCGGTGACGTACAGCTTGGCCGATGTGGTGGCGGGACGCGTGCC GCCGGAGAAGTTTCGCGGCAAGTTTGTGCTGATCGGCGCCACCGCTGCGTCATTGGGCGACCGGATTACGTCGCCATTCG TGCGGTACACGGATGCGCGCGCCGATCAACATGGGGCGCTGATGCCGGGCGTGGAAGTGCTGGCTAACTCGATCAACGTG ATTCTAAGCGGACGCTATTATTCCGTGACCTCCGATATGACGGCGTTTCTCTTAGCGGCGCTGGTGGCAGCGCTCACGCT TATGCTGCTGGAAGCCGCGCAAGGCGGACACGAACTTTTGAAACAACTCGGCGTGCTGATCGGGATGGCGGGGTTGATTG TCGCGGTGGGCTACCTGGCATTTCTGAAGCTGCTGGTGTTTCCGCCGATTGTGCCTTGTCTGGTGGCCTTCATGTGCGCC GGTGTTCTGGGGCTGCTGCAACGCTCGATGACAGCGAGCGCGCGGCTGGATCAGAATATCGCCGAGCTTGCGTTGTCGGG CGACCTGCTGGCGCCGGCGGGGCCCGGCATTCCGGGACCGTACCACTGGGCGGAAGGGGGTCCGGTTTCACTTTCGCGCG GATGGCTGCCGAAGGGGCTGGAATGGAAGGCGCGGATGCTGAGCGAACTGAACGGCCGGTTGCTGGATCGCGCAAAATTC GTCAACTTCGCGCTGCGCTCGATCGAAGACGGGCTGGTGATCGCGGATCCGGATGGAAGGATCACGTTCGCAAATCGCAG CGCGGGCGCGATACTCGGGGCGACGGCGCGCGGTCTGGTGGGCCAAAGCCTGGCGCAGCGCTTGAACGGCTCAGTGAACG CCGAGGTGCTGGCGCGGCTGGTGGCGGAGCGCGGCCACATCGAGCACGAGATTACGATCCGGGGCTCACGCATGCGGCAG TACACGCTGCGGCTGGCGACGGTTTCCGCCGATGATAGCGGCGACGGGCCGGTACTCGGAATCGTAGGCTCCCTTTCTGA CGTGACCCGGCAGCATGAACTACAGCAGACTAAAAATGATGTGATCTCGCTGGTGTCGCATGAGATGCGCACGCCGCTCA CGGCGATTCAGGGCATGACGGAACTACTGGCGGCATACGACGTGGAACCATCGCGGCGCCGCGAAATGAATCTGGCCATC AACGACGAAGTGAAGCGGCTGGCGCGCATGATCACGGAATATCTGGACATCACGCGACTGGAGAGCGGCGCGACGCAGAT GCGCATGGCGGCAGTACGGGTGGAGAGCATTCTGGAGCGCATTTTGATTTTGATCGAGCCGATTGCGGCGCAGCGCCAGA TTCAATTGGTACGGCAGATCCCAGCGGACCTGCCGGCGGTGCTGGCCGACCCCGACCTGTTCTCACGGGCAGTGGAGAAT CTGGTTACCAACGCCGTGAAATACAGTCCCAACGGCACGACCGTGACGGTCTCCGCGCGCGCCGAAGAAGATTGCCTGTG GATCGATGTGGCAGACCAGGGATACGGAATTCCGGAGACCGACCTGAGCCGCATCTTCGAAAAGTTTTATCGCGTACCCC GCGTGCAGGATGCCGGAGTTCCCGGTACCGGCCTCGGCCTCTCGCTGGTGCGCGAAATCGCGGAACTTCATCACGGCTCG GTTGCGGTAAGGAGCGAAGTCGGGAAGGGTTCCACATTTACCCTGCGGATTCCCCGCTCGGAGGCTTAA
Upstream 100 bases:
>100_bases CTGGTTTTATGCTGAATACAAATGGGTTATGGGTACACATTCGTGGTACACAACGTGCGAATACGGCCAGTGAGCCGGAG AGTAAGCTGAAAGTACCTTA
Downstream 100 bases:
>100_bases TTCTTATGATGTCGCAGCAACCACCACATATTCTGATCGCAGACGATGAACGCTCGATCCGGCTGATGCTGGAGACAGGT CTTACTCTGAATGGATTTCG
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 822; Mature: 822
Protein sequence:
>822_residues MLTSRARAAKIGWSLAILLVSASAGILVDWQMSGVSRYSRDWLMRLRGPLPVPEDIAIVAIDEASIARFGRFPWSRQVIA RTIDALAAAHPKVIAVDVLFADPTTQEDDDNLAHSIGRAGNVVVAAQLSDSPVHGGPSRWLAPLPVIEHAAKAVGHVNVQ TELEGVARQIAERLADDSGRSYRALAMEAVRVADGTSEEGVTDAPHALLLGSRTIPLDTTAPSTVIEPTESTRVLRGGRM SIDYIGPAGSFNPVTYSLADVVAGRVPPEKFRGKFVLIGATAASLGDRITSPFVRYTDARADQHGALMPGVEVLANSINV ILSGRYYSVTSDMTAFLLAALVAALTLMLLEAAQGGHELLKQLGVLIGMAGLIVAVGYLAFLKLLVFPPIVPCLVAFMCA GVLGLLQRSMTASARLDQNIAELALSGDLLAPAGPGIPGPYHWAEGGPVSLSRGWLPKGLEWKARMLSELNGRLLDRAKF VNFALRSIEDGLVIADPDGRITFANRSAGAILGATARGLVGQSLAQRLNGSVNAEVLARLVAERGHIEHEITIRGSRMRQ YTLRLATVSADDSGDGPVLGIVGSLSDVTRQHELQQTKNDVISLVSHEMRTPLTAIQGMTELLAAYDVEPSRRREMNLAI NDEVKRLARMITEYLDITRLESGATQMRMAAVRVESILERILILIEPIAAQRQIQLVRQIPADLPAVLADPDLFSRAVEN LVTNAVKYSPNGTTVTVSARAEEDCLWIDVADQGYGIPETDLSRIFEKFYRVPRVQDAGVPGTGLGLSLVREIAELHHGS VAVRSEVGKGSTFTLRIPRSEA
Sequences:
>Translated_822_residues MLTSRARAAKIGWSLAILLVSASAGILVDWQMSGVSRYSRDWLMRLRGPLPVPEDIAIVAIDEASIARFGRFPWSRQVIA RTIDALAAAHPKVIAVDVLFADPTTQEDDDNLAHSIGRAGNVVVAAQLSDSPVHGGPSRWLAPLPVIEHAAKAVGHVNVQ TELEGVARQIAERLADDSGRSYRALAMEAVRVADGTSEEGVTDAPHALLLGSRTIPLDTTAPSTVIEPTESTRVLRGGRM SIDYIGPAGSFNPVTYSLADVVAGRVPPEKFRGKFVLIGATAASLGDRITSPFVRYTDARADQHGALMPGVEVLANSINV ILSGRYYSVTSDMTAFLLAALVAALTLMLLEAAQGGHELLKQLGVLIGMAGLIVAVGYLAFLKLLVFPPIVPCLVAFMCA GVLGLLQRSMTASARLDQNIAELALSGDLLAPAGPGIPGPYHWAEGGPVSLSRGWLPKGLEWKARMLSELNGRLLDRAKF VNFALRSIEDGLVIADPDGRITFANRSAGAILGATARGLVGQSLAQRLNGSVNAEVLARLVAERGHIEHEITIRGSRMRQ YTLRLATVSADDSGDGPVLGIVGSLSDVTRQHELQQTKNDVISLVSHEMRTPLTAIQGMTELLAAYDVEPSRRREMNLAI NDEVKRLARMITEYLDITRLESGATQMRMAAVRVESILERILILIEPIAAQRQIQLVRQIPADLPAVLADPDLFSRAVEN LVTNAVKYSPNGTTVTVSARAEEDCLWIDVADQGYGIPETDLSRIFEKFYRVPRVQDAGVPGTGLGLSLVREIAELHHGS VAVRSEVGKGSTFTLRIPRSEA >Mature_822_residues MLTSRARAAKIGWSLAILLVSASAGILVDWQMSGVSRYSRDWLMRLRGPLPVPEDIAIVAIDEASIARFGRFPWSRQVIA RTIDALAAAHPKVIAVDVLFADPTTQEDDDNLAHSIGRAGNVVVAAQLSDSPVHGGPSRWLAPLPVIEHAAKAVGHVNVQ TELEGVARQIAERLADDSGRSYRALAMEAVRVADGTSEEGVTDAPHALLLGSRTIPLDTTAPSTVIEPTESTRVLRGGRM SIDYIGPAGSFNPVTYSLADVVAGRVPPEKFRGKFVLIGATAASLGDRITSPFVRYTDARADQHGALMPGVEVLANSINV ILSGRYYSVTSDMTAFLLAALVAALTLMLLEAAQGGHELLKQLGVLIGMAGLIVAVGYLAFLKLLVFPPIVPCLVAFMCA GVLGLLQRSMTASARLDQNIAELALSGDLLAPAGPGIPGPYHWAEGGPVSLSRGWLPKGLEWKARMLSELNGRLLDRAKF VNFALRSIEDGLVIADPDGRITFANRSAGAILGATARGLVGQSLAQRLNGSVNAEVLARLVAERGHIEHEITIRGSRMRQ YTLRLATVSADDSGDGPVLGIVGSLSDVTRQHELQQTKNDVISLVSHEMRTPLTAIQGMTELLAAYDVEPSRRREMNLAI NDEVKRLARMITEYLDITRLESGATQMRMAAVRVESILERILILIEPIAAQRQIQLVRQIPADLPAVLADPDLFSRAVEN LVTNAVKYSPNGTTVTVSARAEEDCLWIDVADQGYGIPETDLSRIFEKFYRVPRVQDAGVPGTGLGLSLVREIAELHHGS VAVRSEVGKGSTFTLRIPRSEA
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI145693157, Length=224, Percent_Identity=32.5892857142857, Blast_Score=121, Evalue=2e-28, Organism=Escherichia coli, GI1786600, Length=232, Percent_Identity=30.1724137931034, Blast_Score=119, Evalue=6e-28, Organism=Escherichia coli, GI1788549, Length=439, Percent_Identity=26.6514806378132, Blast_Score=114, Evalue=4e-26, Organism=Escherichia coli, GI1786912, Length=233, Percent_Identity=30.9012875536481, Blast_Score=113, Evalue=5e-26, Organism=Escherichia coli, GI1789149, Length=237, Percent_Identity=30.379746835443, Blast_Score=112, Evalue=8e-26, Organism=Escherichia coli, GI1790436, Length=214, Percent_Identity=31.7757009345794, Blast_Score=109, Evalue=6e-25, Organism=Escherichia coli, GI48994928, Length=376, Percent_Identity=28.1914893617021, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI1790861, Length=248, Percent_Identity=29.4354838709677, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI1786783, Length=215, Percent_Identity=27.906976744186, Blast_Score=99, Evalue=1e-21, Organism=Escherichia coli, GI1789403, Length=222, Percent_Identity=32.8828828828829, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI87081816, Length=226, Percent_Identity=30.0884955752212, Blast_Score=93, Evalue=9e-20, Organism=Escherichia coli, GI1788393, Length=224, Percent_Identity=27.2321428571429, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1788713, Length=230, Percent_Identity=26.9565217391304, Blast_Score=90, Evalue=7e-19, Organism=Escherichia coli, GI87082128, Length=235, Percent_Identity=25.9574468085106, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1788279, Length=216, Percent_Identity=25.462962962963, Blast_Score=84, Evalue=5e-17, Organism=Escherichia coli, GI1790346, Length=214, Percent_Identity=30.3738317757009, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1790300, Length=355, Percent_Identity=25.9154929577465, Blast_Score=80, Evalue=5e-16, Organism=Escherichia coli, GI1790551, Length=209, Percent_Identity=29.1866028708134, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1789808, Length=199, Percent_Identity=30.1507537688442, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI1787894, Length=222, Percent_Identity=25.6756756756757, Blast_Score=70, Evalue=6e-13, Organism=Escherichia coli, GI1787374, Length=202, Percent_Identity=26.2376237623762, Blast_Score=63, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 88232; Mature: 88232
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: PS50112 PAS ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSRARAAKIGWSLAILLVSASAGILVDWQMSGVSRYSRDWLMRLRGPLPVPEDIAIVA CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEE IDEASIARFGRFPWSRQVIARTIDALAAAHPKVIAVDVLFADPTTQEDDDNLAHSIGRAG ECCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHCCCC NVVVAAQLSDSPVHGGPSRWLAPLPVIEHAAKAVGHVNVQTELEGVARQIAERLADDSGR CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC SYRALAMEAVRVADGTSEEGVTDAPHALLLGSRTIPLDTTAPSTVIEPTESTRVLRGGRM CHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEECCCCCCHHHCCCCE SIDYIGPAGSFNPVTYSLADVVAGRVPPEKFRGKFVLIGATAASLGDRITSPFVRYTDAR EEEEECCCCCCCCHHHHHHHHHHCCCCHHHHCCCEEEEECCHHHHHHHHCCCHHHHHHCC ADQHGALMPGVEVLANSINVILSGRYYSVTSDMTAFLLAALVAALTLMLLEAAQGGHELL CCCCCCCCCCHHHHHCCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH KQLGVLIGMAGLIVAVGYLAFLKLLVFPPIVPCLVAFMCAGVLGLLQRSMTASARLDQNI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AELALSGDLLAPAGPGIPGPYHWAEGGPVSLSRGWLPKGLEWKARMLSELNGRLLDRAKF HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VNFALRSIEDGLVIADPDGRITFANRSAGAILGATARGLVGQSLAQRLNGSVNAEVLARL HHHHHHHCCCCEEEECCCCCEEEECCCCCEEECHHHHHHHHHHHHHHHCCCCCHHHHHHH VAERGHIEHEITIRGSRMRQYTLRLATVSADDSGDGPVLGIVGSLSDVTRQHELQQTKND HHHCCCCCEEEEEECCHHEEEEEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHH VISLVSHEMRTPLTAIQGMTELLAAYDVEPSRRREMNLAINDEVKRLARMITEYLDITRL HHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHCCCEECHHHHHHHHHHHHHHHHHHH ESGATQMRMAAVRVESILERILILIEPIAAQRQIQLVRQIPADLPAVLADPDLFSRAVEN CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHH LVTNAVKYSPNGTTVTVSARAEEDCLWIDVADQGYGIPETDLSRIFEKFYRVPRVQDAGV HHHHHEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCC PGTGLGLSLVREIAELHHGSVAVRSEVGKGSTFTLRIPRSEA CCCCHHHHHHHHHHHHCCCCEEEEHHCCCCCEEEEECCCCCC >Mature Secondary Structure MLTSRARAAKIGWSLAILLVSASAGILVDWQMSGVSRYSRDWLMRLRGPLPVPEDIAIVA CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEE IDEASIARFGRFPWSRQVIARTIDALAAAHPKVIAVDVLFADPTTQEDDDNLAHSIGRAG ECCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHCCCC NVVVAAQLSDSPVHGGPSRWLAPLPVIEHAAKAVGHVNVQTELEGVARQIAERLADDSGR CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC SYRALAMEAVRVADGTSEEGVTDAPHALLLGSRTIPLDTTAPSTVIEPTESTRVLRGGRM CHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEECCCCCCHHHCCCCE SIDYIGPAGSFNPVTYSLADVVAGRVPPEKFRGKFVLIGATAASLGDRITSPFVRYTDAR EEEEECCCCCCCCHHHHHHHHHHCCCCHHHHCCCEEEEECCHHHHHHHHCCCHHHHHHCC ADQHGALMPGVEVLANSINVILSGRYYSVTSDMTAFLLAALVAALTLMLLEAAQGGHELL CCCCCCCCCCHHHHHCCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH KQLGVLIGMAGLIVAVGYLAFLKLLVFPPIVPCLVAFMCAGVLGLLQRSMTASARLDQNI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AELALSGDLLAPAGPGIPGPYHWAEGGPVSLSRGWLPKGLEWKARMLSELNGRLLDRAKF HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VNFALRSIEDGLVIADPDGRITFANRSAGAILGATARGLVGQSLAQRLNGSVNAEVLARL HHHHHHHCCCCEEEECCCCCEEEECCCCCEEECHHHHHHHHHHHHHHHCCCCCHHHHHHH VAERGHIEHEITIRGSRMRQYTLRLATVSADDSGDGPVLGIVGSLSDVTRQHELQQTKND HHHCCCCCEEEEEECCHHEEEEEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHH VISLVSHEMRTPLTAIQGMTELLAAYDVEPSRRREMNLAINDEVKRLARMITEYLDITRL HHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHCCCEECHHHHHHHHHHHHHHHHHHH ESGATQMRMAAVRVESILERILILIEPIAAQRQIQLVRQIPADLPAVLADPDLFSRAVEN CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHH LVTNAVKYSPNGTTVTVSARAEEDCLWIDVADQGYGIPETDLSRIFEKFYRVPRVQDAGV HHHHHEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCC PGTGLGLSLVREIAELHHGSVAVRSEVGKGSTFTLRIPRSEA CCCCHHHHHHHHHHHHCCCCEEEEHHCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]