| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is ctaE [H]
Identifier: 116626619
GI number: 116626619
Start: 9508267
End: 9508863
Strand: Direct
Name: ctaE [H]
Synonym: Acid_7582
Alternate gene names: 116626619
Gene position: 9508267-9508863 (Clockwise)
Preceding gene: 116626618
Following gene: 116626620
Centisome position: 95.41
GC content: 55.44
Gene sequence:
>597_bases ATGAGCGCCACTCCAATGACCATCCCCGGCACGGAACCGCCATGGGAACTTCCCTCGCGAGGGCGGGTGGGAATGCTCTC GCTCATCGCAGCCGAGTCCGCGATCTTCATTATTTTCGTCGTCGCGTACCTCTACTATTCCGGCAAGAGCCTCACGGGGC CCACGCCGAATGAAGTTCTGCGGATTCCTGTGTTTTATACGCTTTGCCTGCTTTCAAGCAGTCTGACGATTCACTTCGCA ATTCGAGGGGTCCGGCACGGCAACATCGGAACCTTCAGCAGCTGGTGGTTTGTGACAGTTGCGCTGGGGACCGCTTTTCT TTACGGCACAGCGCGCGAATGGTACCGCCTGATTTTCGAAGACGGGCTGACTATCCGTACGAACCTGTTTGGTACAACTT ACTATTCCTTAGTCGGCTTACATGGCTTCCACGTAGTGATAGGCCTGATCTTACTTTCCACCGTTTGGATATTCACGGCA TTGGGACACGTCGGACAGGAGCACGCCTACCGCCTTGACGTGTTGTCCCTCTACTGGCATTTCGTGGACGCGGTGTGGGT GGTCGTCTTCACCGTGGTTTACGTGATTGGGAGATGA
Upstream 100 bases:
>100_bases AACTTCGCGCTGATTCCCTCGGTCAGAAGCCGCCGTCCGCTCTGGGATCTCAAGCACCCGGAGGATCCGGACTGGCGGTA TGAGCAGTGAGGATAGGGCA
Downstream 100 bases:
>100_bases GAGGGCCTGGAACATGATCCTGGAACCACCGGCAAAGAGGCTCGACGAAGCACCAAATACCGTGGAAATGGCTTCGCCGA CCGCGTGGCCGGTCGTCCTC
Product: cytochrome c oxidase subunit III
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MSATPMTIPGTEPPWELPSRGRVGMLSLIAAESAIFIIFVVAYLYYSGKSLTGPTPNEVLRIPVFYTLCLLSSSLTIHFA IRGVRHGNIGTFSSWWFVTVALGTAFLYGTAREWYRLIFEDGLTIRTNLFGTTYYSLVGLHGFHVVIGLILLSTVWIFTA LGHVGQEHAYRLDVLSLYWHFVDAVWVVVFTVVYVIGR
Sequences:
>Translated_198_residues MSATPMTIPGTEPPWELPSRGRVGMLSLIAAESAIFIIFVVAYLYYSGKSLTGPTPNEVLRIPVFYTLCLLSSSLTIHFA IRGVRHGNIGTFSSWWFVTVALGTAFLYGTAREWYRLIFEDGLTIRTNLFGTTYYSLVGLHGFHVVIGLILLSTVWIFTA LGHVGQEHAYRLDVLSLYWHFVDAVWVVVFTVVYVIGR >Mature_197_residues SATPMTIPGTEPPWELPSRGRVGMLSLIAAESAIFIIFVVAYLYYSGKSLTGPTPNEVLRIPVFYTLCLLSSSLTIHFAI RGVRHGNIGTFSSWWFVTVALGTAFLYGTAREWYRLIFEDGLTIRTNLFGTTYYSLVGLHGFHVVIGLILLSTVWIFTAL GHVGQEHAYRLDVLSLYWHFVDAVWVVVFTVVYVIGR
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=143, Percent_Identity=31.4685314685315, Blast_Score=78, Evalue=5e-15, Organism=Escherichia coli, GI1786633, Length=171, Percent_Identity=30.9941520467836, Blast_Score=78, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 22186; Mature: 22055
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATPMTIPGTEPPWELPSRGRVGMLSLIAAESAIFIIFVVAYLYYSGKSLTGPTPNEVL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHE RIPVFYTLCLLSSSLTIHFAIRGVRHGNIGTFSSWWFVTVALGTAFLYGTAREWYRLIFE EHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGLTIRTNLFGTTYYSLVGLHGFHVVIGLILLSTVWIFTALGHVGQEHAYRLDVLSLYWH CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH FVDAVWVVVFTVVYVIGR HHHHHHHHHHHHHHHHCC >Mature Secondary Structure SATPMTIPGTEPPWELPSRGRVGMLSLIAAESAIFIIFVVAYLYYSGKSLTGPTPNEVL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHE RIPVFYTLCLLSSSLTIHFAIRGVRHGNIGTFSSWWFVTVALGTAFLYGTAREWYRLIFE EHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGLTIRTNLFGTTYYSLVGLHGFHVVIGLILLSTVWIFTALGHVGQEHAYRLDVLSLYWH CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH FVDAVWVVVFTVVYVIGR HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8387368; 8905231 [H]