| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is yedZ [H]
Identifier: 116626574
GI number: 116626574
Start: 9445167
End: 9445793
Strand: Direct
Name: yedZ [H]
Synonym: Acid_7537
Alternate gene names: 116626574
Gene position: 9445167-9445793 (Clockwise)
Preceding gene: 116626573
Following gene: 116626575
Centisome position: 94.78
GC content: 59.49
Gene sequence:
>627_bases ATGTTGAGACAACGCTGGACCAAGGCAGTGGTGTTCCTCGCCGGCCTGCTGCCGCTCTTTTGGGTGGGATGGCGGGCCTG GCAGCAGAACCTGACCGCCAACCCGATCGAGTACATCACGCACTTCACGGGCGATTGGACGATCCGCTTTCTGGTGTTCA CCCTGGCGGTGACGCCGTTGCGAAAGCTGCTTGGCGCGCCGGATCTGATCCGGTTCCGCAGGATGATCGGACTCTACGCG TTCTTCTATGGAACGCTTCACTTCATCACTTACATCTGGCTGGACAAGTTTTTCGATCTCTCGGAAATGTTGAAGGACGT AGCGAAACGGCCGTATATCACAGCCGGTTTCACGGCGTTCGTCCTGATGATCCCTCTGGCGGTAACCTCGACCGCTGGAT GGATTCGAAGAATCGGCGGCAAGCGCTGGCAGCTGCTGCACCGGCTGGTCTACTTGAGCGCGATCGCCGGCGTGATCCAC TATTATTGGCTGGTGAAGAGCGATATCCGGCTGCCGGCGATGTACGGCGCCTTCGTGGCAGTGTTACTGGGCTACCGCGC GATCGTGTGGGCAATGAATCGCCGCCCGCGCGCCGCGTCAAGACACCCAGTGGGTATTACGTCGTGA
Upstream 100 bases:
>100_bases GGCGAGTTCCGTATGCGCCCCACGCTGATGTTCAACGGCTATGGCGATCAGGTGGCCAGCCTCTACAACGGCATGGACCT GAAGAAATACTACTAAGCCG
Downstream 100 bases:
>100_bases AATTCTCGACACAATCGTATTCACTAACACACTGCACGAGTACCGGTCAGTCTTCGGATTAAGCCAAAAGTTCTAGAACG GAAAGGGTAATCTGGGCCTT
Product: ferric reductase domain-containing protein
Products: NA
Alternate protein names: Flavocytochrome yedZ [H]
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MLRQRWTKAVVFLAGLLPLFWVGWRAWQQNLTANPIEYITHFTGDWTIRFLVFTLAVTPLRKLLGAPDLIRFRRMIGLYA FFYGTLHFITYIWLDKFFDLSEMLKDVAKRPYITAGFTAFVLMIPLAVTSTAGWIRRIGGKRWQLLHRLVYLSAIAGVIH YYWLVKSDIRLPAMYGAFVAVLLGYRAIVWAMNRRPRAASRHPVGITS
Sequences:
>Translated_208_residues MLRQRWTKAVVFLAGLLPLFWVGWRAWQQNLTANPIEYITHFTGDWTIRFLVFTLAVTPLRKLLGAPDLIRFRRMIGLYA FFYGTLHFITYIWLDKFFDLSEMLKDVAKRPYITAGFTAFVLMIPLAVTSTAGWIRRIGGKRWQLLHRLVYLSAIAGVIH YYWLVKSDIRLPAMYGAFVAVLLGYRAIVWAMNRRPRAASRHPVGITS >Mature_208_residues MLRQRWTKAVVFLAGLLPLFWVGWRAWQQNLTANPIEYITHFTGDWTIRFLVFTLAVTPLRKLLGAPDLIRFRRMIGLYA FFYGTLHFITYIWLDKFFDLSEMLKDVAKRPYITAGFTAFVLMIPLAVTSTAGWIRRIGGKRWQLLHRLVYLSAIAGVIH YYWLVKSDIRLPAMYGAFVAVLLGYRAIVWAMNRRPRAASRHPVGITS
Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY [H]
COG id: COG2717
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yedZ family [H]
Homologues:
Organism=Escherichia coli, GI1788283, Length=171, Percent_Identity=42.1052631578947, Blast_Score=127, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013130 - InterPro: IPR022837 [H]
Pfam domain/function: PF01794 Ferric_reduct [H]
EC number: NA
Molecular weight: Translated: 24170; Mature: 24170
Theoretical pI: Translated: 11.47; Mature: 11.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRQRWTKAVVFLAGLLPLFWVGWRAWQQNLTANPIEYITHFTGDWTIRFLVFTLAVTPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH RKLLGAPDLIRFRRMIGLYAFFYGTLHFITYIWLDKFFDLSEMLKDVAKRPYITAGFTAF HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHH VLMIPLAVTSTAGWIRRIGGKRWQLLHRLVYLSAIAGVIHYYWLVKSDIRLPAMYGAFVA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VLLGYRAIVWAMNRRPRAASRHPVGITS HHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MLRQRWTKAVVFLAGLLPLFWVGWRAWQQNLTANPIEYITHFTGDWTIRFLVFTLAVTPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH RKLLGAPDLIRFRRMIGLYAFFYGTLHFITYIWLDKFFDLSEMLKDVAKRPYITAGFTAF HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHH VLMIPLAVTSTAGWIRRIGGKRWQLLHRLVYLSAIAGVIHYYWLVKSDIRLPAMYGAFVA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VLLGYRAIVWAMNRRPRAASRHPVGITS HHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Mo [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA