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The map label for this gene is yedY [H]

Identifier: 116626573

GI number: 116626573

Start: 9444242

End: 9445162

Strand: Direct

Name: yedY [H]

Synonym: Acid_7536

Alternate gene names: 116626573

Gene position: 9444242-9445162 (Clockwise)

Preceding gene: 116626572

Following gene: 116626574

Centisome position: 94.77

GC content: 58.96

Gene sequence:

>921_bases
ATGCTGATCAAGAAACCTGCCGATATCCCGTATTCGGAGGTTACGCCGAAGCATATCTATTTGAACCGGAGGAAGTTCCT
GGCCGCGATTCCGGCGGCCATCCTGGGGACGCGCGCCTTGAAGGCCGGCACCAAACTGCCGAACGTCGCCAGGAACGGTA
AGTACTCGGTGGACGACAAGGTCAATTCCTTCCAGGACGTCTCCACTTATAACAACTATTACGAATTCGGCACTGATAAG
GGTGAACCCTCTCAGTATGCGCGGAACTTCAAGACCGCCCCGTGGACGGTGAGCGTGGAGGGCGCCTGCGCCAAGCCTCG
CAAATTCAGCCTGGAAGAGATCATGGCGCTGGCTCCGTTGGAAGAGCGCATCTACCGGCACCGCTGCGTCGAACGCTGGT
CCATCGTGGTGCCGTGGATCGGGTATTCGTTGAGCACTCTCCTGAAGCAGGTGGAGCCGACCTCGAAGGCCACCTACGTG
GCATTTGAAACCTTCTTCGATCGCAAGCAGATGCCGCACGCCGCCGGGCTGCAGTTCCCTTATGTCGAAGGACTGCGCAT
GGATGAAGCCATGCATCCGCTGGCCCTGTTGACGGTGGGCATGTTCGGCGAAACGCTGCCGCCACAGGATGGCGCGCCGG
TGCGCATGATTCTGCCCTGGAAGTACGGCTTCAAGAGCATCAAATCGATCGTCAAGATCAAGCTCGTGGGCAGCATGCCG
CCGACCTCGTGGAACGTCGCAAACGCCGAAGAGTACGGCTTTTATTCCAACGTGAACCCGAAGGTGGATCATCCCCGCTG
GAGCCAGGCGCAGGAGCGCCGGCTCGGCGAGTTCCGTATGCGCCCCACGCTGATGTTCAACGGCTATGGCGATCAGGTGG
CCAGCCTCTACAACGGCATGGACCTGAAGAAATACTACTAA

Upstream 100 bases:

>100_bases
CAGGTCAAGCCCTCAATCCGGCGGCCGCGGGGAATCGTACTCTATTGCAGAGGGCGGGAATAAAGCGCCATCATAGTGGA
TATAGAGTTGGAGGGAAGAG

Downstream 100 bases:

>100_bases
GCCGATGTTGAGACAACGCTGGACCAAGGCAGTGGTGTTCCTCGCCGGCCTGCTGCCGCTCTTTTGGGTGGGATGGCGGG
CCTGGCAGCAGAACCTGACC

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MLIKKPADIPYSEVTPKHIYLNRRKFLAAIPAAILGTRALKAGTKLPNVARNGKYSVDDKVNSFQDVSTYNNYYEFGTDK
GEPSQYARNFKTAPWTVSVEGACAKPRKFSLEEIMALAPLEERIYRHRCVERWSIVVPWIGYSLSTLLKQVEPTSKATYV
AFETFFDRKQMPHAAGLQFPYVEGLRMDEAMHPLALLTVGMFGETLPPQDGAPVRMILPWKYGFKSIKSIVKIKLVGSMP
PTSWNVANAEEYGFYSNVNPKVDHPRWSQAQERRLGEFRMRPTLMFNGYGDQVASLYNGMDLKKYY

Sequences:

>Translated_306_residues
MLIKKPADIPYSEVTPKHIYLNRRKFLAAIPAAILGTRALKAGTKLPNVARNGKYSVDDKVNSFQDVSTYNNYYEFGTDK
GEPSQYARNFKTAPWTVSVEGACAKPRKFSLEEIMALAPLEERIYRHRCVERWSIVVPWIGYSLSTLLKQVEPTSKATYV
AFETFFDRKQMPHAAGLQFPYVEGLRMDEAMHPLALLTVGMFGETLPPQDGAPVRMILPWKYGFKSIKSIVKIKLVGSMP
PTSWNVANAEEYGFYSNVNPKVDHPRWSQAQERRLGEFRMRPTLMFNGYGDQVASLYNGMDLKKYY
>Mature_306_residues
MLIKKPADIPYSEVTPKHIYLNRRKFLAAIPAAILGTRALKAGTKLPNVARNGKYSVDDKVNSFQDVSTYNNYYEFGTDK
GEPSQYARNFKTAPWTVSVEGACAKPRKFSLEEIMALAPLEERIYRHRCVERWSIVVPWIGYSLSTLLKQVEPTSKATYV
AFETFFDRKQMPHAAGLQFPYVEGLRMDEAMHPLALLTVGMFGETLPPQDGAPVRMILPWKYGFKSIKSIVKIKLVGSMP
PTSWNVANAEEYGFYSNVNPKVDHPRWSQAQERRLGEFRMRPTLMFNGYGDQVASLYNGMDLKKYY

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=251, Percent_Identity=58.9641434262948, Blast_Score=313, Evalue=9e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 34902; Mature: 34902

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKKPADIPYSEVTPKHIYLNRRKFLAAIPAAILGTRALKAGTKLPNVARNGKYSVDDK
CCCCCCCCCCHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCHH
VNSFQDVSTYNNYYEFGTDKGEPSQYARNFKTAPWTVSVEGACAKPRKFSLEEIMALAPL
HHHHHHHHHHCCHHCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCH
EERIYRHRCVERWSIVVPWIGYSLSTLLKQVEPTSKATYVAFETFFDRKQMPHAAGLQFP
HHHHHHHHHHHHHEEEECHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCHHHCCCCC
YVEGLRMDEAMHPLALLTVGMFGETLPPQDGAPVRMILPWKYGFKSIKSIVKIKLVGSMP
HHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHEEEEECCCC
PTSWNVANAEEYGFYSNVNPKVDHPRWSQAQERRLGEFRMRPTLMFNGYGDQVASLYNGM
CCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCC
DLKKYY
CHHCCC
>Mature Secondary Structure
MLIKKPADIPYSEVTPKHIYLNRRKFLAAIPAAILGTRALKAGTKLPNVARNGKYSVDDK
CCCCCCCCCCHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCHH
VNSFQDVSTYNNYYEFGTDKGEPSQYARNFKTAPWTVSVEGACAKPRKFSLEEIMALAPL
HHHHHHHHHHCCHHCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCH
EERIYRHRCVERWSIVVPWIGYSLSTLLKQVEPTSKATYVAFETFFDRKQMPHAAGLQFP
HHHHHHHHHHHHHEEEECHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCHHHCCCCC
YVEGLRMDEAMHPLALLTVGMFGETLPPQDGAPVRMILPWKYGFKSIKSIVKIKLVGSMP
HHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHEEEEECCCC
PTSWNVANAEEYGFYSNVNPKVDHPRWSQAQERRLGEFRMRPTLMFNGYGDQVASLYNGM
CCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCC
DLKKYY
CHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14500782 [H]