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The map label for this gene is 116626509

Identifier: 116626509

GI number: 116626509

Start: 9364505

End: 9364852

Strand: Direct

Name: 116626509

Synonym: Acid_7472

Alternate gene names: NA

Gene position: 9364505-9364852 (Clockwise)

Preceding gene: 116626508

Following gene: 116626510

Centisome position: 93.97

GC content: 59.48

Gene sequence:

>348_bases
ATGGAACATTACACCTGGGACGCAATGGAAAAAGAGGTGCTGAGCGAGACCATCGCGCGCAAGATTATCTCCGGCGATAA
AGCGATGGTGGCGCAGGTCTTCCTCGCCAAAGGCGCGATTGTGCCGGAGCATCACCACGAGAGTGAGCAGATCACGTACA
TCCTGGAGGGCGCCCTGAAGTTCGAGATCGACGGCAAGGAGATTGTGGTCGGGAAGGGCCAGGTGCTGCGCATTCCCTCC
AACGTGCCGCATCGCGCGGTGGCCTTGGAGGACACGCTGGATCTGGACATCTTCAGCCCGATCCGCGAGGACTGGTTGAA
GAAGGACGACGCTTACCTGCGAGGCTGA

Upstream 100 bases:

>100_bases
CCGCCTTCCGGCAGGGCGCGGCCAGCGCGCCGCCCGGAATGCTGCGTTACCTGAATCAATCCGCCCTACGTACCTTGGCA
AAATAAGGAGCAGGAACCGA

Downstream 100 bases:

>100_bases
GCGCGATGGATCTTGGATTGAAGGGCCGCGTGGCGATTGTCGCCGCGTCCAGCCAGGGCCTGGGTAAGGCCGTGGCGATG
GGACTCGCCCGGGAAGGAGC

Product: cupin 2 domain-containing protein

Products: NA

Alternate protein names: Pectin Degradation Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Pectin Degradation Protein KdgF; Cupin 2 Conserved Barrel Domain Protein; Cupin Domain Protein; Degradation Protein

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MEHYTWDAMEKEVLSETIARKIISGDKAMVAQVFLAKGAIVPEHHHESEQITYILEGALKFEIDGKEIVVGKGQVLRIPS
NVPHRAVALEDTLDLDIFSPIREDWLKKDDAYLRG

Sequences:

>Translated_115_residues
MEHYTWDAMEKEVLSETIARKIISGDKAMVAQVFLAKGAIVPEHHHESEQITYILEGALKFEIDGKEIVVGKGQVLRIPS
NVPHRAVALEDTLDLDIFSPIREDWLKKDDAYLRG
>Mature_115_residues
MEHYTWDAMEKEVLSETIARKIISGDKAMVAQVFLAKGAIVPEHHHESEQITYILEGALKFEIDGKEIVVGKGQVLRIPS
NVPHRAVALEDTLDLDIFSPIREDWLKKDDAYLRG

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13026; Mature: 13026

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHYTWDAMEKEVLSETIARKIISGDKAMVAQVFLAKGAIVPEHHHESEQITYILEGALK
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHEEEEEECEEE
FEIDGKEIVVGKGQVLRIPSNVPHRAVALEDTLDLDIFSPIREDWLKKDDAYLRG
EEECCCEEEEECCEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEHYTWDAMEKEVLSETIARKIISGDKAMVAQVFLAKGAIVPEHHHESEQITYILEGALK
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHEEEEEECEEE
FEIDGKEIVVGKGQVLRIPSNVPHRAVALEDTLDLDIFSPIREDWLKKDDAYLRG
EEECCCEEEEECCEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA