| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is fabG [H]
Identifier: 116626510
GI number: 116626510
Start: 9364858
End: 9365649
Strand: Direct
Name: fabG [H]
Synonym: Acid_7473
Alternate gene names: 116626510
Gene position: 9364858-9365649 (Clockwise)
Preceding gene: 116626509
Following gene: 116626511
Centisome position: 93.97
GC content: 68.06
Gene sequence:
>792_bases ATGGATCTTGGATTGAAGGGCCGCGTGGCGATTGTCGCCGCGTCCAGCCAGGGCCTGGGTAAGGCCGTGGCGATGGGACT CGCCCGGGAAGGAGCCCGGCTGGCGCTGTGCGCGCGAACCGAATCGGCGCTCGCGCGCGCGGCGGAGGAGATCCGGGCCG CTAGCGGTGCGGCCGTGATCACGCGCGTGGTGGACGTCACGCAAGCGGCCGAGGTGCGCACGTTCGTGGCGCGACCCGTG CAGGAGTATGGCCAGGTGGATATCTGCATCGCCAATGCCGGCGGACCTCCGGCGAAATCCTTCGCGGAAACGTCCCTGGA GGACTGGCATGCCGCCGCCGACCTCAACCTGATGAGCACGGTGCATTTTGCCAGGGAGATACTGCCGCTCATGCAGGCGC GGCGGTGGGGAAGGTTCATCGCGATTACCTCGATCACGGTCAAGCAGCCGGTGGAAGGCCTGATCCTCTCCAACGCTGTG CGCTCCGGCGTGAGCGGGCTGATGAAGACGCTGGCCAACGAATATGGTCCCTACAACGTGCTGGTCAACAGCGTGTGCCC GGGCTATACCGCGACGGCGCGCCTGCTTTCGCTGGCCGAGCGGATCGGCGAAAAGGAAGGCATTGCGCCCGCGCAGGTCG AGGAACGCTGGGCGCGGCAGGCCCCGCTCGGCCGGGTTGGGCGGCCGGAGGAGTTCGCGGACGCCGTGGTCTTCCTGGCC AGCGAGCGCGCCAGCTACATCACGGGCGTGGCACTCGCGGTGGACGGCGGCATCGTCAAAGGGCTGTACTGA
Upstream 100 bases:
>100_bases GCGCGGTGGCCTTGGAGGACACGCTGGATCTGGACATCTTCAGCCCGATCCGCGAGGACTGGTTGAAGAAGGACGACGCT TACCTGCGAGGCTGAGCGCG
Downstream 100 bases:
>100_bases ATGGCGTCGGCAATCACGCATTTTGTCGTCGGCGCCGGTTTGGCGCTGCCGGCGATGGAACTTCCGGCGCTACGCGGCGT GATGCCGCGCTGGGCGCTTC
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MDLGLKGRVAIVAASSQGLGKAVAMGLAREGARLALCARTESALARAAEEIRAASGAAVITRVVDVTQAAEVRTFVARPV QEYGQVDICIANAGGPPAKSFAETSLEDWHAAADLNLMSTVHFAREILPLMQARRWGRFIAITSITVKQPVEGLILSNAV RSGVSGLMKTLANEYGPYNVLVNSVCPGYTATARLLSLAERIGEKEGIAPAQVEERWARQAPLGRVGRPEEFADAVVFLA SERASYITGVALAVDGGIVKGLY
Sequences:
>Translated_263_residues MDLGLKGRVAIVAASSQGLGKAVAMGLAREGARLALCARTESALARAAEEIRAASGAAVITRVVDVTQAAEVRTFVARPV QEYGQVDICIANAGGPPAKSFAETSLEDWHAAADLNLMSTVHFAREILPLMQARRWGRFIAITSITVKQPVEGLILSNAV RSGVSGLMKTLANEYGPYNVLVNSVCPGYTATARLLSLAERIGEKEGIAPAQVEERWARQAPLGRVGRPEEFADAVVFLA SERASYITGVALAVDGGIVKGLY >Mature_263_residues MDLGLKGRVAIVAASSQGLGKAVAMGLAREGARLALCARTESALARAAEEIRAASGAAVITRVVDVTQAAEVRTFVARPV QEYGQVDICIANAGGPPAKSFAETSLEDWHAAADLNLMSTVHFAREILPLMQARRWGRFIAITSITVKQPVEGLILSNAV RSGVSGLMKTLANEYGPYNVLVNSVCPGYTATARLLSLAERIGEKEGIAPAQVEERWARQAPLGRVGRPEEFADAVVFLA SERASYITGVALAVDGGIVKGLY
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=256, Percent_Identity=32.421875, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI5031737, Length=253, Percent_Identity=31.6205533596838, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI19923817, Length=259, Percent_Identity=29.7297297297297, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI59889578, Length=232, Percent_Identity=33.6206896551724, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI66933014, Length=255, Percent_Identity=30.9803921568627, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI126723750, Length=259, Percent_Identity=29.7297297297297, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI33667109, Length=200, Percent_Identity=33.5, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI4503301, Length=256, Percent_Identity=29.6875, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI15277342, Length=265, Percent_Identity=29.0566037735849, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI40254992, Length=251, Percent_Identity=28.6852589641434, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI10190704, Length=253, Percent_Identity=26.0869565217391, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI4503817, Length=235, Percent_Identity=26.8085106382979, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI126723191, Length=202, Percent_Identity=28.2178217821782, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI20149619, Length=193, Percent_Identity=27.4611398963731, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI7705925, Length=259, Percent_Identity=24.7104247104247, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI7706318, Length=188, Percent_Identity=26.5957446808511, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI4758504, Length=267, Percent_Identity=26.5917602996255, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI109715829, Length=251, Percent_Identity=24.3027888446215, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI4504505, Length=194, Percent_Identity=27.319587628866, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1787335, Length=256, Percent_Identity=31.25, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI87082100, Length=256, Percent_Identity=31.25, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1787905, Length=261, Percent_Identity=29.1187739463602, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI87082160, Length=260, Percent_Identity=29.2307692307692, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1789208, Length=258, Percent_Identity=30.6201550387597, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=31.25, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1788459, Length=257, Percent_Identity=28.7937743190661, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1790717, Length=258, Percent_Identity=24.8062015503876, Blast_Score=88, Evalue=4e-19, Organism=Escherichia coli, GI1789378, Length=255, Percent_Identity=27.4509803921569, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786812, Length=263, Percent_Identity=26.2357414448669, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI2367365, Length=254, Percent_Identity=26.3779527559055, Blast_Score=69, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=33.4661354581673, Blast_Score=114, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17562910, Length=263, Percent_Identity=29.277566539924, Blast_Score=111, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17560676, Length=255, Percent_Identity=27.843137254902, Blast_Score=107, Evalue=7e-24, Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=30.1587301587302, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17559104, Length=268, Percent_Identity=29.1044776119403, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17536025, Length=262, Percent_Identity=29.3893129770992, Blast_Score=97, Evalue=9e-21, Organism=Caenorhabditis elegans, GI25147288, Length=256, Percent_Identity=29.296875, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17561402, Length=255, Percent_Identity=25.8823529411765, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17560150, Length=261, Percent_Identity=27.9693486590038, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17561272, Length=259, Percent_Identity=29.3436293436293, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17565030, Length=273, Percent_Identity=29.3040293040293, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17562904, Length=268, Percent_Identity=23.5074626865672, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17560332, Length=265, Percent_Identity=29.0566037735849, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17538480, Length=272, Percent_Identity=25.3676470588235, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17536651, Length=264, Percent_Identity=29.1666666666667, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17555706, Length=263, Percent_Identity=28.1368821292776, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17538486, Length=261, Percent_Identity=27.5862068965517, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17562906, Length=270, Percent_Identity=27.037037037037, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17562990, Length=264, Percent_Identity=27.6515151515151, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17544670, Length=265, Percent_Identity=24.5283018867925, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17560220, Length=278, Percent_Identity=24.4604316546763, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17531453, Length=268, Percent_Identity=26.865671641791, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI193204405, Length=272, Percent_Identity=26.1029411764706, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17551412, Length=276, Percent_Identity=25, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17568967, Length=204, Percent_Identity=27.9411764705882, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17562908, Length=266, Percent_Identity=25.5639097744361, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17563726, Length=264, Percent_Identity=24.6212121212121, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI71982365, Length=266, Percent_Identity=25.5639097744361, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI72000259, Length=274, Percent_Identity=24.0875912408759, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17508651, Length=253, Percent_Identity=28.0632411067194, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI115534694, Length=249, Percent_Identity=26.1044176706827, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI193203115, Length=259, Percent_Identity=26.6409266409266, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193203117, Length=261, Percent_Identity=26.8199233716475, Blast_Score=68, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6324126, Length=261, Percent_Identity=26.8199233716475, Blast_Score=92, Evalue=9e-20, Organism=Saccharomyces cerevisiae, GI6322861, Length=195, Percent_Identity=28.7179487179487, Blast_Score=80, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6323882, Length=253, Percent_Identity=23.7154150197628, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI28571526, Length=253, Percent_Identity=31.6205533596838, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI23397609, Length=258, Percent_Identity=30.2325581395349, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI21357041, Length=253, Percent_Identity=29.6442687747036, Blast_Score=111, Evalue=5e-25, Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=30.5882352941176, Blast_Score=108, Evalue=2e-24, Organism=Drosophila melanogaster, GI24639444, Length=262, Percent_Identity=28.6259541984733, Blast_Score=104, Evalue=6e-23, Organism=Drosophila melanogaster, GI21355319, Length=255, Percent_Identity=28.6274509803922, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24644337, Length=256, Percent_Identity=27.734375, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI18859837, Length=217, Percent_Identity=29.9539170506912, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI21355631, Length=177, Percent_Identity=28.2485875706215, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24643142, Length=254, Percent_Identity=25.5905511811024, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI161076933, Length=188, Percent_Identity=28.7234042553192, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24584748, Length=188, Percent_Identity=28.7234042553192, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI21358495, Length=226, Percent_Identity=26.5486725663717, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI21357673, Length=192, Percent_Identity=26.0416666666667, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24584752, Length=189, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27760; Mature: 27760
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLGLKGRVAIVAASSQGLGKAVAMGLAREGARLALCARTESALARAAEEIRAASGAAVI CCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHH TRVVDVTQAAEVRTFVARPVQEYGQVDICIANAGGPPAKSFAETSLEDWHAAADLNLMST HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCHHHHHH VHFAREILPLMQARRWGRFIAITSITVKQPVEGLILSNAVRSGVSGLMKTLANEYGPYNV HHHHHHHHHHHHHHHCCCEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LVNSVCPGYTATARLLSLAERIGEKEGIAPAQVEERWARQAPLGRVGRPEEFADAVVFLA HHHCCCCCHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH SERASYITGVALAVDGGIVKGLY HHHHHHHHHHHHEECCCHHCCCC >Mature Secondary Structure MDLGLKGRVAIVAASSQGLGKAVAMGLAREGARLALCARTESALARAAEEIRAASGAAVI CCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHH TRVVDVTQAAEVRTFVARPVQEYGQVDICIANAGGPPAKSFAETSLEDWHAAADLNLMST HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCHHHHHH VHFAREILPLMQARRWGRFIAITSITVKQPVEGLILSNAVRSGVSGLMKTLANEYGPYNV HHHHHHHHHHHHHHHCCCEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LVNSVCPGYTATARLLSLAERIGEKEGIAPAQVEERWARQAPLGRVGRPEEFADAVVFLA HHHCCCCCHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH SERASYITGVALAVDGGIVKGLY HHHHHHHHHHHHEECCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]