| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116626118
Identifier: 116626118
GI number: 116626118
Start: 8892738
End: 8893760
Strand: Reverse
Name: 116626118
Synonym: Acid_7076
Alternate gene names: NA
Gene position: 8893760-8892738 (Counterclockwise)
Preceding gene: 116626121
Following gene: 116626117
Centisome position: 89.24
GC content: 62.07
Gene sequence:
>1023_bases ATGAGAGTTTTGTTCATCGGCGGCACCGGAGTGATCTCCACGGCTTGTACGGCGCTGGCAGCGGAGCGCGGGATCGATTT GACGCTGGCGACCCGCGGACGCAGGTCGGCCGGGCTGCCAGCGGGAGTGAAGACGCTGGCGGTGGATATGGAGGATGCGG TCGGTGCGGCGCGCGCGTTCGGCGATCAGCGGTTCGACGTAGTAGTGGATTGGATCGCCTTCACGCCGGAGCAGATCGAA CGCGACCTCGCGCTATTTCGCGGGCGCACGGGGCAGTATATCTTTATCAGTTCGGCGAGCGCCTACCAGAAGCCGGCGAG TCATTACCTGATTACCGAATCGACGCCGCTCGGCAATCCGTTCTGGGATTACTCGCGGAATAAGATCGCGTGCGAAGAGC GGCTGCTGCGGGCATGGCGGGAGGAGGGCTTTCCGGTAACGATCGTGCGACCGTCGCTGACTTACGGGGAGACGCAGATT CCGCTGGCGGTGAATAGCTGGGCGAAATCCTTCACAGCGATCGACCGGATGCGGCGCGGGAAGAAGGTGATCGTGCCGGG TGACGGATCCTCCCTGTGGGTGATCACGCATAACACCGATTTCGCCAAGGGGCTCGTCGGACTGCTTGGGCATGAGCAGG CAATCGGGCATGCTTTCCACATCACGACCGATGAGGTAATGACGTGGGACCAGTTTTACCGGATCGCGGGGGCGGTGGCA GGTGCGGAGCCGCGACTGGTGCATATTCCCTCGGACTTCATCGCGGCCTGCATCCCTGAGAAATTGGGCAGCCTGACCGG AGATAAGGCGGTCAGCGTAGTCTTCGATAACAGTAAGATTAAACGGTTCGTGCCGGAGTATCGCGCGACGGTGCGGTTCG GCGAGGGGATCCGGCGGACGATCGCGTGGTTCGACCAGGATGCAGCGCGGCGGGAGATTGATGACGCGGCCAACACGCAA TGGGACAAGCTGATCGCGGCGTACGAGAAGGGAATGAGCGCGGCGGTGCGCGAATTTGATTGA
Upstream 100 bases:
>100_bases GCCGATGATGATTCCGATCAGTATCTGCATGTTCAGGCTCACGCGTAGTATACCTTTCGGACGCGCCGGTATGGTTTACA AGGCGTGTTACAAAGGCTGC
Downstream 100 bases:
>100_bases GCGGGTACGACGGACGATCGAGCGGTACGGAATGTTCGCGAGCGGGGCGCGTGTGGCGGTGGGCGTCTCGGGCGGCGCGG ACTCGGTGTGCCTGCTGCAC
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: NAD Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase; Nucleotide Sugar Epimerase; Isoflavone Reductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Nucleoside-Diphosphate-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; Oxidoreductase Gfo/Idh/MocA Family; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Oxidoreductase; DTDP-Glucose 4 6-Dehydratase; Sugar Dehydratase; NAD Dependent Epimerase/Dehydratase Family; Lipoprotein
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MRVLFIGGTGVISTACTALAAERGIDLTLATRGRRSAGLPAGVKTLAVDMEDAVGAARAFGDQRFDVVVDWIAFTPEQIE RDLALFRGRTGQYIFISSASAYQKPASHYLITESTPLGNPFWDYSRNKIACEERLLRAWREEGFPVTIVRPSLTYGETQI PLAVNSWAKSFTAIDRMRRGKKVIVPGDGSSLWVITHNTDFAKGLVGLLGHEQAIGHAFHITTDEVMTWDQFYRIAGAVA GAEPRLVHIPSDFIAACIPEKLGSLTGDKAVSVVFDNSKIKRFVPEYRATVRFGEGIRRTIAWFDQDAARREIDDAANTQ WDKLIAAYEKGMSAAVREFD
Sequences:
>Translated_340_residues MRVLFIGGTGVISTACTALAAERGIDLTLATRGRRSAGLPAGVKTLAVDMEDAVGAARAFGDQRFDVVVDWIAFTPEQIE RDLALFRGRTGQYIFISSASAYQKPASHYLITESTPLGNPFWDYSRNKIACEERLLRAWREEGFPVTIVRPSLTYGETQI PLAVNSWAKSFTAIDRMRRGKKVIVPGDGSSLWVITHNTDFAKGLVGLLGHEQAIGHAFHITTDEVMTWDQFYRIAGAVA GAEPRLVHIPSDFIAACIPEKLGSLTGDKAVSVVFDNSKIKRFVPEYRATVRFGEGIRRTIAWFDQDAARREIDDAANTQ WDKLIAAYEKGMSAAVREFD >Mature_340_residues MRVLFIGGTGVISTACTALAAERGIDLTLATRGRRSAGLPAGVKTLAVDMEDAVGAARAFGDQRFDVVVDWIAFTPEQIE RDLALFRGRTGQYIFISSASAYQKPASHYLITESTPLGNPFWDYSRNKIACEERLLRAWREEGFPVTIVRPSLTYGETQI PLAVNSWAKSFTAIDRMRRGKKVIVPGDGSSLWVITHNTDFAKGLVGLLGHEQAIGHAFHITTDEVMTWDQFYRIAGAVA GAEPRLVHIPSDFIAACIPEKLGSLTGDKAVSVVFDNSKIKRFVPEYRATVRFGEGIRRTIAWFDQDAARREIDDAANTQ WDKLIAAYEKGMSAAVREFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37549; Mature: 37549
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLFIGGTGVISTACTALAAERGIDLTLATRGRRSAGLPAGVKTLAVDMEDAVGAARAF CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHH GDQRFDVVVDWIAFTPEQIERDLALFRGRTGQYIFISSASAYQKPASHYLITESTPLGNP CCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCEEEECCCCCCCC FWDYSRNKIACEERLLRAWREEGFPVTIVRPSLTYGETQIPLAVNSWAKSFTAIDRMRRG CCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEECCEEHHHHHHHHHHHHHHHCC KKVIVPGDGSSLWVITHNTDFAKGLVGLLGHEQAIGHAFHITTDEVMTWDQFYRIAGAVA CEEEEECCCCEEEEEECCCCHHHHHHHHHCCHHHHCEEEEEEHHHHHHHHHHHHHHHHHC GAEPRLVHIPSDFIAACIPEKLGSLTGDKAVSVVFDNSKIKRFVPEYRATVRFGEGIRRT CCCCCEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH IAWFDQDAARREIDDAANTQWDKLIAAYEKGMSAAVREFD HHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRVLFIGGTGVISTACTALAAERGIDLTLATRGRRSAGLPAGVKTLAVDMEDAVGAARAF CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHH GDQRFDVVVDWIAFTPEQIERDLALFRGRTGQYIFISSASAYQKPASHYLITESTPLGNP CCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCEEEECCCCCCCC FWDYSRNKIACEERLLRAWREEGFPVTIVRPSLTYGETQIPLAVNSWAKSFTAIDRMRRG CCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEECCEEHHHHHHHHHHHHHHHCC KKVIVPGDGSSLWVITHNTDFAKGLVGLLGHEQAIGHAFHITTDEVMTWDQFYRIAGAVA CEEEEECCCCEEEEEECCCCHHHHHHHHHCCHHHHCEEEEEEHHHHHHHHHHHHHHHHHC GAEPRLVHIPSDFIAACIPEKLGSLTGDKAVSVVFDNSKIKRFVPEYRATVRFGEGIRRT CCCCCEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH IAWFDQDAARREIDDAANTQWDKLIAAYEKGMSAAVREFD HHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA