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The map label for this gene is 116626121

Identifier: 116626121

GI number: 116626121

Start: 8895783

End: 8896181

Strand: Reverse

Name: 116626121

Synonym: Acid_7079

Alternate gene names: NA

Gene position: 8896181-8895783 (Counterclockwise)

Preceding gene: 116626122

Following gene: 116626118

Centisome position: 89.27

GC content: 57.39

Gene sequence:

>399_bases
GTGATCGGCGTCACTCTGGATACAAACATCTACGTGTCGGCTCTGGAATTCGGCGGAGCAGCGGCTCGCCTGCTGGGAAT
GGCCCGTCGCGGCGACTTCCGCCTGGATGTGTCAGATGCAATTCTTGGCGAGTTGATTACGGTGTTGCGTGACGATTTTC
ATTGGGAGGCCTACAGGTTGCACTTCGCCCGAGAGAAGATCACGGGCGTGGCGAATCGGGTCACGCCTGCGCAGACACTT
GACGTGATCAACGAAGATCCAGACGACAACCGCATCCTTGAGTGCGCGGTCGAAGCTGGTTCCGATTACATCGTTGCTGG
CGACAAAGACCTGCTACGGCTTGGAGCGTTTGGCGATATCAAGATCGTCACGGCAGCGGACTTCCTGAAGCGAGAGTAG

Upstream 100 bases:

>100_bases
GGCGTATGGCCATGAAACAGGCATCGTCTCCGGATATACCGAAGAGGATGTACCTGAGATCGTGAAGAACCGCCGAAAAA
TCAACGCACAAAGGCGCTGA

Downstream 100 bases:

>100_bases
ACAAGCCAGAGTCCTGTCTTACTTTCCCGACTTATCAGCCACCAATAAATTCGCCAGCATACGGGAGTGACCGATGCCGG
GGAGGAGGGCGATGCGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MIGVTLDTNIYVSALEFGGAAARLLGMARRGDFRLDVSDAILGELITVLRDDFHWEAYRLHFAREKITGVANRVTPAQTL
DVINEDPDDNRILECAVEAGSDYIVAGDKDLLRLGAFGDIKIVTAADFLKRE

Sequences:

>Translated_132_residues
MIGVTLDTNIYVSALEFGGAAARLLGMARRGDFRLDVSDAILGELITVLRDDFHWEAYRLHFAREKITGVANRVTPAQTL
DVINEDPDDNRILECAVEAGSDYIVAGDKDLLRLGAFGDIKIVTAADFLKRE
>Mature_132_residues
MIGVTLDTNIYVSALEFGGAAARLLGMARRGDFRLDVSDAILGELITVLRDDFHWEAYRLHFAREKITGVANRVTPAQTL
DVINEDPDDNRILECAVEAGSDYIVAGDKDLLRLGAFGDIKIVTAADFLKRE

Specific function: Unknown

COG id: COG1569

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14540; Mature: 14540

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGVTLDTNIYVSALEFGGAAARLLGMARRGDFRLDVSDAILGELITVLRDDFHWEAYRL
CEEEEECCCEEEEEECCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHH
HFAREKITGVANRVTPAQTLDVINEDPDDNRILECAVEAGSDYIVAGDKDLLRLGAFGDI
HHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEEECCCCEEEECCHHHEEECCCCCE
KIVTAADFLKRE
EEEEEHHHHHCC
>Mature Secondary Structure
MIGVTLDTNIYVSALEFGGAAARLLGMARRGDFRLDVSDAILGELITVLRDDFHWEAYRL
CEEEEECCCEEEEEECCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHH
HFAREKITGVANRVTPAQTLDVINEDPDDNRILECAVEAGSDYIVAGDKDLLRLGAFGDI
HHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEEECCCCEEEECCHHHEEECCCCCE
KIVTAADFLKRE
EEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA