| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is mutL
Identifier: 116626082
GI number: 116626082
Start: 8852933
End: 8854915
Strand: Reverse
Name: mutL
Synonym: Acid_7040
Alternate gene names: 116626082
Gene position: 8854915-8852933 (Counterclockwise)
Preceding gene: 116626090
Following gene: 116626079
Centisome position: 88.85
GC content: 64.55
Gene sequence:
>1983_bases ATGGGCCGCATCCGAATTCTTCCCGATCAGGTCGCCAATAAAATCGCCGCGGGCGAAGTGGTGGAGCGTCCGGCGTCCGT AGTCAAGGAACTGTTGGAGAACTCGCTCGACGCGGGCGCCACGGAAGTGCGCGTGGAGGTGGAGGCCGGCGGGCGCCGCC TGATCCGCATTGTGGACGATGGCTTCGGCATGCTGCGCGACGACGCGCTGCTCGCTTTTGAACGCCACGCGACCAGCAAA CTACGCGACGTCAAGGATCTGCTCTCCATCGCCACGCTCGGTTTCCGCGGCGAAGCGCTGCCCTCCATCGCGTCGGTCTC GCGGCTGCTGCTGGAGACGCGGTCGATGGAAGAGCCCACCGGCACGCGCATCGAAATCGCGGGTGGAAAGATGCTGCGCT GCGAGGAGGCGGCGCTCGGCGGCGGCACCGTGATCACGGTCCGCGACCTGTTCTACAACGTGCCCGCACGGCGCAAATTC CTGCGCACGGAACCGACTGAACTGGCGCACATCGCGTCGCTGGTGACGCACTACAGCCTGGCGCATCCCGACAAGAGTTT TCGCCTCAGCACCGGGCCGACGGAGTTGCTGGGGGTCACGCCGGTGGCGTCCATGAAGGAGCGGGTGTACCAGGTTTTCG GCAGCCAGATATTGGACGAGCTGGTGGAGATCGGTGTGCGCGAGCGTGATCTATTCCTGCCGCCGCCCAGCGTACCGCCC TCGCAGGCGATCGCGGAGTACCGCAGCACGGAGCCCGAAGATCCGCCCTTCCGCCGCTTCCGTCTCACCGGTTTTTTTTC GCGGCCGCAGATTCAGAAATCGAATCGCAATTCGATCTACATTTTCGTCAACGGGCGCCTGATCCGGGACCGGCTGGTGC TGCACGCGCTCTCCTCCGCGTATCACAACCTGATGCCGGCTTCGGCCTATCCTTTCGCACTGCTGTTCCTGGAGTGCGAC GCCGAAGAGGTGGATGTCAACGTGCATCCCTCGAAGACCGAGGTGCGGTTCCGCCACGGATCGTTCCTGCACGATTTTAT CCGCGACAGCATTCGCGAGCGGCTGATGGAGAGCCGTCCGGCGCCGACGTTTTCGCCGGTTCCGATGGCCGCGCCGCCGG CCCAACAGGGTGCACAGTTGCCGTATTCGGAATTCAGCCAGATGCTGGAGAACGAACAGCAGGCGGCGTCGGAGATGGCG GAGCCTGCGATTGCCGGTGAACCTGCGATGCCGGAATTCAATCTGCGAGCGACGGCGCCGCCTACGCCGCGGCTGGATTT CAGCGCGCCGCCGATCGAAGTCGCGCCCGGTCCGCCGCCTTCGGGGAAGCTCTCGCGACGGCTCGACATGCACGGCGAAT TTCCGCTGGAGGCAATTCCCGCGCCCGAGATGTCGCTCTCCGCGCTCAGCGACCTGCGGCCGCTGGGACAGATCCACGAG AGCTTCATCATCGCCGCGGGACGCGACGGCTTGTGGATCATCGACCAGCACGTGGCCCATGAGCGCATTCTCTTCGAACA AGTGCTCAAGCAGCGCGCCGCCGGCCGGGTGGAGACGCAGCGCCTGCTGATGCCGATGATCCTGCAACTCAGCGCGGAGC AACAGATCGATTACGCGCGCATCGCCGACGAATTGCACGCCTCGGGCTTCGAGACCGAGCCCTTCGGCAATCGGACGATC GCGGTGAAAGCCGCGCCAGCCGCCGTGGGGCCGCAGGATCTGGAGCGCATCCTCTTTGAGATCCTGGAGATCGCCGAGAA CGAGATGCGGACCAACTCACTCGACGATCTGCGACGCAACATCTGCGCGTCGATCGCTTGCCGGGCTGCGATCAAGATCA ACATGCGCCTGGATCTCGCCAAGATGGAATGGCTGCTGCGCGCGCTCGCCGCCACCGATTGTCCCATGAGCTGCCCACAC GGCCGCCCCATCGCGATGCACTACTCCACGCGAGAGATATTGAAGGCGTTCCACAGGATTTGA
Upstream 100 bases:
>100_bases GTTTTCGCAGATTGCGAGCAAACAGATGCACAGTAGTACACTGCGGCACGGCACGAACTGAAATCAGTGCGGGGTCGGGT TATAGTGGGAATTCCTTCCC
Downstream 100 bases:
>100_bases GGCAACCGTGCTCATTCTATTTCGTCGCCCGGAACGGGAGTGTTCCCACGGCCAGCTCGTTTTAATATCCGTTTTGCCTT GACCACATTGCCGCGTTCCG
Product: DNA mismatch repair protein MutL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 660; Mature: 659
Protein sequence:
>660_residues MGRIRILPDQVANKIAAGEVVERPASVVKELLENSLDAGATEVRVEVEAGGRRLIRIVDDGFGMLRDDALLAFERHATSK LRDVKDLLSIATLGFRGEALPSIASVSRLLLETRSMEEPTGTRIEIAGGKMLRCEEAALGGGTVITVRDLFYNVPARRKF LRTEPTELAHIASLVTHYSLAHPDKSFRLSTGPTELLGVTPVASMKERVYQVFGSQILDELVEIGVRERDLFLPPPSVPP SQAIAEYRSTEPEDPPFRRFRLTGFFSRPQIQKSNRNSIYIFVNGRLIRDRLVLHALSSAYHNLMPASAYPFALLFLECD AEEVDVNVHPSKTEVRFRHGSFLHDFIRDSIRERLMESRPAPTFSPVPMAAPPAQQGAQLPYSEFSQMLENEQQAASEMA EPAIAGEPAMPEFNLRATAPPTPRLDFSAPPIEVAPGPPPSGKLSRRLDMHGEFPLEAIPAPEMSLSALSDLRPLGQIHE SFIIAAGRDGLWIIDQHVAHERILFEQVLKQRAAGRVETQRLLMPMILQLSAEQQIDYARIADELHASGFETEPFGNRTI AVKAAPAAVGPQDLERILFEILEIAENEMRTNSLDDLRRNICASIACRAAIKINMRLDLAKMEWLLRALAATDCPMSCPH GRPIAMHYSTREILKAFHRI
Sequences:
>Translated_660_residues MGRIRILPDQVANKIAAGEVVERPASVVKELLENSLDAGATEVRVEVEAGGRRLIRIVDDGFGMLRDDALLAFERHATSK LRDVKDLLSIATLGFRGEALPSIASVSRLLLETRSMEEPTGTRIEIAGGKMLRCEEAALGGGTVITVRDLFYNVPARRKF LRTEPTELAHIASLVTHYSLAHPDKSFRLSTGPTELLGVTPVASMKERVYQVFGSQILDELVEIGVRERDLFLPPPSVPP SQAIAEYRSTEPEDPPFRRFRLTGFFSRPQIQKSNRNSIYIFVNGRLIRDRLVLHALSSAYHNLMPASAYPFALLFLECD AEEVDVNVHPSKTEVRFRHGSFLHDFIRDSIRERLMESRPAPTFSPVPMAAPPAQQGAQLPYSEFSQMLENEQQAASEMA EPAIAGEPAMPEFNLRATAPPTPRLDFSAPPIEVAPGPPPSGKLSRRLDMHGEFPLEAIPAPEMSLSALSDLRPLGQIHE SFIIAAGRDGLWIIDQHVAHERILFEQVLKQRAAGRVETQRLLMPMILQLSAEQQIDYARIADELHASGFETEPFGNRTI AVKAAPAAVGPQDLERILFEILEIAENEMRTNSLDDLRRNICASIACRAAIKINMRLDLAKMEWLLRALAATDCPMSCPH GRPIAMHYSTREILKAFHRI >Mature_659_residues GRIRILPDQVANKIAAGEVVERPASVVKELLENSLDAGATEVRVEVEAGGRRLIRIVDDGFGMLRDDALLAFERHATSKL RDVKDLLSIATLGFRGEALPSIASVSRLLLETRSMEEPTGTRIEIAGGKMLRCEEAALGGGTVITVRDLFYNVPARRKFL RTEPTELAHIASLVTHYSLAHPDKSFRLSTGPTELLGVTPVASMKERVYQVFGSQILDELVEIGVRERDLFLPPPSVPPS QAIAEYRSTEPEDPPFRRFRLTGFFSRPQIQKSNRNSIYIFVNGRLIRDRLVLHALSSAYHNLMPASAYPFALLFLECDA EEVDVNVHPSKTEVRFRHGSFLHDFIRDSIRERLMESRPAPTFSPVPMAAPPAQQGAQLPYSEFSQMLENEQQAASEMAE PAIAGEPAMPEFNLRATAPPTPRLDFSAPPIEVAPGPPPSGKLSRRLDMHGEFPLEAIPAPEMSLSALSDLRPLGQIHES FIIAAGRDGLWIIDQHVAHERILFEQVLKQRAAGRVETQRLLMPMILQLSAEQQIDYARIADELHASGFETEPFGNRTIA VKAAPAAVGPQDLERILFEILEIAENEMRTNSLDDLRRNICASIACRAAIKINMRLDLAKMEWLLRALAATDCPMSCPHG RPIAMHYSTREILKAFHRI
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family
Homologues:
Organism=Homo sapiens, GI4557757, Length=367, Percent_Identity=34.0599455040872, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI4505913, Length=359, Percent_Identity=28.6908077994429, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI310128478, Length=359, Percent_Identity=28.6908077994429, Blast_Score=142, Evalue=7e-34, Organism=Homo sapiens, GI4505911, Length=348, Percent_Identity=27.0114942528736, Blast_Score=126, Evalue=7e-29, Organism=Homo sapiens, GI189458898, Length=348, Percent_Identity=27.0114942528736, Blast_Score=125, Evalue=2e-28, Organism=Homo sapiens, GI189458896, Length=185, Percent_Identity=35.6756756756757, Blast_Score=113, Evalue=5e-25, Organism=Homo sapiens, GI263191589, Length=271, Percent_Identity=28.0442804428044, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI91992160, Length=387, Percent_Identity=26.6149870801034, Blast_Score=109, Evalue=6e-24, Organism=Homo sapiens, GI310128480, Length=312, Percent_Identity=27.2435897435897, Blast_Score=109, Evalue=7e-24, Organism=Homo sapiens, GI91992162, Length=387, Percent_Identity=26.6149870801034, Blast_Score=109, Evalue=8e-24, Organism=Homo sapiens, GI310128482, Length=220, Percent_Identity=25.9090909090909, Blast_Score=70, Evalue=8e-12, Organism=Homo sapiens, GI310128484, Length=260, Percent_Identity=25, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI310128486, Length=220, Percent_Identity=25.9090909090909, Blast_Score=69, Evalue=2e-11, Organism=Escherichia coli, GI1790612, Length=590, Percent_Identity=35.2542372881356, Blast_Score=265, Evalue=5e-72, Organism=Caenorhabditis elegans, GI71991825, Length=347, Percent_Identity=31.9884726224784, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17562796, Length=360, Percent_Identity=28.3333333333333, Blast_Score=128, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6323819, Length=339, Percent_Identity=35.3982300884956, Blast_Score=190, Evalue=8e-49, Organism=Saccharomyces cerevisiae, GI6324247, Length=345, Percent_Identity=25.7971014492754, Blast_Score=109, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6325093, Length=740, Percent_Identity=22.027027027027, Blast_Score=108, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6323063, Length=383, Percent_Identity=25.065274151436, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI17136968, Length=366, Percent_Identity=34.1530054644809, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI17136970, Length=361, Percent_Identity=27.9778393351801, Blast_Score=122, Evalue=8e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTL_SOLUE (Q01QW7)
Other databases:
- EMBL: CP000473 - RefSeq: YP_828238.1 - ProteinModelPortal: Q01QW7 - SMR: Q01QW7 - STRING: Q01QW7 - GeneID: 4426917 - GenomeReviews: CP000473_GR - KEGG: sus:Acid_7040 - NMPDR: fig|234267.9.peg.6675 - eggNOG: COG0323 - HOGENOM: HBG520262 - OMA: FLFINNR - PhylomeDB: Q01QW7 - ProtClustDB: CLSK774931 - HAMAP: MF_00149 - InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.565.10 - Gene3D: G3DSA:3.30.230.10 - PANTHER: PTHR10073 - SMART: SM00387 - SMART: SM00853 - TIGRFAMs: TIGR00585
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 73399; Mature: 73268
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRIRILPDQVANKIAAGEVVERPASVVKELLENSLDAGATEVRVEVEAGGRRLIRIVDD CCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEECC GFGMLRDDALLAFERHATSKLRDVKDLLSIATLGFRGEALPSIASVSRLLLETRSMEEPT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCC GTRIEIAGGKMLRCEEAALGGGTVITVRDLFYNVPARRKFLRTEPTELAHIASLVTHYSL CCEEEECCCCEEEEHHHCCCCCCEEEEHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHH AHPDKSFRLSTGPTELLGVTPVASMKERVYQVFGSQILDELVEIGVRERDLFLPPPSVPP CCCCCCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCH SQAIAEYRSTEPEDPPFRRFRLTGFFSRPQIQKSNRNSIYIFVNGRLIRDRLVLHALSSA HHHHHHHHCCCCCCCCHHEEEEEECCCCCCCCCCCCCEEEEEECCEEHHHHHHHHHHHHH YHNLMPASAYPFALLFLECDAEEVDVNVHPSKTEVRFRHGSFLHDFIRDSIRERLMESRP HHHCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHCCC APTFSPVPMAAPPAQQGAQLPYSEFSQMLENEQQAASEMAEPAIAGEPAMPEFNLRATAP CCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCC PTPRLDFSAPPIEVAPGPPPSGKLSRRLDMHGEFPLEAIPAPEMSLSALSDLRPLGQIHE CCCCCCCCCCCEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH SFIIAAGRDGLWIIDQHVAHERILFEQVLKQRAAGRVETQRLLMPMILQLSAEQQIDYAR HEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHH IADELHASGFETEPFGNRTIAVKAAPAAVGPQDLERILFEILEIAENEMRTNSLDDLRRN HHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ICASIACRAAIKINMRLDLAKMEWLLRALAATDCPMSCPHGRPIAMHYSTREILKAFHRI HHHHHHHHEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHCC >Mature Secondary Structure GRIRILPDQVANKIAAGEVVERPASVVKELLENSLDAGATEVRVEVEAGGRRLIRIVDD CCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEECC GFGMLRDDALLAFERHATSKLRDVKDLLSIATLGFRGEALPSIASVSRLLLETRSMEEPT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCC GTRIEIAGGKMLRCEEAALGGGTVITVRDLFYNVPARRKFLRTEPTELAHIASLVTHYSL CCEEEECCCCEEEEHHHCCCCCCEEEEHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHH AHPDKSFRLSTGPTELLGVTPVASMKERVYQVFGSQILDELVEIGVRERDLFLPPPSVPP CCCCCCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCH SQAIAEYRSTEPEDPPFRRFRLTGFFSRPQIQKSNRNSIYIFVNGRLIRDRLVLHALSSA HHHHHHHHCCCCCCCCHHEEEEEECCCCCCCCCCCCCEEEEEECCEEHHHHHHHHHHHHH YHNLMPASAYPFALLFLECDAEEVDVNVHPSKTEVRFRHGSFLHDFIRDSIRERLMESRP HHHCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHCCC APTFSPVPMAAPPAQQGAQLPYSEFSQMLENEQQAASEMAEPAIAGEPAMPEFNLRATAP CCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCC PTPRLDFSAPPIEVAPGPPPSGKLSRRLDMHGEFPLEAIPAPEMSLSALSDLRPLGQIHE CCCCCCCCCCCEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH SFIIAAGRDGLWIIDQHVAHERILFEQVLKQRAAGRVETQRLLMPMILQLSAEQQIDYAR HEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHH IADELHASGFETEPFGNRTIAVKAAPAAVGPQDLERILFEILEIAENEMRTNSLDDLRRN HHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ICASIACRAAIKINMRLDLAKMEWLLRALAATDCPMSCPHGRPIAMHYSTREILKAFHRI HHHHHHHHEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA