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The map label for this gene is recA [H]

Identifier: 116626079

GI number: 116626079

Start: 8851304

End: 8851978

Strand: Reverse

Name: recA [H]

Synonym: Acid_7037

Alternate gene names: 116626079

Gene position: 8851978-8851304 (Counterclockwise)

Preceding gene: 116626082

Following gene: 116626078

Centisome position: 88.82

GC content: 67.56

Gene sequence:

>675_bases
ATGGGTGCAGCAGTCCTGAAAAAACAGTTCGAATCGGTGCTGGGCGGCGCCCAGGACTGGCAGTCCCGGCCCGAGCCGGA
ACTCGTCCCGACCGGCGTTGCGGATGTCGATTCAGCTACCGGCGGGCTGCCCCGCGGATGCCTCACCGAGATCGTCGGGC
CAGCGTCTTCCGGCCGCACCAGCCTGCTGCTTTCCATTCTTGCCGCCGCGACTGCGCGTCAGGAAACCTGCGCGCTGGTG
GATGCGGAGGACGCCTTCGCCCCGCACTCCGCGGCCGACGCCGGGGTGCAGCTCTCGCGGCTGCTCTGGGTACGGTGCGG
ACATAGCGCGGAGCACGCGCTGAAGGCAGCCGATTTGCTGATTCAGGGCGGCGGCTTCGGGCTCGTGGTGATGGATTTGG
GCGATACCGCGCCTGCGACCGCGCGCCGCATTTCGTTGACTTCGTGGTTTCGCCTGCGCCGCGCGGTGGAACATACGCCG
ACCGTTTTGCTTTCGATCGCGCGCCAGGCCAACGCCAAAACCTGCGCGTCGCTGGTCATCGAGTGCGGACGGCGGCAGGA
GCGCTGGAGCGGCACGCGCCATGTCTCGCGGCTGCTGCGCGGGTTCGATGTGCGCGCCCAATCCATGAAAAGGAGGACGC
TGTGTTCGCCTGTCTTCACGGCCCGGGCAATCTGA

Upstream 100 bases:

>100_bases
GGGGTTATGCGTTCCATAAAAGCGTCTGTCAAGCCTTTCCTTGACTTAAGGCCTTTCATCCGGTAAAAGTAGAGTACGGG
CGAATAAAAGGCGAATATTG

Downstream 100 bases:

>100_bases
CCTCGCTGGCCTTCGAATTTTCGCCTACGGTGGAGGCCACGTCGGCAGACACCGTGACCTTCGATGTCGGCGGACTTGAC
CGGCTGTTCGGCCTGCCGCA

Product: RecA domain-containing protein

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MGAAVLKKQFESVLGGAQDWQSRPEPELVPTGVADVDSATGGLPRGCLTEIVGPASSGRTSLLLSILAAATARQETCALV
DAEDAFAPHSAADAGVQLSRLLWVRCGHSAEHALKAADLLIQGGGFGLVVMDLGDTAPATARRISLTSWFRLRRAVEHTP
TVLLSIARQANAKTCASLVIECGRRQERWSGTRHVSRLLRGFDVRAQSMKRRTLCSPVFTARAI

Sequences:

>Translated_224_residues
MGAAVLKKQFESVLGGAQDWQSRPEPELVPTGVADVDSATGGLPRGCLTEIVGPASSGRTSLLLSILAAATARQETCALV
DAEDAFAPHSAADAGVQLSRLLWVRCGHSAEHALKAADLLIQGGGFGLVVMDLGDTAPATARRISLTSWFRLRRAVEHTP
TVLLSIARQANAKTCASLVIECGRRQERWSGTRHVSRLLRGFDVRAQSMKRRTLCSPVFTARAI
>Mature_223_residues
GAAVLKKQFESVLGGAQDWQSRPEPELVPTGVADVDSATGGLPRGCLTEIVGPASSGRTSLLLSILAAATARQETCALVD
AEDAFAPHSAADAGVQLSRLLWVRCGHSAEHALKAADLLIQGGGFGLVVMDLGDTAPATARRISLTSWFRLRRAVEHTPT
VLLSIARQANAKTCASLVIECGRRQERWSGTRHVSRLLRGFDVRAQSMKRRTLCSPVFTARAI

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=160, Percent_Identity=33.125, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 23867; Mature: 23735

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAAVLKKQFESVLGGAQDWQSRPEPELVPTGVADVDSATGGLPRGCLTEIVGPASSGRT
CCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHH
SLLLSILAAATARQETCALVDAEDAFAPHSAADAGVQLSRLLWVRCGHSAEHALKAADLL
HHHHHHHHHHHHHHHHHEEECCHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IQGGGFGLVVMDLGDTAPATARRISLTSWFRLRRAVEHTPTVLLSIARQANAKTCASLVI
EECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ECGRRQERWSGTRHVSRLLRGFDVRAQSMKRRTLCSPVFTARAI
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GAAVLKKQFESVLGGAQDWQSRPEPELVPTGVADVDSATGGLPRGCLTEIVGPASSGRT
CHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHH
SLLLSILAAATARQETCALVDAEDAFAPHSAADAGVQLSRLLWVRCGHSAEHALKAADLL
HHHHHHHHHHHHHHHHHEEECCHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IQGGGFGLVVMDLGDTAPATARRISLTSWFRLRRAVEHTPTVLLSIARQANAKTCASLVI
EECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ECGRRQERWSGTRHVSRLLRGFDVRAQSMKRRTLCSPVFTARAI
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA