| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116626071
Identifier: 116626071
GI number: 116626071
Start: 8840788
End: 8841615
Strand: Reverse
Name: 116626071
Synonym: Acid_7029
Alternate gene names: NA
Gene position: 8841615-8840788 (Counterclockwise)
Preceding gene: 116626073
Following gene: 116626070
Centisome position: 88.72
GC content: 60.99
Gene sequence:
>828_bases TTGTCACTGCTGAATCCCGAACATCGCGAACACCTGGAGCTGATTCGCCCCACGGCGCGTTACATCATGGAAACCGAGGC GCATGTCTATGCGCTCGCGATTTCCGCCAGCGTGCTGCTCTCGTTCTTTCCGTTCTGCAACGTCATGCTTTCGCTCTGCC GCATGCTCCATTGGCCTGCGGCGGAGGAGGCGATCTACCTCGCGCTCCGCGATTACTTTCCGGGTGAGCTGGCCGGTTTT CTGAAGCGCAACCTGGCCCTGCAAGGCCACCTGCAGCTCACCAGCATGGTGTTGCTGCTGTTTACCGCCAACGGTATTTT TGAGCCGCTCGAGGTCGCGCTCAACCGCGCCTGGGGCATCACCAGGAATCGTTCATACCTCAAGAACCAGCTGATTGCGC TCGGCATGATCTTTATCTGCGGAGCGCTGGCGATGCTTTCCCTGATGTTTACGGCGTTCAACCGGCAGTGGCTGGGCGCC TGGAGCGCCCTGGCGCCGGTGCAGTCCTTTCTCAACCTGCTGATCTTCAAAATCGCCGCGGTGCCAATCTCCATCCTGGC CCTGTTCCTGGTCTACTGGCTGCTGCCCAATCGCAAGATTTCTCCCTCCCGCGTTGCCCCCGCCGCGATCTACGTTGGAC TTGTGCTGGAGGGCCTGAAGTACGTGAACCTGGCGATCGCACCTTACCTGCAGGCCAAGCTGGAGCACGAGTACTCCATC TTCCGCCACTCCGTCGCCATCCTCCTGTGGAGCTTTATCGCCGCGATGGTCGTCCTCGCCGGCGCCGAGTGGACCGCCCG CCACGGCGATCGGGATTCGCTATCGTAG
Upstream 100 bases:
>100_bases TCTCGCGCAGCATGCGGGTCAGCGCGCGCCCGACATTACCGTAGCCGATGATCGCCAGTTTCAAGGTTCGATTGTATCCT TAGTCACGCTACTCTAGAAT
Downstream 100 bases:
>100_bases TTCTGATGAGAGACTGGAAGCGCATCGCCGAAGCTCACGGGCTCACCCTTACGGCCCGCGAATTGGATCGCATCACGCCC CCGCTGGCGGCGCTGGAAGA
Product: ribonuclease BN
Products: NA
Alternate protein names: YihY Family Protein
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MSLLNPEHREHLELIRPTARYIMETEAHVYALAISASVLLSFFPFCNVMLSLCRMLHWPAAEEAIYLALRDYFPGELAGF LKRNLALQGHLQLTSMVLLLFTANGIFEPLEVALNRAWGITRNRSYLKNQLIALGMIFICGALAMLSLMFTAFNRQWLGA WSALAPVQSFLNLLIFKIAAVPISILALFLVYWLLPNRKISPSRVAPAAIYVGLVLEGLKYVNLAIAPYLQAKLEHEYSI FRHSVAILLWSFIAAMVVLAGAEWTARHGDRDSLS
Sequences:
>Translated_275_residues MSLLNPEHREHLELIRPTARYIMETEAHVYALAISASVLLSFFPFCNVMLSLCRMLHWPAAEEAIYLALRDYFPGELAGF LKRNLALQGHLQLTSMVLLLFTANGIFEPLEVALNRAWGITRNRSYLKNQLIALGMIFICGALAMLSLMFTAFNRQWLGA WSALAPVQSFLNLLIFKIAAVPISILALFLVYWLLPNRKISPSRVAPAAIYVGLVLEGLKYVNLAIAPYLQAKLEHEYSI FRHSVAILLWSFIAAMVVLAGAEWTARHGDRDSLS >Mature_274_residues SLLNPEHREHLELIRPTARYIMETEAHVYALAISASVLLSFFPFCNVMLSLCRMLHWPAAEEAIYLALRDYFPGELAGFL KRNLALQGHLQLTSMVLLLFTANGIFEPLEVALNRAWGITRNRSYLKNQLIALGMIFICGALAMLSLMFTAFNRQWLGAW SALAPVQSFLNLLIFKIAAVPISILALFLVYWLLPNRKISPSRVAPAAIYVGLVLEGLKYVNLAIAPYLQAKLEHEYSIF RHSVAILLWSFIAAMVVLAGAEWTARHGDRDSLS
Specific function: Unknown
COG id: COG1295
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30903; Mature: 30772
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLNPEHREHLELIRPTARYIMETEAHVYALAISASVLLSFFPFCNVMLSLCRMLHWPA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AEEAIYLALRDYFPGELAGFLKRNLALQGHLQLTSMVLLLFTANGIFEPLEVALNRAWGI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC TRNRSYLKNQLIALGMIFICGALAMLSLMFTAFNRQWLGAWSALAPVQSFLNLLIFKIAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPISILALFLVYWLLPNRKISPSRVAPAAIYVGLVLEGLKYVNLAIAPYLQAKLEHEYSI HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRHSVAILLWSFIAAMVVLAGAEWTARHGDRDSLS HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCC >Mature Secondary Structure SLLNPEHREHLELIRPTARYIMETEAHVYALAISASVLLSFFPFCNVMLSLCRMLHWPA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AEEAIYLALRDYFPGELAGFLKRNLALQGHLQLTSMVLLLFTANGIFEPLEVALNRAWGI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC TRNRSYLKNQLIALGMIFICGALAMLSLMFTAFNRQWLGAWSALAPVQSFLNLLIFKIAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPISILALFLVYWLLPNRKISPSRVAPAAIYVGLVLEGLKYVNLAIAPYLQAKLEHEYSI HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRHSVAILLWSFIAAMVVLAGAEWTARHGDRDSLS HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA