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The map label for this gene is rex [H]

Identifier: 116626004

GI number: 116626004

Start: 8751831

End: 8752520

Strand: Reverse

Name: rex [H]

Synonym: Acid_6962

Alternate gene names: 116626004

Gene position: 8752520-8751831 (Counterclockwise)

Preceding gene: 116626005

Following gene: 116626003

Centisome position: 87.83

GC content: 59.13

Gene sequence:

>690_bases
ATGAAACCCGGCACCCATCTTCGGCGCGAGATCCCGGAAGCCAGCCTTCGACGTCTTCCGGTCTACTACCGCAACCTCCA
GGCAATGGTAGCGGCCGGAGCCAGCCAGGTATCCTGCGCCGACCTGGCGCGGGTACTTGGCCTCGACCCTACCCAGGTGC
GGAAAGATATCGAAATGACCGGAATTGTCGGCAAGCCACGTGTGGGCTATCCGCTCGGTGAACTTATCCCTTGGCTGGAG
AACTTTCTGGGTTGGAACCGGCCGAAAGAGGCGGTGCTCGCCGGTGCGGGCAGCCTCGGCAGTGCACTGCTGGGCTACGA
AAAGTTTCGGCGTCACGGGATGCTGATCGTTGCCGCCTTCGATACCGACCCGGAGAAGATCGGCGAGCGGATCCACGGCC
GTGAAGTCCAACCGTTGATGTTTCTCCCGGATTTCGTCCGGCAGCACAAGACCCAGGTAGGCGTGATCGCGACGCCTGCC
GAGACCGCGCAATCGGTGACGAACCTGATGGTTTCCGGCGGGATTCAGGCAATTTGGAACTTCGCTCCCACCCACATCCA
GGTGCCGGCCGGAATCATCCTACAAAATGAAGACCTTTACCATTCACTGGCATCCCTCTCTTTCAAGCTGGAAAGCAAAT
TGGGAGTAAGCCCGGTGGAAAACGGAACCTGCTATGCCAAAGACAATTGA

Upstream 100 bases:

>100_bases
TACATTTTAAAGAGAAACAGTTAAAAATAACCGAAACTACTTGAACTGCTCGCGCCTTTGATGTAAATTCGAATCGAGAA
AGATTTCTCGATACCTGGCG

Downstream 100 bases:

>100_bases
TGTAACCGAACTCGTTCTCCGCGACGGCCACCAGAGCCTGATGGCCACGCGGATGGCAATGGAAGACATGATTCCCGCCT
GCGCGGATATCGACCAGGCG

Product: redox-sensing transcriptional repressor Rex

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKPGTHLRREIPEASLRRLPVYYRNLQAMVAAGASQVSCADLARVLGLDPTQVRKDIEMTGIVGKPRVGYPLGELIPWLE
NFLGWNRPKEAVLAGAGSLGSALLGYEKFRRHGMLIVAAFDTDPEKIGERIHGREVQPLMFLPDFVRQHKTQVGVIATPA
ETAQSVTNLMVSGGIQAIWNFAPTHIQVPAGIILQNEDLYHSLASLSFKLESKLGVSPVENGTCYAKDN

Sequences:

>Translated_229_residues
MKPGTHLRREIPEASLRRLPVYYRNLQAMVAAGASQVSCADLARVLGLDPTQVRKDIEMTGIVGKPRVGYPLGELIPWLE
NFLGWNRPKEAVLAGAGSLGSALLGYEKFRRHGMLIVAAFDTDPEKIGERIHGREVQPLMFLPDFVRQHKTQVGVIATPA
ETAQSVTNLMVSGGIQAIWNFAPTHIQVPAGIILQNEDLYHSLASLSFKLESKLGVSPVENGTCYAKDN
>Mature_229_residues
MKPGTHLRREIPEASLRRLPVYYRNLQAMVAAGASQVSCADLARVLGLDPTQVRKDIEMTGIVGKPRVGYPLGELIPWLE
NFLGWNRPKEAVLAGAGSLGSALLGYEKFRRHGMLIVAAFDTDPEKIGERIHGREVQPLMFLPDFVRQHKTQVGVIATPA
ETAQSVTNLMVSGGIQAIWNFAPTHIQVPAGIILQNEDLYHSLASLSFKLESKLGVSPVENGTCYAKDN

Specific function: Modulates transcription in response to changes in cellular NADH/NAD(+) redox state [H]

COG id: COG2344

COG function: function code R; AT-rich DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory rex family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR009718
- InterPro:   IPR022876
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02629 CoA_binding; PF06971 Put_DNA-bind_N [H]

EC number: NA

Molecular weight: Translated: 25081; Mature: 25081

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPGTHLRREIPEASLRRLPVYYRNLQAMVAAGASQVSCADLARVLGLDPTQVRKDIEMT
CCCCHHHHHHCCHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
GIVGKPRVGYPLGELIPWLENFLGWNRPKEAVLAGAGSLGSALLGYEKFRRHGMLIVAAF
CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEEE
DTDPEKIGERIHGREVQPLMFLPDFVRQHKTQVGVIATPAETAQSVTNLMVSGGIQAIWN
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHCCHHHHHC
FAPTHIQVPAGIILQNEDLYHSLASLSFKLESKLGVSPVENGTCYAKDN
CCCCEEECCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC
>Mature Secondary Structure
MKPGTHLRREIPEASLRRLPVYYRNLQAMVAAGASQVSCADLARVLGLDPTQVRKDIEMT
CCCCHHHHHHCCHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
GIVGKPRVGYPLGELIPWLENFLGWNRPKEAVLAGAGSLGSALLGYEKFRRHGMLIVAAF
CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEEE
DTDPEKIGERIHGREVQPLMFLPDFVRQHKTQVGVIATPAETAQSVTNLMVSGGIQAIWN
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHCCHHHHHC
FAPTHIQVPAGIILQNEDLYHSLASLSFKLESKLGVSPVENGTCYAKDN
CCCCEEECCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA