| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is mutA [H]
Identifier: 116625998
GI number: 116625998
Start: 8746104
End: 8747549
Strand: Reverse
Name: mutA [H]
Synonym: Acid_6956
Alternate gene names: 116625998
Gene position: 8747549-8746104 (Counterclockwise)
Preceding gene: 116625999
Following gene: 116625997
Centisome position: 87.78
GC content: 63.28
Gene sequence:
>1446_bases ATGCCTGAAACCGCTGTCGCGGAAGAGATCCTGAACCTCACGCGCGATTTTCCGCCCGTTCCCACCGAGGCCTGGGAAGC CGCCATCGCCAAAGACCTGAAGGGCGCCGACTACGAAAAGAAACTGGTCTGGCGAACCGAAGAAGGCCTCGGCATTCGTC CCTACTACCGTAAGGAAGCGCTCGCCGGACTCGACGCTCAGGTCCAAACGATGCCCGGCCACTATCCCTTCGCGCGCGGC GCGGGCCGGGGGTGGGAAATCGCGCAAGACTCCAAACCCGGTCCTCAAGCCGTGCGGGCGGACGTATTGCACGAGGCCGG GGCGCATGCCATTCAGGAGCTGGGCTACGCGATTGCCGCCGGTGTAGAACGCCTGGCCGCGCTGACTGCAACCCTGCCGG TAGACACCATCGCTCCCCAGATCGAGTTCGTCTTCGCCGTTGGACCCAGCTACTTCATCGAGATCGCCAAGCTGCGCGCC GCGCGCATTCTTTGGGCGCTGGCAGTCGATGCTTTCGGATCGGGCGACGATGGGGCGTGCCGCATGCGCCTGCACGTGCG AACGCCGCAGCGCAATAAGAGCGCGTACGACCGGTACACGAATTTACTGCGCGTGACCACCGAAGCCGCCTCGGCCGTGA TCGGCGGCTGCGACCAGCTCAATGTGGAGCCCTTCGCGTTCGACGCGCACCTCGCGCTCAACGTCCAGCGCATTCTCCAG GAAGAAGCGCATCTCGACGCGGTCGCCGATCCGGCGGGCGGGTCTTACTACATCGAGGCATTGACCGATTCACTGGCGCG CGAAGCGTGGAAGCTCTTCCAGCAAATCGAGGCCGAAGGCGGATATGCGAAAGCACTCGCCTCCGGTGCGATCGCGAAGG TTCTTGCGCAAACCCGCGCGGCGCGCGAGAAAGCTTATTCCGGGCGGCGACGCACCCTGGTGGGAGTCAATAACTATCCC AGCGTGACAGAGAAGGCTCCGGATGCGGAGTTCCCAGCGCCGGGCCCAGCGACTCCGCTGCCGCAAGTTCGGATCGCCGA ACCCTTCGAGCAAATCCGTCGGCGCACCAGCGAACACGCGATTGCAACGGGGCGATATCCCAAGGTATTGCTGCTCAAAC GGGGCGACGTCAGGATGAAAGGCGCGCGCTCCAACTTCTGCTTCAATTTCTTCGGCTGCGCGGGCTTCGACATGGTGGAA GCCGAGGAGTACGCCGGCACCGACGCCGACCTCGCCATCCTTTGCAGCTCCGACCCCGAGTACCTTGCCTTCGCGCAGGA AGTCTGCGCCAACGTGAAGATACCGGTGCTCGTCGCAGGAAATCCCAAGGATCAAATCGAAGCCTTGCAGGCCGCGGGCG TACTAGGCTTCATCCATGTCTTCAGCGACCTGATCCAAACCCTGACCGAGTGGCAGGACAAACTCGGCATGAGGAGCAGC CAATGA
Upstream 100 bases:
>100_bases CGCAAGGGTTCGCGCGGAACCACAGTCTTCTTCTTGCACCCCAAGACCACAGAGGCCGCCGCGTTCGGCTATCTGCTCGA AGTAGTGCAGGAGGGCGCAC
Downstream 100 bases:
>100_bases GACCGGACTTCTCGAAAATCGATTACCACATCAAACCGCAGAACTCCGAGATCTCCGGACCTGCCCAGGGCTCGTCCGTC TGGAAGACCGCCGAGCAGAT
Product: methylmalonyl-CoA mutase
Products: NA
Alternate protein names: MCM-beta [H]
Number of amino acids: Translated: 481; Mature: 480
Protein sequence:
>481_residues MPETAVAEEILNLTRDFPPVPTEAWEAAIAKDLKGADYEKKLVWRTEEGLGIRPYYRKEALAGLDAQVQTMPGHYPFARG AGRGWEIAQDSKPGPQAVRADVLHEAGAHAIQELGYAIAAGVERLAALTATLPVDTIAPQIEFVFAVGPSYFIEIAKLRA ARILWALAVDAFGSGDDGACRMRLHVRTPQRNKSAYDRYTNLLRVTTEAASAVIGGCDQLNVEPFAFDAHLALNVQRILQ EEAHLDAVADPAGGSYYIEALTDSLAREAWKLFQQIEAEGGYAKALASGAIAKVLAQTRAAREKAYSGRRRTLVGVNNYP SVTEKAPDAEFPAPGPATPLPQVRIAEPFEQIRRRTSEHAIATGRYPKVLLLKRGDVRMKGARSNFCFNFFGCAGFDMVE AEEYAGTDADLAILCSSDPEYLAFAQEVCANVKIPVLVAGNPKDQIEALQAAGVLGFIHVFSDLIQTLTEWQDKLGMRSS Q
Sequences:
>Translated_481_residues MPETAVAEEILNLTRDFPPVPTEAWEAAIAKDLKGADYEKKLVWRTEEGLGIRPYYRKEALAGLDAQVQTMPGHYPFARG AGRGWEIAQDSKPGPQAVRADVLHEAGAHAIQELGYAIAAGVERLAALTATLPVDTIAPQIEFVFAVGPSYFIEIAKLRA ARILWALAVDAFGSGDDGACRMRLHVRTPQRNKSAYDRYTNLLRVTTEAASAVIGGCDQLNVEPFAFDAHLALNVQRILQ EEAHLDAVADPAGGSYYIEALTDSLAREAWKLFQQIEAEGGYAKALASGAIAKVLAQTRAAREKAYSGRRRTLVGVNNYP SVTEKAPDAEFPAPGPATPLPQVRIAEPFEQIRRRTSEHAIATGRYPKVLLLKRGDVRMKGARSNFCFNFFGCAGFDMVE AEEYAGTDADLAILCSSDPEYLAFAQEVCANVKIPVLVAGNPKDQIEALQAAGVLGFIHVFSDLIQTLTEWQDKLGMRSS Q >Mature_480_residues PETAVAEEILNLTRDFPPVPTEAWEAAIAKDLKGADYEKKLVWRTEEGLGIRPYYRKEALAGLDAQVQTMPGHYPFARGA GRGWEIAQDSKPGPQAVRADVLHEAGAHAIQELGYAIAAGVERLAALTATLPVDTIAPQIEFVFAVGPSYFIEIAKLRAA RILWALAVDAFGSGDDGACRMRLHVRTPQRNKSAYDRYTNLLRVTTEAASAVIGGCDQLNVEPFAFDAHLALNVQRILQE EAHLDAVADPAGGSYYIEALTDSLAREAWKLFQQIEAEGGYAKALASGAIAKVLAQTRAAREKAYSGRRRTLVGVNNYPS VTEKAPDAEFPAPGPATPLPQVRIAEPFEQIRRRTSEHAIATGRYPKVLLLKRGDVRMKGARSNFCFNFFGCAGFDMVEA EEYAGTDADLAILCSSDPEYLAFAQEVCANVKIPVLVAGNPKDQIEALQAAGVLGFIHVFSDLIQTLTEWQDKLGMRSSQ
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates [H]
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methylmalonyl-CoA mutase family [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=235, Percent_Identity=38.2978723404255, Blast_Score=140, Evalue=2e-33, Organism=Escherichia coli, GI1789284, Length=235, Percent_Identity=37.0212765957447, Blast_Score=162, Evalue=4e-41, Organism=Caenorhabditis elegans, GI25144500, Length=227, Percent_Identity=36.1233480176211, Blast_Score=146, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR004608 [H]
Pfam domain/function: PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 52346; Mature: 52215
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPETAVAEEILNLTRDFPPVPTEAWEAAIAKDLKGADYEKKLVWRTEEGLGIRPYYRKEA CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHEEEECCCCCCCCCHHHHHH LAGLDAQVQTMPGHYPFARGAGRGWEIAQDSKPGPQAVRADVLHEAGAHAIQELGYAIAA HHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GVERLAALTATLPVDTIAPQIEFVFAVGPSYFIEIAKLRAARILWALAVDAFGSGDDGAC HHHHHHHHHHHCCHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE RMRLHVRTPQRNKSAYDRYTNLLRVTTEAASAVIGGCDQLNVEPFAFDAHLALNVQRILQ EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHH EEAHLDAVADPAGGSYYIEALTDSLAREAWKLFQQIEAEGGYAKALASGAIAKVLAQTRA HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AREKAYSGRRRTLVGVNNYPSVTEKAPDAEFPAPGPATPLPQVRIAEPFEQIRRRTSEHA HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC IATGRYPKVLLLKRGDVRMKGARSNFCFNFFGCAGFDMVEAEEYAGTDADLAILCSSDPE EECCCCCEEEEEECCCEEECCCCCCCEEEEECCCCCCHHHHHHHCCCCCCEEEEECCCCH YLAFAQEVCANVKIPVLVAGNPKDQIEALQAAGVLGFIHVFSDLIQTLTEWQDKLGMRSS HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC Q C >Mature Secondary Structure PETAVAEEILNLTRDFPPVPTEAWEAAIAKDLKGADYEKKLVWRTEEGLGIRPYYRKEA CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHEEEECCCCCCCCCHHHHHH LAGLDAQVQTMPGHYPFARGAGRGWEIAQDSKPGPQAVRADVLHEAGAHAIQELGYAIAA HHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GVERLAALTATLPVDTIAPQIEFVFAVGPSYFIEIAKLRAARILWALAVDAFGSGDDGAC HHHHHHHHHHHCCHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE RMRLHVRTPQRNKSAYDRYTNLLRVTTEAASAVIGGCDQLNVEPFAFDAHLALNVQRILQ EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHH EEAHLDAVADPAGGSYYIEALTDSLAREAWKLFQQIEAEGGYAKALASGAIAKVLAQTRA HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AREKAYSGRRRTLVGVNNYPSVTEKAPDAEFPAPGPATPLPQVRIAEPFEQIRRRTSEHA HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC IATGRYPKVLLLKRGDVRMKGARSNFCFNFFGCAGFDMVEAEEYAGTDADLAILCSSDPE EECCCCCEEEEEECCCEEECCCCCCCEEEEECCCCCCHHHHHHHCCCCCCEEEEECCCCH YLAFAQEVCANVKIPVLVAGNPKDQIEALQAAGVLGFIHVFSDLIQTLTEWQDKLGMRSS HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8566763; 12949112 [H]