Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116625942

Identifier: 116625942

GI number: 116625942

Start: 8673118

End: 8673927

Strand: Reverse

Name: 116625942

Synonym: Acid_6900

Alternate gene names: NA

Gene position: 8673927-8673118 (Counterclockwise)

Preceding gene: 116625944

Following gene: 116625940

Centisome position: 87.04

GC content: 60.0

Gene sequence:

>810_bases
ATGCAAGAAACTCGATCCACAGGTCTCCTGTTCTTGGCGGCTGTGACTATCGCGGCAGCACCGCCTCAGCCGATTTCTTA
CGTGGCGTCCGTCAAGCTCAACAACGATGCGAACCCTCGCTCGATGTCCGAATACTCGCCCGGAGGCCGATTCACTGCAA
ACGCCGTCATGATCGGGTCTCTTATCCGAGCTGCCTACCGCATCCAGGGCTATCAACTTGTGGGAGCGCCGGACTGGATC
GGCGACAAACGCTTCGATATTTCGGCGAAGTCCGACGACAATCCCGCTCCGTCGCAGCAGTCGCTGTTGCAGGCGCTGCT
CAAGGATCGCTTCCAGCTCGTGGTCCACAACGAGACGCGCGAAATGCCGGTATTAGCGCTGGTAGTGGCAAGAAGTGATG
GAAGGCTCGGTCCGCAACTAACGAAATCCAGCTTCGATTGCGCTGCATACATGGCAGGACCGCACCCTCCTCCGCAGCCG
GGGAAGGCGCCGAACTGCGGAACCAACATCGGTTTGGGCGTGCTACACGGCAAAGCCATCCCGTTATCGACGCTAGCAAC
CAGCCTCGCGCCCTTCGCGGGCCGCTTCACGATCGACAAGACGGACCTCGCGGGGGGCTATGACGTCGAGCTCAAATGGA
CACCAGACAACATTCCGGCGAACCTGCCGCCCGGATTCGAACCGCCCGATCCCTTGGGGCCCTCCATCTTCACGGCCTTG
CAAGATCAACTCGGCTTGAAACTGGTGACGGACAAGGCTCGCGTGCCGGTATTGGTCGTCGACCGATTAGAACTGCCAAC
GGCGAACTGA

Upstream 100 bases:

>100_bases
TGCCTCGTCGGGGGAATCTGTGGGTCACCGGATTGCGCTCGCACCCTTCGTATGCTATTTTAGCAGCACGGTGCTGCTAA
AGCAGCACCGTGGAGAGATT

Downstream 100 bases:

>100_bases
TCTAGCTCCTCTAATCGAAGCCTCGTCGGCGGGATTTGTCGGTGAATTTGTCCGGATTCAGCGGGACGATTGACTGAGGA
AGCGGTGGACTTTCTTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MQETRSTGLLFLAAVTIAAAPPQPISYVASVKLNNDANPRSMSEYSPGGRFTANAVMIGSLIRAAYRIQGYQLVGAPDWI
GDKRFDISAKSDDNPAPSQQSLLQALLKDRFQLVVHNETREMPVLALVVARSDGRLGPQLTKSSFDCAAYMAGPHPPPQP
GKAPNCGTNIGLGVLHGKAIPLSTLATSLAPFAGRFTIDKTDLAGGYDVELKWTPDNIPANLPPGFEPPDPLGPSIFTAL
QDQLGLKLVTDKARVPVLVVDRLELPTAN

Sequences:

>Translated_269_residues
MQETRSTGLLFLAAVTIAAAPPQPISYVASVKLNNDANPRSMSEYSPGGRFTANAVMIGSLIRAAYRIQGYQLVGAPDWI
GDKRFDISAKSDDNPAPSQQSLLQALLKDRFQLVVHNETREMPVLALVVARSDGRLGPQLTKSSFDCAAYMAGPHPPPQP
GKAPNCGTNIGLGVLHGKAIPLSTLATSLAPFAGRFTIDKTDLAGGYDVELKWTPDNIPANLPPGFEPPDPLGPSIFTAL
QDQLGLKLVTDKARVPVLVVDRLELPTAN
>Mature_269_residues
MQETRSTGLLFLAAVTIAAAPPQPISYVASVKLNNDANPRSMSEYSPGGRFTANAVMIGSLIRAAYRIQGYQLVGAPDWI
GDKRFDISAKSDDNPAPSQQSLLQALLKDRFQLVVHNETREMPVLALVVARSDGRLGPQLTKSSFDCAAYMAGPHPPPQP
GKAPNCGTNIGLGVLHGKAIPLSTLATSLAPFAGRFTIDKTDLAGGYDVELKWTPDNIPANLPPGFEPPDPLGPSIFTAL
QDQLGLKLVTDKARVPVLVVDRLELPTAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28659; Mature: 28659

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQETRSTGLLFLAAVTIAAAPPQPISYVASVKLNNDANPRSMSEYSPGGRFTANAVMIGS
CCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHCCCCCCEEHHHHHHHH
LIRAAYRIQGYQLVGAPDWIGDKRFDISAKSDDNPAPSQQSLLQALLKDRFQLVVHNETR
HHHHHHHHCCEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCC
EMPVLALVVARSDGRLGPQLTKSSFDCAAYMAGPHPPPQPGKAPNCGTNIGLGVLHGKAI
CCCEEEEEEECCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCC
PLSTLATSLAPFAGRFTIDKTDLAGGYDVELKWTPDNIPANLPPGFEPPDPLGPSIFTAL
CHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
QDQLGLKLVTDKARVPVLVVDRLELPTAN
HHHCCEEEEECCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MQETRSTGLLFLAAVTIAAAPPQPISYVASVKLNNDANPRSMSEYSPGGRFTANAVMIGS
CCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHCCCCCCEEHHHHHHHH
LIRAAYRIQGYQLVGAPDWIGDKRFDISAKSDDNPAPSQQSLLQALLKDRFQLVVHNETR
HHHHHHHHCCEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCC
EMPVLALVVARSDGRLGPQLTKSSFDCAAYMAGPHPPPQPGKAPNCGTNIGLGVLHGKAI
CCCEEEEEEECCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCC
PLSTLATSLAPFAGRFTIDKTDLAGGYDVELKWTPDNIPANLPPGFEPPDPLGPSIFTAL
CHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
QDQLGLKLVTDKARVPVLVVDRLELPTAN
HHHCCEEEEECCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA