| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625930
Identifier: 116625930
GI number: 116625930
Start: 8659663
End: 8660397
Strand: Direct
Name: 116625930
Synonym: Acid_6887
Alternate gene names: NA
Gene position: 8659663-8660397 (Clockwise)
Preceding gene: 116625929
Following gene: 116625931
Centisome position: 86.9
GC content: 58.91
Gene sequence:
>735_bases GTGACTGAACCTTCATCCGATGGCGAATTCCTACGGCGCGCTCTCAAGCCCGGAGCGGACTGCCTATCCGTGGAAAAGCT GGAGATCTGCTTGCAAGACGGTCCGGCCCGGCCCGACCTGTCCAGGCACCTGGAGTCGTGCGCACATTGCCGCGCGAAAC TGGACTTGCTCCGTTCATTCTACGAAGCCCCTCGTGATTCGACGGAAGCGGACGCCGTTCGGCAGATCGAACAACGCCTG CGGAAGCCACGTGCGATCGCTCCCCCCGCGGCCCGTTCGCGATGGCAGGAATTCCTTCAGGTTCGTTGGCTCAGCCCCAT CGCGGTGGCGATGGCTGGAGTATTGATCGTAGCGGCCGTGAGTCTCGAATGGCGGCGTCACACAGCCCCGAATCTGCTTC CGCTCAATGCCCGCGAGGAAAGCGTTTTCCGTTCGGGAAAATTGAACGTCACCGCTCCGACTGGCGATCTTCTGGTAGCG CCAACGTCAATCCGGTGGCAAGCAATTGCGGGAGCCGCAACTTATCGGGTCCGAATTATGGAAGTGGATCACTCCGAACT CTGGACCGCTGCCACCTCCGAATCGAGTGTAGACCTGCCGCGGCAGATACAGGCAAAGATGGTACCTGCGAAGTCTTTGT TACTACAAGTGAACGCCTTCGACAGTTCCGGCCGGCAACTGGCGGAATCGGATGTCGTTCGATTTCGCCTTTTACAAAAA GTTTACAGCCGTTGA
Upstream 100 bases:
>100_bases AACCAGAGCGGATCCAAGGCTTACATTGTGAGTGCCAGGCGCAAGCTCACCCGCGCATTCGAGAAATGGCGGCAGGCGTC AAGCGGCAAAGGGGTACGGC
Downstream 100 bases:
>100_bases ACCACTTCCCGGAAAACGAGCCGCACTATTGATTATTCACTGTTGATCATTGCTGTGAACGGGGATATATGAGAGTGTGT ATCACGATTGGGCTGGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MTEPSSDGEFLRRALKPGADCLSVEKLEICLQDGPARPDLSRHLESCAHCRAKLDLLRSFYEAPRDSTEADAVRQIEQRL RKPRAIAPPAARSRWQEFLQVRWLSPIAVAMAGVLIVAAVSLEWRRHTAPNLLPLNAREESVFRSGKLNVTAPTGDLLVA PTSIRWQAIAGAATYRVRIMEVDHSELWTAATSESSVDLPRQIQAKMVPAKSLLLQVNAFDSSGRQLAESDVVRFRLLQK VYSR
Sequences:
>Translated_244_residues MTEPSSDGEFLRRALKPGADCLSVEKLEICLQDGPARPDLSRHLESCAHCRAKLDLLRSFYEAPRDSTEADAVRQIEQRL RKPRAIAPPAARSRWQEFLQVRWLSPIAVAMAGVLIVAAVSLEWRRHTAPNLLPLNAREESVFRSGKLNVTAPTGDLLVA PTSIRWQAIAGAATYRVRIMEVDHSELWTAATSESSVDLPRQIQAKMVPAKSLLLQVNAFDSSGRQLAESDVVRFRLLQK VYSR >Mature_243_residues TEPSSDGEFLRRALKPGADCLSVEKLEICLQDGPARPDLSRHLESCAHCRAKLDLLRSFYEAPRDSTEADAVRQIEQRLR KPRAIAPPAARSRWQEFLQVRWLSPIAVAMAGVLIVAAVSLEWRRHTAPNLLPLNAREESVFRSGKLNVTAPTGDLLVAP TSIRWQAIAGAATYRVRIMEVDHSELWTAATSESSVDLPRQIQAKMVPAKSLLLQVNAFDSSGRQLAESDVVRFRLLQKV YSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27234; Mature: 27102
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPSSDGEFLRRALKPGADCLSVEKLEICLQDGPARPDLSRHLESCAHCRAKLDLLRSF CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH YEAPRDSTEADAVRQIEQRLRKPRAIAPPAARSRWQEFLQVRWLSPIAVAMAGVLIVAAV HHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SLEWRRHTAPNLLPLNAREESVFRSGKLNVTAPTGDLLVAPTSIRWQAIAGAATYRVRIM HHHHHHCCCCCEEECCCCHHHHHHCCCEEEECCCCCEEECCCCCCHHHHHCCEEEEEEEE EVDHSELWTAATSESSVDLPRQIQAKMVPAKSLLLQVNAFDSSGRQLAESDVVRFRLLQK EECCHHHHHHCCCCCCCCCCHHHHHHHCCHHHHEEEEECCCCCCHHHHHHHHHHHHHHHH VYSR HHCC >Mature Secondary Structure TEPSSDGEFLRRALKPGADCLSVEKLEICLQDGPARPDLSRHLESCAHCRAKLDLLRSF CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH YEAPRDSTEADAVRQIEQRLRKPRAIAPPAARSRWQEFLQVRWLSPIAVAMAGVLIVAAV HHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SLEWRRHTAPNLLPLNAREESVFRSGKLNVTAPTGDLLVAPTSIRWQAIAGAATYRVRIM HHHHHHCCCCCEEECCCCHHHHHHCCCEEEECCCCCEEECCCCCCHHHHHCCEEEEEEEE EVDHSELWTAATSESSVDLPRQIQAKMVPAKSLLLQVNAFDSSGRQLAESDVVRFRLLQK EECCHHHHHHCCCCCCCCCCHHHHHHHCCHHHHEEEEECCCCCCHHHHHHHHHHHHHHHH VYSR HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA