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The map label for this gene is pehX [H]

Identifier: 116625911

GI number: 116625911

Start: 8621420

End: 8623081

Strand: Reverse

Name: pehX [H]

Synonym: Acid_6868

Alternate gene names: 116625911

Gene position: 8623081-8621420 (Counterclockwise)

Preceding gene: 116625912

Following gene: 116625910

Centisome position: 86.53

GC content: 62.27

Gene sequence:

>1662_bases
ATGAAACTTCCTGGCAATTCCATAACACGGCGCAGGTGCTTCGGCTGGCTGGCAGCCGCGCCCCTCGCTTCACAGATGCT
GAGTGCCGCGCCGCAGAGCGCGGACTCCAAGACCGCGGGAATCCGCGTCCACAATATCCTGGATTATGGCGCGAAGGGCG
ATGGCACCACGCTCGATACTGAGGCCCTGCAAGCGGCCATAGACGCCTGCACCGCAGACCGGGGCGGCACCGTACTGGTC
CCCGCCGGCGTCTTCGTCATCGGTACGGTGGAAATGAAGAGCAACGTCACGCTGCGCATCGCGGCGCAGGGCAAACTGTT
GGGTAGCGCCGATGGCAAGCAATACAGCGCCGCGGCCGGCATTCCGCTGCACGGCGATTCCACGCTGGAGGACGGCAACG
TCGGCCTCATATTCGCCGTCAATGCCGAGAATATCACCGTCGAAGGCCCGGGCACCATCGATGGGCAGGGCGCGCAATTC
CGCAGTCCGAGCCGCGGTGTGCTTCCGCCTTCGGGACGCGGCGGCGCCGACCGCCCTTACCATCTTCTGTTTCACCGCTG
CCGGAACCTGCGGATACGCAACCTTTCGCTGGTAGCCTGCGCCTTCCACTCCATCCGCGTGATTCAGAGCAGTTCCGTTT
GGATGGAGAACCTCCGCATTCACAACCGAGTCAACTCCAACAACGATGGATTTCACTTCATCAGCAGCGAGTTCGTGCAC
GTCAGCAACTGCGATGTGCAGACGCAGGACGATGCCTGCGCGCTCTTCGGCACGTGCCGATACGTCACCGTCACCAACTG
CACCTTCAGCACGCGCTGGTCGGTCTTCCGTTTCGGCGGGGGCAATCCACAGGACATCACCATTTCCAACTGCATCATCT
ACCAGACCTACGGATGCCCGATCAAACTGCACTTCGGACCAGACTCGCAAGTGGAGAACCTCATGTTCTCCAATCTGGCG
ATGCATGACGTGACCGGTCCGATTTCCATCAACCTCGACAATCACCGGCGCCGGGGGATGGCCGCACCCGAAACGGCGGA
ACACGGATTCCTGCGCAATATCACGTTTCAGGGTATTCGCGCCACCGTGGTCGCCGAAGGCAAGCAATACGATGACATGG
CTTTCAAGCAGAACTACCGTCCGGGTGAAACTCGCCAATGCATCGTTTTCAATGCGATTGGCGACGCGTTCATGGACGGC
ATCGCGCTGAACGACGTCCAGATCACCTACGATGGCGGAGGGACGGCCGAGGAGGCGCGCCGGGAAGTCCCGCAGGTGGC
CGGCGAATACTTCGAGATCGGCACGCCGCCGGCATTCGGGCTGTTTGCGCGGAACGTTCGCGGCCTTACGCTCAACGGTG
TTCGCTTCGGAACACAGCAGCCCGATTTGCGGCCGGCGGTCGTCCTCGATCACGTCAGCGATGCCTCATTGAACGCCGTG
AGCGCGCCGGGCAACGACCGGGCCAGCTCGCTATTTCGCTTCGTCGCAGTACAGGACGCTACGGTCATCAGCCCTCGCCT
GCTCGCGCCCACGCCCATCTTTCTACGAGTGGAAGGTGCTGAGAGCCGCGGCATCAGGGTGGAAGGCGGCGACCTTTCCA
AAGCGGCAACTCCCGTGGCATTTGGCGCAGGGGCACTGTCCACTGCCGCCACCGTACGCTGA

Upstream 100 bases:

>100_bases
CTGACCGCTGCAAGACCGTTCCCTCAGTCACGGTCGCGGCTCCGATTCAACCGCGACCGTGAGAGAGGGAGAAAGAACTA
CCGGCGACGGTTGACAGACA

Downstream 100 bases:

>100_bases
CATTGAGCCCGATCGGTGCGAAGCGGAACGAGTGGAACGGAGCAGGGTAAGCTCTGATTGGAGCGTGACCAGCCATCTTC
GTCGTTCCCGCCTCACCTTC

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Exo-PG [H]

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MKLPGNSITRRRCFGWLAAAPLASQMLSAAPQSADSKTAGIRVHNILDYGAKGDGTTLDTEALQAAIDACTADRGGTVLV
PAGVFVIGTVEMKSNVTLRIAAQGKLLGSADGKQYSAAAGIPLHGDSTLEDGNVGLIFAVNAENITVEGPGTIDGQGAQF
RSPSRGVLPPSGRGGADRPYHLLFHRCRNLRIRNLSLVACAFHSIRVIQSSSVWMENLRIHNRVNSNNDGFHFISSEFVH
VSNCDVQTQDDACALFGTCRYVTVTNCTFSTRWSVFRFGGGNPQDITISNCIIYQTYGCPIKLHFGPDSQVENLMFSNLA
MHDVTGPISINLDNHRRRGMAAPETAEHGFLRNITFQGIRATVVAEGKQYDDMAFKQNYRPGETRQCIVFNAIGDAFMDG
IALNDVQITYDGGGTAEEARREVPQVAGEYFEIGTPPAFGLFARNVRGLTLNGVRFGTQQPDLRPAVVLDHVSDASLNAV
SAPGNDRASSLFRFVAVQDATVISPRLLAPTPIFLRVEGAESRGIRVEGGDLSKAATPVAFGAGALSTAATVR

Sequences:

>Translated_553_residues
MKLPGNSITRRRCFGWLAAAPLASQMLSAAPQSADSKTAGIRVHNILDYGAKGDGTTLDTEALQAAIDACTADRGGTVLV
PAGVFVIGTVEMKSNVTLRIAAQGKLLGSADGKQYSAAAGIPLHGDSTLEDGNVGLIFAVNAENITVEGPGTIDGQGAQF
RSPSRGVLPPSGRGGADRPYHLLFHRCRNLRIRNLSLVACAFHSIRVIQSSSVWMENLRIHNRVNSNNDGFHFISSEFVH
VSNCDVQTQDDACALFGTCRYVTVTNCTFSTRWSVFRFGGGNPQDITISNCIIYQTYGCPIKLHFGPDSQVENLMFSNLA
MHDVTGPISINLDNHRRRGMAAPETAEHGFLRNITFQGIRATVVAEGKQYDDMAFKQNYRPGETRQCIVFNAIGDAFMDG
IALNDVQITYDGGGTAEEARREVPQVAGEYFEIGTPPAFGLFARNVRGLTLNGVRFGTQQPDLRPAVVLDHVSDASLNAV
SAPGNDRASSLFRFVAVQDATVISPRLLAPTPIFLRVEGAESRGIRVEGGDLSKAATPVAFGAGALSTAATVR
>Mature_553_residues
MKLPGNSITRRRCFGWLAAAPLASQMLSAAPQSADSKTAGIRVHNILDYGAKGDGTTLDTEALQAAIDACTADRGGTVLV
PAGVFVIGTVEMKSNVTLRIAAQGKLLGSADGKQYSAAAGIPLHGDSTLEDGNVGLIFAVNAENITVEGPGTIDGQGAQF
RSPSRGVLPPSGRGGADRPYHLLFHRCRNLRIRNLSLVACAFHSIRVIQSSSVWMENLRIHNRVNSNNDGFHFISSEFVH
VSNCDVQTQDDACALFGTCRYVTVTNCTFSTRWSVFRFGGGNPQDITISNCIIYQTYGCPIKLHFGPDSQVENLMFSNLA
MHDVTGPISINLDNHRRRGMAAPETAEHGFLRNITFQGIRATVVAEGKQYDDMAFKQNYRPGETRQCIVFNAIGDAFMDG
IALNDVQITYDGGGTAEEARREVPQVAGEYFEIGTPPAFGLFARNVRGLTLNGVRFGTQQPDLRPAVVLDHVSDASLNAV
SAPGNDRASSLFRFVAVQDATVISPRLLAPTPIFLRVEGAESRGIRVEGGDLSKAATPVAFGAGALSTAATVR

Specific function: Contributes significantly to bacterial utilization of polygalacturonate and the induction of pectate lyase in the presence of extracellular pectic polymers [H]

COG id: COG5434

COG function: function code M; Endopolygalacturonase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 PbH1 repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR000743
- InterPro:   IPR013783
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF00041 fn3; PF00295 Glyco_hydro_28 [H]

EC number: =3.2.1.82 [H]

Molecular weight: Translated: 59204; Mature: 59204

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPGNSITRRRCFGWLAAAPLASQMLSAAPQSADSKTAGIRVHNILDYGAKGDGTTLDT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCEECH
EALQAAIDACTADRGGTVLVPAGVFVIGTVEMKSNVTLRIAAQGKLLGSADGKQYSAAAG
HHHHHHHHHHCCCCCCEEEEECCEEEEEEEEECCCEEEEEEECCCEEECCCCCCEEEECC
IPLHGDSTLEDGNVGLIFAVNAENITVEGPGTIDGQGAQFRSPSRGVLPPSGRGGADRPY
CCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
HLLFHRCRNLRIRNLSLVACAFHSIRVIQSSSVWMENLRIHNRVNSNNDGFHFISSEFVH
HHHHHHHHCCEECCEEEEEEHHHEEEEEECCCHHHHHHEEEECCCCCCCCEEEECCCEEE
VSNCDVQTQDDACALFGTCRYVTVTNCTFSTRWSVFRFGGGNPQDITISNCIIYQTYGCP
EECCCCCCCCCCEEEEEEEEEEEEECCEEECCCEEEEECCCCCCEEEEEEEEEEEECCCE
IKLHFGPDSQVENLMFSNLAMHDVTGPISINLDNHRRRGMAAPETAEHGFLRNITFQGIR
EEEEECCCHHHHHHHHHCEEHCCCCCCEEEEECCCHHCCCCCCCCCCCCEEEEEEECCEE
ATVVAEGKQYDDMAFKQNYRPGETRQCIVFNAIGDAFMDGIALNDVQITYDGGGTAEEAR
EEEEECCCCCCCHHHHCCCCCCCCCEEEEEECCCHHHHCCEEECEEEEEECCCCCHHHHH
REVPQVAGEYFEIGTPPAFGLFARNVRGLTLNGVRFGTQQPDLRPAVVLDHVSDASLNAV
HHHHHHCCCCEECCCCCCHHHHHCCCCCEEEECEEECCCCCCCCCEEEEECCCCCCCEEE
SAPGNDRASSLFRFVAVQDATVISPRLLAPTPIFLRVEGAESRGIRVEGGDLSKAATPVA
CCCCCHHHHHHEEEEEECCCEEECCEEECCCCEEEEEECCCCCCEEEECCCCCCCCCCEE
FGAGALSTAATVR
ECCCCCCHHCCCC
>Mature Secondary Structure
MKLPGNSITRRRCFGWLAAAPLASQMLSAAPQSADSKTAGIRVHNILDYGAKGDGTTLDT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCEECH
EALQAAIDACTADRGGTVLVPAGVFVIGTVEMKSNVTLRIAAQGKLLGSADGKQYSAAAG
HHHHHHHHHHCCCCCCEEEEECCEEEEEEEEECCCEEEEEEECCCEEECCCCCCEEEECC
IPLHGDSTLEDGNVGLIFAVNAENITVEGPGTIDGQGAQFRSPSRGVLPPSGRGGADRPY
CCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
HLLFHRCRNLRIRNLSLVACAFHSIRVIQSSSVWMENLRIHNRVNSNNDGFHFISSEFVH
HHHHHHHHCCEECCEEEEEEHHHEEEEEECCCHHHHHHEEEECCCCCCCCEEEECCCEEE
VSNCDVQTQDDACALFGTCRYVTVTNCTFSTRWSVFRFGGGNPQDITISNCIIYQTYGCP
EECCCCCCCCCCEEEEEEEEEEEEECCEEECCCEEEEECCCCCCEEEEEEEEEEEECCCE
IKLHFGPDSQVENLMFSNLAMHDVTGPISINLDNHRRRGMAAPETAEHGFLRNITFQGIR
EEEEECCCHHHHHHHHHCEEHCCCCCCEEEEECCCHHCCCCCCCCCCCCEEEEEEECCEE
ATVVAEGKQYDDMAFKQNYRPGETRQCIVFNAIGDAFMDGIALNDVQITYDGGGTAEEAR
EEEEECCCCCCCHHHHCCCCCCCCCEEEEEECCCHHHHCCEEECEEEEEECCCCCHHHHH
REVPQVAGEYFEIGTPPAFGLFARNVRGLTLNGVRFGTQQPDLRPAVVLDHVSDASLNAV
HHHHHHCCCCEECCCCCCHHHHHCCCCCEEEECEEECCCCCCCCCEEEEECCCCCCCEEE
SAPGNDRASSLFRFVAVQDATVISPRLLAPTPIFLRVEGAESRGIRVEGGDLSKAATPVA
CCCCCHHHHHHEEEEEECCCEEECCEEECCCCEEEEEECCCCCCEEEECCCCCCCCCCEE
FGAGALSTAATVR
ECCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2168372; 1409594 [H]