| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625907
Identifier: 116625907
GI number: 116625907
Start: 8615424
End: 8616113
Strand: Direct
Name: 116625907
Synonym: Acid_6863
Alternate gene names: NA
Gene position: 8615424-8616113 (Clockwise)
Preceding gene: 116625906
Following gene: 116625913
Centisome position: 86.45
GC content: 53.04
Gene sequence:
>690_bases ATGACAACTGAACTAGGTTTTTTTGACGTTGTTGACCAATCGCTCCAGATTTCCGTCTATGGAAAGACTGCTGTCGGTAT TTCAATCGATAAAAGCGCGGCACAGTCAGCCTTTGCGCAACCGTATGCCCAAACCGGAATCGTCTTTGCGTGGATATACG GCTTCGGCTTCATGGGCACCTGTACAAAGCTGGCGAAGCCAGCGCTCGTTGTCCTACCAAATAGCGCCCAGGATCCGAAG GGCTGCAGTGAATTTGCGGATCCGAAGCAGTATCGGATGTGGACGTTACCCAAAGATAGTGTGATCACCGCTCTCGACCA AAAGGTAGGCACAGTCGAAGGCCTTGTGATCCGACCCTTCTTGGACATCCAGTCCGACTTCCGAATCCACGACGTAACAT TCGACGGGACGACTCTCCGCGGCAAAGTGAGGGCTTACCTTCACCTCCACCAGTCTGGGCCCTTTGGCACTACCATCTTC GACATCACCGTGGTCGATCGCGATGATTCTTTCTCGTTCAGTCTAGTTCCCGATCTGTGCATTACCGTTTTCTCGATCGG AGTCGCAAGCGCTCAGGTGTGCTACCACGACAATCCTCGCCGCGTTTGCGGTGAAGTTCAGGTCGGTATCGACCTGCCTG TGATCGGACATTGGGGCCAGAACTTCCCTCTGATCTGCGTTAATTTCTGA
Upstream 100 bases:
>100_bases CGCTTGGGCGCTCCGTCTTCCTGTTTGAGAGCTGAGACGCTTAGCTCTCAAGCTGAGATCCGATTTTATATCAGGATCCG GCCAGAAAGGATTACAAGAG
Downstream 100 bases:
>100_bases CGAGATCGTCCTCGATTGATGTAACTTCGCTGGCAGCGAGGATTCTTTAACGCTGCCAGCACCCAAGGAGCAGCACAGGT GTGTACCTGCAACAGACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MTTELGFFDVVDQSLQISVYGKTAVGISIDKSAAQSAFAQPYAQTGIVFAWIYGFGFMGTCTKLAKPALVVLPNSAQDPK GCSEFADPKQYRMWTLPKDSVITALDQKVGTVEGLVIRPFLDIQSDFRIHDVTFDGTTLRGKVRAYLHLHQSGPFGTTIF DITVVDRDDSFSFSLVPDLCITVFSIGVASAQVCYHDNPRRVCGEVQVGIDLPVIGHWGQNFPLICVNF
Sequences:
>Translated_229_residues MTTELGFFDVVDQSLQISVYGKTAVGISIDKSAAQSAFAQPYAQTGIVFAWIYGFGFMGTCTKLAKPALVVLPNSAQDPK GCSEFADPKQYRMWTLPKDSVITALDQKVGTVEGLVIRPFLDIQSDFRIHDVTFDGTTLRGKVRAYLHLHQSGPFGTTIF DITVVDRDDSFSFSLVPDLCITVFSIGVASAQVCYHDNPRRVCGEVQVGIDLPVIGHWGQNFPLICVNF >Mature_228_residues TTELGFFDVVDQSLQISVYGKTAVGISIDKSAAQSAFAQPYAQTGIVFAWIYGFGFMGTCTKLAKPALVVLPNSAQDPKG CSEFADPKQYRMWTLPKDSVITALDQKVGTVEGLVIRPFLDIQSDFRIHDVTFDGTTLRGKVRAYLHLHQSGPFGTTIFD ITVVDRDDSFSFSLVPDLCITVFSIGVASAQVCYHDNPRRVCGEVQVGIDLPVIGHWGQNFPLICVNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25109; Mature: 24978
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTELGFFDVVDQSLQISVYGKTAVGISIDKSAAQSAFAQPYAQTGIVFAWIYGFGFMGT CCCCCCHHHHCCCCEEEEEEECEEEEEEECHHHHHHHHHCCHHHCCCEEEEEHHCCCHHH CTKLAKPALVVLPNSAQDPKGCSEFADPKQYRMWTLPKDSVITALDQKVGTVEGLVIRPF HHHHCCCEEEEECCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEE LDIQSDFRIHDVTFDGTTLRGKVRAYLHLHQSGPFGTTIFDITVVDRDDSFSFSLVPDLC ECCCCCCEEEEEEECCCEEEEEEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEHHHHH ITVFSIGVASAQVCYHDNPRRVCGEVQVGIDLPVIGHWGQNFPLICVNF HHHHHHCCCEEEEEEECCCHHEECEEEECEECEEECCCCCCCCEEEEEC >Mature Secondary Structure TTELGFFDVVDQSLQISVYGKTAVGISIDKSAAQSAFAQPYAQTGIVFAWIYGFGFMGT CCCCCHHHHCCCCEEEEEEECEEEEEEECHHHHHHHHHCCHHHCCCEEEEEHHCCCHHH CTKLAKPALVVLPNSAQDPKGCSEFADPKQYRMWTLPKDSVITALDQKVGTVEGLVIRPF HHHHCCCEEEEECCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEE LDIQSDFRIHDVTFDGTTLRGKVRAYLHLHQSGPFGTTIFDITVVDRDDSFSFSLVPDLC ECCCCCCEEEEEEECCCEEEEEEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEHHHHH ITVFSIGVASAQVCYHDNPRRVCGEVQVGIDLPVIGHWGQNFPLICVNF HHHHHHCCCEEEEEEECCCHHEECEEEECEECEEECCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA