Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116625913

Identifier: 116625913

GI number: 116625913

Start: 8627055

End: 8628293

Strand: Direct

Name: 116625913

Synonym: Acid_6870

Alternate gene names: NA

Gene position: 8627055-8628293 (Clockwise)

Preceding gene: 116625907

Following gene: 116625914

Centisome position: 86.57

GC content: 62.95

Gene sequence:

>1239_bases
GTGCTAGGCCACGTGCAAGACGGTTCCGTGTCCGCTGACCTCGTCCAGCAGCAGGTGGACAAAATTCTGCGCAGCGGCGC
ATTCAGCGGATCCGAAGTCCTGCGCAACCTCCTTTCCTTCCTGACCCGGCAATCCATTGAAAGGCCCGGCGAGCTAGTCA
AGGAGTACGAGTTGGCCGTAGCGGTACTGGGGAAAGCCGAAGGTTTCGACCCACGGTTAGATTCCGCCGTGCGCGTGCAT
GCGGCCCGCCTGCGCTCCAAACTGGCCGAATACTACATGTCGGAAGGCGCCGACGACGTCCTGTTGATCGAAGTGCCCAA
GGGCTCTTACCACATGGCGTGGCGCTACCGCTGCGGCGAGCCGCCGGCACAGCCGAAGGCGCTGGTGGAAGCGCCGGTGC
AGGCGCCGGAAGTCTCTCGCAGGAAATGGTTTGCCGTGGGCTTTGCCACCGCTGCCGTGCTCGGTTGCGCCATCCTGGGA
ATCTGGCTCCCGGCGCGCGTACCAGCGATTCCCCCGGCCGTCGAAGCGTTCTGGCAACCCCTTATTCACTCGGCCCATCC
ACCGCTCATCGTGTTTTCCAATCACCGGTTTGTCGGAACTTCCGTGACCGGGCTGCGCTATTTCCGCGAGGGGGTCGATT
CGCCTGCCGACAGCAACGATACGTACTCCGGCACCGGCACGGTGATGGCCGTGGCGGAGCTGAGCAATCTGTTCGCTCTC
TTCGGTCATCCGCCGCGATTGAAGCGCGCGGAACTGCTGACCTGGGATGAGGTTAAGGAAGCTAACGTAGTGTTCGTGGG
GGCTCCGGACGCGAACTCGCGGTTGGGGGAGTTGGCGCCTCTGCAGCACTTCAAGTTCAAATCGTCGCACGACGAACCGC
GGTACGGCATCGGTGGTATTGTCAATCTGCATCCGGCGGCCGGGGAAGAGGCGATCTATTTCGGTCCGGTGCGGCCTTAC
GTTTTCGACTACGCCATCATCGCGCTGCTGCCCAACCTGCATCCCGAACGCAAAGTGCTCATTCTGGCCGGCACGAACAC
GTACGGCTGCCAGGCGGCCGCCGAGTTTCTCACGCGCACCGATCTGCTGGGGGAATTGTACCAGCGGCTGGGAGTGGCCA
AGGGCGGAAAGCTGCCCGATTTCGAAGCGTTGTTGAAAGTGGGTGTCAGCGGCGGCGTACCCATGAAGGCCGAGGTGGTT
TTGGTGCGGCGGCACCAGCCCACTGCCCCCAAGCCGTAG

Upstream 100 bases:

>100_bases
CAGCACCAATAGGCTGAGGCAGGTTGTAACTTGCGTATGAAACCGTGTTTAACATACCATTGGCTTGTATCTCGCGCTAG
GAAGTCCGGAGGGTTGGAAG

Downstream 100 bases:

>100_bases
CCCCGAGTAACTTCCCCAATCTTTCCAGCAAGTTAAGCTCACGTTAATAACGGTTGCAACGTCAGCTTCAACTTGACGCC
AGGGGCGATTGAGCCAACTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MLGHVQDGSVSADLVQQQVDKILRSGAFSGSEVLRNLLSFLTRQSIERPGELVKEYELAVAVLGKAEGFDPRLDSAVRVH
AARLRSKLAEYYMSEGADDVLLIEVPKGSYHMAWRYRCGEPPAQPKALVEAPVQAPEVSRRKWFAVGFATAAVLGCAILG
IWLPARVPAIPPAVEAFWQPLIHSAHPPLIVFSNHRFVGTSVTGLRYFREGVDSPADSNDTYSGTGTVMAVAELSNLFAL
FGHPPRLKRAELLTWDEVKEANVVFVGAPDANSRLGELAPLQHFKFKSSHDEPRYGIGGIVNLHPAAGEEAIYFGPVRPY
VFDYAIIALLPNLHPERKVLILAGTNTYGCQAAAEFLTRTDLLGELYQRLGVAKGGKLPDFEALLKVGVSGGVPMKAEVV
LVRRHQPTAPKP

Sequences:

>Translated_412_residues
MLGHVQDGSVSADLVQQQVDKILRSGAFSGSEVLRNLLSFLTRQSIERPGELVKEYELAVAVLGKAEGFDPRLDSAVRVH
AARLRSKLAEYYMSEGADDVLLIEVPKGSYHMAWRYRCGEPPAQPKALVEAPVQAPEVSRRKWFAVGFATAAVLGCAILG
IWLPARVPAIPPAVEAFWQPLIHSAHPPLIVFSNHRFVGTSVTGLRYFREGVDSPADSNDTYSGTGTVMAVAELSNLFAL
FGHPPRLKRAELLTWDEVKEANVVFVGAPDANSRLGELAPLQHFKFKSSHDEPRYGIGGIVNLHPAAGEEAIYFGPVRPY
VFDYAIIALLPNLHPERKVLILAGTNTYGCQAAAEFLTRTDLLGELYQRLGVAKGGKLPDFEALLKVGVSGGVPMKAEVV
LVRRHQPTAPKP
>Mature_412_residues
MLGHVQDGSVSADLVQQQVDKILRSGAFSGSEVLRNLLSFLTRQSIERPGELVKEYELAVAVLGKAEGFDPRLDSAVRVH
AARLRSKLAEYYMSEGADDVLLIEVPKGSYHMAWRYRCGEPPAQPKALVEAPVQAPEVSRRKWFAVGFATAAVLGCAILG
IWLPARVPAIPPAVEAFWQPLIHSAHPPLIVFSNHRFVGTSVTGLRYFREGVDSPADSNDTYSGTGTVMAVAELSNLFAL
FGHPPRLKRAELLTWDEVKEANVVFVGAPDANSRLGELAPLQHFKFKSSHDEPRYGIGGIVNLHPAAGEEAIYFGPVRPY
VFDYAIIALLPNLHPERKVLILAGTNTYGCQAAAEFLTRTDLLGELYQRLGVAKGGKLPDFEALLKVGVSGGVPMKAEVV
LVRRHQPTAPKP

Specific function: Unknown

COG id: COG5616

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44883; Mature: 44883

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGHVQDGSVSADLVQQQVDKILRSGAFSGSEVLRNLLSFLTRQSIERPGELVKEYELAV
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AVLGKAEGFDPRLDSAVRVHAARLRSKLAEYYMSEGADDVLLIEVPKGSYHMAWRYRCGE
HEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCC
PPAQPKALVEAPVQAPEVSRRKWFAVGFATAAVLGCAILGIWLPARVPAIPPAVEAFWQP
CCCCCHHHHHCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LIHSAHPPLIVFSNHRFVGTSVTGLRYFREGVDSPADSNDTYSGTGTVMAVAELSNLFAL
HHHCCCCCEEEEECCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
FGHPPRLKRAELLTWDEVKEANVVFVGAPDANSRLGELAPLQHFKFKSSHDEPRYGIGGI
HCCCCCCCHHHCCCHHHCCCCCEEEEECCCCCCCHHCCCCHHHHCCCCCCCCCCCCCCCE
VNLHPAAGEEAIYFGPVRPYVFDYAIIALLPNLHPERKVLILAGTNTYGCQAAAEFLTRT
EEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHH
DLLGELYQRLGVAKGGKLPDFEALLKVGVSGGVPMKAEVVLVRRHQPTAPKP
HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MLGHVQDGSVSADLVQQQVDKILRSGAFSGSEVLRNLLSFLTRQSIERPGELVKEYELAV
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AVLGKAEGFDPRLDSAVRVHAARLRSKLAEYYMSEGADDVLLIEVPKGSYHMAWRYRCGE
HEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCC
PPAQPKALVEAPVQAPEVSRRKWFAVGFATAAVLGCAILGIWLPARVPAIPPAVEAFWQP
CCCCCHHHHHCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LIHSAHPPLIVFSNHRFVGTSVTGLRYFREGVDSPADSNDTYSGTGTVMAVAELSNLFAL
HHHCCCCCEEEEECCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
FGHPPRLKRAELLTWDEVKEANVVFVGAPDANSRLGELAPLQHFKFKSSHDEPRYGIGGI
HCCCCCCCHHHCCCHHHCCCCCEEEEECCCCCCCHHCCCCHHHHCCCCCCCCCCCCCCCE
VNLHPAAGEEAIYFGPVRPYVFDYAIIALLPNLHPERKVLILAGTNTYGCQAAAEFLTRT
EEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHH
DLLGELYQRLGVAKGGKLPDFEALLKVGVSGGVPMKAEVVLVRRHQPTAPKP
HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA