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The map label for this gene is 116625904

Identifier: 116625904

GI number: 116625904

Start: 8613003

End: 8613458

Strand: Reverse

Name: 116625904

Synonym: Acid_6860

Alternate gene names: NA

Gene position: 8613458-8613003 (Counterclockwise)

Preceding gene: 116625908

Following gene: 116625903

Centisome position: 86.43

GC content: 54.17

Gene sequence:

>456_bases
ATGGTCCAAGAGACCTTTCTCAAATTGTGCGCAAAAGATTTTGCACTGCTTAGACGCTTTCGGTCTGAACGGCCAGAGGC
ATTACGGGCGTATTTGGCAGCGATTGCTGCAACGGTTGTTTCAGACGACGAGCGGGTGCGCCGCGCGCGCAAACGAGGCG
CTGGCGCCGACACGGTGCCTTTGGACGATTGTGAGCACGCCGGAGCCGAGTTCGGACTTGCCGAGCAGGTAGAGCGCCGG
ATACTTCTTGATCGAGTCGAGAAGTGCATGTCAGAGCAAAAGGACCGGGACAAGCAGGTTTTCTGGCTCTATTATCGTCA
TGGCTTGACCTCGCAGGCAATATCTGAAATTAGGGTCGTCAATCTCAGCTCAAGCGGCGTCGAGAGTCTTCTCCTACGAC
TAGCGACAGCGGTTCGAAGGTGCTTGAGAATCTCCAATGAAAGATTCCACAAATGA

Upstream 100 bases:

>100_bases
ATGGGAGCGGTTTATCCACGAAGCCCACGGAATTGTAGCGTCCGCCGTTTTTCGTTCTCTCTCCCGCTGGGGTCAGCCGC
AGAGGGACCGGGTAGAGGAT

Downstream 100 bases:

>100_bases
CCAAAGGATTTTTGAGATGAAACGCGTCATTCAAGGCAGGTGCTCATTTGTCACCAATTGATCACCTCACGCCGACTCAA
GTGGAGGCCGTCGCACGAGG

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MVQETFLKLCAKDFALLRRFRSERPEALRAYLAAIAATVVSDDERVRRARKRGAGADTVPLDDCEHAGAEFGLAEQVERR
ILLDRVEKCMSEQKDRDKQVFWLYYRHGLTSQAISEIRVVNLSSSGVESLLLRLATAVRRCLRISNERFHK

Sequences:

>Translated_151_residues
MVQETFLKLCAKDFALLRRFRSERPEALRAYLAAIAATVVSDDERVRRARKRGAGADTVPLDDCEHAGAEFGLAEQVERR
ILLDRVEKCMSEQKDRDKQVFWLYYRHGLTSQAISEIRVVNLSSSGVESLLLRLATAVRRCLRISNERFHK
>Mature_151_residues
MVQETFLKLCAKDFALLRRFRSERPEALRAYLAAIAATVVSDDERVRRARKRGAGADTVPLDDCEHAGAEFGLAEQVERR
ILLDRVEKCMSEQKDRDKQVFWLYYRHGLTSQAISEIRVVNLSSSGVESLLLRLATAVRRCLRISNERFHK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17337; Mature: 17337

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQETFLKLCAKDFALLRRFRSERPEALRAYLAAIAATVVSDDERVRRARKRGAGADTVP
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC
LDDCEHAGAEFGLAEQVERRILLDRVEKCMSEQKDRDKQVFWLYYRHGLTSQAISEIRVV
CCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHH
NLSSSGVESLLLRLATAVRRCLRISNERFHK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVQETFLKLCAKDFALLRRFRSERPEALRAYLAAIAATVVSDDERVRRARKRGAGADTVP
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC
LDDCEHAGAEFGLAEQVERRILLDRVEKCMSEQKDRDKQVFWLYYRHGLTSQAISEIRVV
CCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHH
NLSSSGVESLLLRLATAVRRCLRISNERFHK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA