| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625863
Identifier: 116625863
GI number: 116625863
Start: 8548840
End: 8549331
Strand: Direct
Name: 116625863
Synonym: Acid_6817
Alternate gene names: NA
Gene position: 8548840-8549331 (Clockwise)
Preceding gene: 116625861
Following gene: 116625864
Centisome position: 85.78
GC content: 58.54
Gene sequence:
>492_bases ATGCCGACAACAGCCCCGCATTCATTGCACACCAGCTTCACCGTCCCTCCTGCCGCCAAGATTTCGCACAAGAGCGCGGG CGGCGGCATCGAGTGCTGCGGCTACATCGAGGCTAAGGACGATATACTGAGCGGCACCACCACCCTCCGCTGTGACGAAT GCGGCCAAGTGGTGGGAACGATCAAGACGGGCATCCTCAACGATCTGGTGACGCTGGCGATGGCGACGGAGATGGACGAG TTCGTCCCAGACGCAGACCACATCAACGCCCTTCCAGGGCCGCTGCGGAGTACATCCACGATCTGGAAACCTGTGCCGAT CCGGCTGGTGACGTGGCGGAGATTGCCTTGCTCAAAGAGAACAATGCGGCCCTATGGGCGCGTGTCCGCGAACTGGAAGC CCAAGTTCCTCCACAACAAAGTAGACCTTTTTTTGACCGATCTTTATGAGACGTATGGGCGCGACCCGTCACTCAGCTGT TTTACCCTTTAA
Upstream 100 bases:
>100_bases CCTCCCTAAATCCGGGGGAGGTGTTGGAGTTGCCGCAGTGCGGTCAGGCGGCTTTGGCACACTCCAGCCTGAGCAGCGGC GGGAGGATCGCGAGGTCACC
Downstream 100 bases:
>100_bases GCTCTGGGCGGAAGAAGGTCTTCGGGTACTGCTCCGTCAAGCGTGAAATCCCTAAGCCGTTTCAGAGCATCGCTGTATTG CAGAAGGGCCGCATGGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MPTTAPHSLHTSFTVPPAAKISHKSAGGGIECCGYIEAKDDILSGTTTLRCDECGQVVGTIKTGILNDLVTLAMATEMDE FVPDADHINALPGPLRSTSTIWKPVPIRLVTWRRLPCSKRTMRPYGRVSANWKPKFLHNKVDLFLTDLYETYGRDPSLSC FTL
Sequences:
>Translated_163_residues MPTTAPHSLHTSFTVPPAAKISHKSAGGGIECCGYIEAKDDILSGTTTLRCDECGQVVGTIKTGILNDLVTLAMATEMDE FVPDADHINALPGPLRSTSTIWKPVPIRLVTWRRLPCSKRTMRPYGRVSANWKPKFLHNKVDLFLTDLYETYGRDPSLSC FTL >Mature_162_residues PTTAPHSLHTSFTVPPAAKISHKSAGGGIECCGYIEAKDDILSGTTTLRCDECGQVVGTIKTGILNDLVTLAMATEMDEF VPDADHINALPGPLRSTSTIWKPVPIRLVTWRRLPCSKRTMRPYGRVSANWKPKFLHNKVDLFLTDLYETYGRDPSLSCF TL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17964; Mature: 17833
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTAPHSLHTSFTVPPAAKISHKSAGGGIECCGYIEAKDDILSGTTTLRCDECGQVVGT CCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHCCCCEEEHHHHHHHHHH IKTGILNDLVTLAMATEMDEFVPDADHINALPGPLRSTSTIWKPVPIRLVTWRRLPCSKR HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC TMRPYGRVSANWKPKFLHNKVDLFLTDLYETYGRDPSLSCFTL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEC >Mature Secondary Structure PTTAPHSLHTSFTVPPAAKISHKSAGGGIECCGYIEAKDDILSGTTTLRCDECGQVVGT CCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHCCCCEEEHHHHHHHHHH IKTGILNDLVTLAMATEMDEFVPDADHINALPGPLRSTSTIWKPVPIRLVTWRRLPCSKR HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC TMRPYGRVSANWKPKFLHNKVDLFLTDLYETYGRDPSLSCFTL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA