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The map label for this gene is 116625693

Identifier: 116625693

GI number: 116625693

Start: 8330013

End: 8330435

Strand: Reverse

Name: 116625693

Synonym: Acid_6642

Alternate gene names: NA

Gene position: 8330435-8330013 (Counterclockwise)

Preceding gene: 116625694

Following gene: 116625692

Centisome position: 83.59

GC content: 64.54

Gene sequence:

>423_bases
GTGACCTGGCTCGGCTGGTCGCTGGCGTCGGCGGTGTTTGCAGCCCTGACCGCCATTCTGGCGAAGGTCGGAGTCTCCGG
CGTCGATTCCACCCTGGCAACCGCCGTCCGCACCGTCGTCGTCCTTCTTTTCACCTGGCTGCTGGTTTGGGTGAGTCCCT
CGGCCGGAGGAATCGGAACGCTGACTCCCCGCAATTGGAGTTTCCTGGCGCTCTCCGGCGTCACGACGGGGTTGTCCTGG
CTCTGTTACTTTCGGGCCCTGCAGATTGGTCCTGCATCGCGCGTGGCGCCCATCGATAAGCTGAGCGTGGTCTTCGTGAT
TGCGTTGGCGACGCTGGTTTTGGGCGAGCGGCTGACTTGGGCGAAGGGAATCGGCGGGCTGTTGATTGTGGCGGGGGCGG
TGACGATCGCGCTTGAGCGGTAG

Upstream 100 bases:

>100_bases
AGGATCCCAAAGCGGCGGCGAAGGCCTATGCCAAGTATCTCGGCCTCGCCAGCGACGCCAAAAACGCCGATGAAATCCGG
AAAAAGCTGGAAAAGCTGAA

Downstream 100 bases:

>100_bases
TCCGCTGCCACCTGAATTTGCTATACTTGGAGTTCGAAAGTTTACGGGAGATTTCTGTCTTATGGCACAAACTTGTGATT
TATGTGGTCGCGGCCCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF6 [H]

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTWLGWSLASAVFAALTAILAKVGVSGVDSTLATAVRTVVVLLFTWLLVWVSPSAGGIGTLTPRNWSFLALSGVTTGLSW
LCYFRALQIGPASRVAPIDKLSVVFVIALATLVLGERLTWAKGIGGLLIVAGAVTIALER

Sequences:

>Translated_140_residues
MTWLGWSLASAVFAALTAILAKVGVSGVDSTLATAVRTVVVLLFTWLLVWVSPSAGGIGTLTPRNWSFLALSGVTTGLSW
LCYFRALQIGPASRVAPIDKLSVVFVIALATLVLGERLTWAKGIGGLLIVAGAVTIALER
>Mature_139_residues
TWLGWSLASAVFAALTAILAKVGVSGVDSTLATAVRTVVVLLFTWLLVWVSPSAGGIGTLTPRNWSFLALSGVTTGLSWL
CYFRALQIGPASRVAPIDKLSVVFVIALATLVLGERLTWAKGIGGLLIVAGAVTIALER

Specific function: Unknown

COG id: COG2510

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 14610; Mature: 14478

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWLGWSLASAVFAALTAILAKVGVSGVDSTLATAVRTVVVLLFTWLLVWVSPSAGGIGT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LTPRNWSFLALSGVTTGLSWLCYFRALQIGPASRVAPIDKLSVVFVIALATLVLGERLTW
CCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH
AKGIGGLLIVAGAVTIALER
HHCCCHHHHHHHHHHHEECC
>Mature Secondary Structure 
TWLGWSLASAVFAALTAILAKVGVSGVDSTLATAVRTVVVLLFTWLLVWVSPSAGGIGT
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LTPRNWSFLALSGVTTGLSWLCYFRALQIGPASRVAPIDKLSVVFVIALATLVLGERLTW
CCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH
AKGIGGLLIVAGAVTIALER
HHCCCHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655697 [H]