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The map label for this gene is 116625688

Identifier: 116625688

GI number: 116625688

Start: 8325284

End: 8326012

Strand: Reverse

Name: 116625688

Synonym: Acid_6637

Alternate gene names: NA

Gene position: 8326012-8325284 (Counterclockwise)

Preceding gene: 116625692

Following gene: 116625687

Centisome position: 83.55

GC content: 63.24

Gene sequence:

>729_bases
ATGGAAGACAAGAAGACAGTTCTCGTAGTCAGCGCGCATGCCGCCGACTTCGTTTGGCGCGCCGGCGGCACCATCGCGGT
CTATGCCGAACGCGGCTATCGCGTGCGGATCCTCTGCCTCTCCTACGGCGAACGCGGCGAATCCGAGCGCCTCTGGAAGA
TCGATGGCATGACCGTGGAGCGCGTCAAGGAAGATCGCCACGACGAAGCCTTCCGCGCCGCCGAAATTCTAGGAGCGGAG
ATCCGCTTCTTCGACATGAGCGACTATCCGATCGTTCCCACGCCCGAGAAGATCGCCGCAATGGTGGACGAATTTCGCGA
GTGCAAACCGGAGATAGTCCTCACTCACAGCTACGAAGACCCCTACAATCCCGACCATCCGATGGCGAACGACCTGACCC
TGAAGACGCGCGTCTACGCGCAGGCCGCCGGCTACCCCGCCAAGGGCAAGGGTCGCCAGGACGACGCGCCGCCGGTCTTC
CTCTTTGAGCCCCACCAGCCCGAGATGTGCAATTTCAAGCCCCAGGTGCTGATCGATGTCACCCCGGTGTGGGAGAAGAA
ACGCCAGGCGATGGAATCCATGGCCGCCCAGGAGCATCTCGTCCACTACTACACCGACCTCGGTAAACGGCGCGGCGTAC
AGGCGGTGCGCAACTCGGGGCGCCGCGGCATTCGCTACGCCGAGGCCTACCAGCGCGTCTACCCGCAGGTAACGGACACG
CTCGCATGA

Upstream 100 bases:

>100_bases
CGGGCCGCCGCGTGGGGCCGCTGCTTGATTCTACAAATTTTCCCGCCCTGCCGATTGCCGCTACAATCAGAGGCGGCTCC
AACCAGGCCGTAACCTAACC

Downstream 100 bases:

>100_bases
AGCCCACAATCAGGCGCCGCATCGAACGTCCCGACGCCGCCGTGGTGCGCCTGCTCGGCGAATTGGGAGTGGCCACCGTC
CACGAGTCGCAAGGCCGCGG

Product: LmbE family protein

Products: NA

Alternate protein names: LmbE-Like Protein; N-Acetylglucosaminylphosphatidylinositol De-N-Acetylase; LmbE-Related Protein; Proteins LmbE Homolog; GlcNAc-PI De-N-Acetylase

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MEDKKTVLVVSAHAADFVWRAGGTIAVYAERGYRVRILCLSYGERGESERLWKIDGMTVERVKEDRHDEAFRAAEILGAE
IRFFDMSDYPIVPTPEKIAAMVDEFRECKPEIVLTHSYEDPYNPDHPMANDLTLKTRVYAQAAGYPAKGKGRQDDAPPVF
LFEPHQPEMCNFKPQVLIDVTPVWEKKRQAMESMAAQEHLVHYYTDLGKRRGVQAVRNSGRRGIRYAEAYQRVYPQVTDT
LA

Sequences:

>Translated_242_residues
MEDKKTVLVVSAHAADFVWRAGGTIAVYAERGYRVRILCLSYGERGESERLWKIDGMTVERVKEDRHDEAFRAAEILGAE
IRFFDMSDYPIVPTPEKIAAMVDEFRECKPEIVLTHSYEDPYNPDHPMANDLTLKTRVYAQAAGYPAKGKGRQDDAPPVF
LFEPHQPEMCNFKPQVLIDVTPVWEKKRQAMESMAAQEHLVHYYTDLGKRRGVQAVRNSGRRGIRYAEAYQRVYPQVTDT
LA
>Mature_242_residues
MEDKKTVLVVSAHAADFVWRAGGTIAVYAERGYRVRILCLSYGERGESERLWKIDGMTVERVKEDRHDEAFRAAEILGAE
IRFFDMSDYPIVPTPEKIAAMVDEFRECKPEIVLTHSYEDPYNPDHPMANDLTLKTRVYAQAAGYPAKGKGRQDDAPPVF
LFEPHQPEMCNFKPQVLIDVTPVWEKKRQAMESMAAQEHLVHYYTDLGKRRGVQAVRNSGRRGIRYAEAYQRVYPQVTDT
LA

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27742; Mature: 27742

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDKKTVLVVSAHAADFVWRAGGTIAVYAERGYRVRILCLSYGERGESERLWKIDGMTVE
CCCCEEEEEEEECCHHEEEECCCEEEEEECCCCEEEEEEEECCCCCCCCCEEEECCCCHH
RVKEDRHDEAFRAAEILGAEIRFFDMSDYPIVPTPEKIAAMVDEFRECKPEIVLTHSYED
HHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCC
PYNPDHPMANDLTLKTRVYAQAAGYPAKGKGRQDDAPPVFLFEPHQPEMCNFKPQVLIDV
CCCCCCCCCCCEEEEHEEEEHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEE
TPVWEKKRQAMESMAAQEHLVHYYTDLGKRRGVQAVRNSGRRGIRYAEAYQRVYPQVTDT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LA
CC
>Mature Secondary Structure
MEDKKTVLVVSAHAADFVWRAGGTIAVYAERGYRVRILCLSYGERGESERLWKIDGMTVE
CCCCEEEEEEEECCHHEEEECCCEEEEEECCCCEEEEEEEECCCCCCCCCEEEECCCCHH
RVKEDRHDEAFRAAEILGAEIRFFDMSDYPIVPTPEKIAAMVDEFRECKPEIVLTHSYED
HHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCC
PYNPDHPMANDLTLKTRVYAQAAGYPAKGKGRQDDAPPVFLFEPHQPEMCNFKPQVLIDV
CCCCCCCCCCCEEEEHEEEEHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEE
TPVWEKKRQAMESMAAQEHLVHYYTDLGKRRGVQAVRNSGRRGIRYAEAYQRVYPQVTDT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA