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The map label for this gene is 116625679

Identifier: 116625679

GI number: 116625679

Start: 8316407

End: 8317861

Strand: Direct

Name: 116625679

Synonym: Acid_6628

Alternate gene names: NA

Gene position: 8316407-8317861 (Clockwise)

Preceding gene: 116625678

Following gene: 116625680

Centisome position: 83.45

GC content: 63.16

Gene sequence:

>1455_bases
ATGATCATTCTCTTTCATCCGCGCAGCACGAAGCCGAAAAACCGGCGGCTGCCGCTTTCCGTGCTGTATCTGGGCGCGGT
GCTGGAAGGACGTGAAGACTACGAGATTGTGGACGGCAACGCCGACCCCGATCCGATGGCGACCATCGACGCGCTGATGC
GGCAGCACAAAGTCGAGTTGCTCGGCGTCTCGGTGATGCCGGGTCCGCAATTGCGGCAAGCCGTCGCGGTGAGCAAGGCC
GTGCGCGAAAAATATCCGCGAGTGCCGATTGCGTGGGGCGGCTACTTCGCGTCGCTCTATACCGAGGCGTCGCTCAATGC
GCGGTACGTGGATTTCGTGGTGAAGGGGCAGGGTGAGGATACACTGCTGGAATTGCTCGCCGCGCTGCGGGGACCGCGCA
ATTTCCAGGATGTTCGTGGGATGTCATTTAAGGACCAGTTCGGGCTGCATGTGCATACCGCGGAGCGGCCGCTGAAAGCG
CCGGACGATTTCCCATGGCCGCCGTATCACCGGCTGGACCCCGCGAAGTATATCGCGCGCACTTTTCTGGGAACGCGCAC
GGCGGTTCACCAGGCGAGCATCGGCTGCCCTTTCCGCTGCAATTTCTGCGGCGTGGTGCCGGTGTACGACCGCGAGAAGA
TGGAGCCGGCGGCGCGCACCGCCTCGATCCTCAGATATCTGCAGGCGCAGTACGGCGTCAACGCGGTGCAGTTTTACGAC
AACAACTTCTTTCTGCGTGAGGAGCATGCGCGCGAACTGGCCGAGCGGATCGCGCCGCTGAACCTGCGGTGGTGGTGCGA
AGCGCGCGTGGATATCGTGCTGGGCTACTCCGACGATACGCTGCGCAAGCTGCGCGAGGCGGGCTGCGTCATGATTTTCT
TCGGTGTGGAATCGGGCAATGACGTGGCGCTGCGGAATATGAAGAAGCAGCTCACTTCAGAGCAGACGCTGGAGTTGGCG
CGGCGCATCCGGGAGTTCGACATCGTGCCCGAATACTCCATGATCTTCGGTAATCCGGCGGACGCGGAGCGCGACCTGGA
GGCGAACATCGCGTTCGTGCGCCGCGTGAAAAAGGTCAACCCGGCGGTGGAGATTGTGGTGCAGACGTACGTCCCCACGC
CGCAACGGAACGGCGTGTGGGGTGATGTGGACGTGCGGTTTCCCGCGTCGCCCGACGAGTGGCTCACGGATCGCTGGTAT
CCCTACCTGATTCGCACCGACCCGAAACTGCCGTGGCTGCCGGACCACGTGAAGCGCCGCATCCGGAATTTCGAGACGGT
GATGAATTCACGTTGGCCCACGACCCAGGACATGCGGCTTCCCGGTTGGGGCCGCACGCTGCTGAAATCGCTGAGCAGCT
GGCGCTACGCGGTGGGCGCGTATGATTTTCCCGGGGAATTGCGGCTGGCGCAGCGCCTGGTAAGGCTGCGGCAGCCGAGG
CTGGAGAGCCTCTGA

Upstream 100 bases:

>100_bases
CGTGGTACGGCTGGCAGTGGGCCATGCGGCCATGGAAGGCGCGCTGGCGCGGGAAGCGTCCGCCGAGCAATTTCTGGATT
CTGGCAGGCAGGTTCCACGC

Downstream 100 bases:

>100_bases
TGTCTGCGATCCGCGTATCGGCGCGCGAGGGCTACGGCCTTTGGGCCGAGAGCTGGGACAGCACGCCCTCGCCGATCGTA
GCGTTAGAACACCGGATGCT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MIILFHPRSTKPKNRRLPLSVLYLGAVLEGREDYEIVDGNADPDPMATIDALMRQHKVELLGVSVMPGPQLRQAVAVSKA
VREKYPRVPIAWGGYFASLYTEASLNARYVDFVVKGQGEDTLLELLAALRGPRNFQDVRGMSFKDQFGLHVHTAERPLKA
PDDFPWPPYHRLDPAKYIARTFLGTRTAVHQASIGCPFRCNFCGVVPVYDREKMEPAARTASILRYLQAQYGVNAVQFYD
NNFFLREEHARELAERIAPLNLRWWCEARVDIVLGYSDDTLRKLREAGCVMIFFGVESGNDVALRNMKKQLTSEQTLELA
RRIREFDIVPEYSMIFGNPADAERDLEANIAFVRRVKKVNPAVEIVVQTYVPTPQRNGVWGDVDVRFPASPDEWLTDRWY
PYLIRTDPKLPWLPDHVKRRIRNFETVMNSRWPTTQDMRLPGWGRTLLKSLSSWRYAVGAYDFPGELRLAQRLVRLRQPR
LESL

Sequences:

>Translated_484_residues
MIILFHPRSTKPKNRRLPLSVLYLGAVLEGREDYEIVDGNADPDPMATIDALMRQHKVELLGVSVMPGPQLRQAVAVSKA
VREKYPRVPIAWGGYFASLYTEASLNARYVDFVVKGQGEDTLLELLAALRGPRNFQDVRGMSFKDQFGLHVHTAERPLKA
PDDFPWPPYHRLDPAKYIARTFLGTRTAVHQASIGCPFRCNFCGVVPVYDREKMEPAARTASILRYLQAQYGVNAVQFYD
NNFFLREEHARELAERIAPLNLRWWCEARVDIVLGYSDDTLRKLREAGCVMIFFGVESGNDVALRNMKKQLTSEQTLELA
RRIREFDIVPEYSMIFGNPADAERDLEANIAFVRRVKKVNPAVEIVVQTYVPTPQRNGVWGDVDVRFPASPDEWLTDRWY
PYLIRTDPKLPWLPDHVKRRIRNFETVMNSRWPTTQDMRLPGWGRTLLKSLSSWRYAVGAYDFPGELRLAQRLVRLRQPR
LESL
>Mature_484_residues
MIILFHPRSTKPKNRRLPLSVLYLGAVLEGREDYEIVDGNADPDPMATIDALMRQHKVELLGVSVMPGPQLRQAVAVSKA
VREKYPRVPIAWGGYFASLYTEASLNARYVDFVVKGQGEDTLLELLAALRGPRNFQDVRGMSFKDQFGLHVHTAERPLKA
PDDFPWPPYHRLDPAKYIARTFLGTRTAVHQASIGCPFRCNFCGVVPVYDREKMEPAARTASILRYLQAQYGVNAVQFYD
NNFFLREEHARELAERIAPLNLRWWCEARVDIVLGYSDDTLRKLREAGCVMIFFGVESGNDVALRNMKKQLTSEQTLELA
RRIREFDIVPEYSMIFGNPADAERDLEANIAFVRRVKKVNPAVEIVVQTYVPTPQRNGVWGDVDVRFPASPDEWLTDRWY
PYLIRTDPKLPWLPDHVKRRIRNFETVMNSRWPTTQDMRLPGWGRTLLKSLSSWRYAVGAYDFPGELRLAQRLVRLRQPR
LESL

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 55736; Mature: 55736

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILFHPRSTKPKNRRLPLSVLYLGAVLEGREDYEIVDGNADPDPMATIDALMRQHKVEL
CEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCEEE
LGVSVMPGPQLRQAVAVSKAVREKYPRVPIAWGGYFASLYTEASLNARYVDFVVKGQGED
EEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCEEEEEEEECCCHH
TLLELLAALRGPRNFQDVRGMSFKDQFGLHVHTAERPLKAPDDFPWPPYHRLDPAKYIAR
HHHHHHHHHCCCCCHHHHCCCCCCHHCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
TFLGTRTAVHQASIGCPFRCNFCGVVPVYDREKMEPAARTASILRYLQAQYGVNAVQFYD
HHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCEEEEEC
NNFFLREEHARELAERIAPLNLRWWCEARVDIVLGYSDDTLRKLREAGCVMIFFGVESGN
CCEEECHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCHHHHHHHHCCEEEEEEECCCCC
DVALRNMKKQLTSEQTLELARRIREFDIVPEYSMIFGNPADAERDLEANIAFVRRVKKVN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCHHHHHHHHHHHHHCC
PAVEIVVQTYVPTPQRNGVWGDVDVRFPASPDEWLTDRWYPYLIRTDPKLPWLPDHVKRR
HHHEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHCCCCCEEEEEECCCCCCCHHHHHHH
IRNFETVMNSRWPTTQDMRLPGWGRTLLKSLSSWRYAVGAYDFPGELRLAQRLVRLRQPR
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHCCCC
LESL
CCCC
>Mature Secondary Structure
MIILFHPRSTKPKNRRLPLSVLYLGAVLEGREDYEIVDGNADPDPMATIDALMRQHKVEL
CEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCEEE
LGVSVMPGPQLRQAVAVSKAVREKYPRVPIAWGGYFASLYTEASLNARYVDFVVKGQGED
EEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCEEEEEEEECCCHH
TLLELLAALRGPRNFQDVRGMSFKDQFGLHVHTAERPLKAPDDFPWPPYHRLDPAKYIAR
HHHHHHHHHCCCCCHHHHCCCCCCHHCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
TFLGTRTAVHQASIGCPFRCNFCGVVPVYDREKMEPAARTASILRYLQAQYGVNAVQFYD
HHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCEEEEEC
NNFFLREEHARELAERIAPLNLRWWCEARVDIVLGYSDDTLRKLREAGCVMIFFGVESGN
CCEEECHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCHHHHHHHHCCEEEEEEECCCCC
DVALRNMKKQLTSEQTLELARRIREFDIVPEYSMIFGNPADAERDLEANIAFVRRVKKVN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCHHHHHHHHHHHHHCC
PAVEIVVQTYVPTPQRNGVWGDVDVRFPASPDEWLTDRWYPYLIRTDPKLPWLPDHVKRR
HHHEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHCCCCCEEEEEECCCCCCCHHHHHHH
IRNFETVMNSRWPTTQDMRLPGWGRTLLKSLSSWRYAVGAYDFPGELRLAQRLVRLRQPR
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHCCCC
LESL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]