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The map label for this gene is yafE [C]

Identifier: 116625680

GI number: 116625680

Start: 8317861

End: 8318517

Strand: Direct

Name: yafE [C]

Synonym: Acid_6629

Alternate gene names: 116625680

Gene position: 8317861-8318517 (Clockwise)

Preceding gene: 116625679

Following gene: 116625681

Centisome position: 83.47

GC content: 68.04

Gene sequence:

>657_bases
ATGTCTGCGATCCGCGTATCGGCGCGCGAGGGCTACGGCCTTTGGGCCGAGAGCTGGGACAGCACGCCCTCGCCGATCGT
AGCGTTAGAACACCGGATGCTACTGCCGTGGATCGAGCGTGCCGGAGCACGCCGCGCGATCGACGTGGGCTGCGGCACGG
GGCGCTGGACTCAGCATTTGGGCGCCATCGGTCTGGATAGTTCTCGGGAGATGCTTGCCTGTGCGCAGGGGAAGTCCGGG
CTGCGCGGCCGGCTGGCGGTGGCGGACGCGACTGCGCTGCCGGTCGCGGACGGCGCGGCGGATCTGGTGCTGTGCGCGCT
GACGCTCGGACACATTCGCGATCATGGGGCCGCGATGCGGGAGTTCGCGCGCATTCTGGCGCCCGGGGGGACACTGCTGC
TCACCGACTTTCATCCGGCAGCCGCGGCGGCCGGATGGCGCCGGACGTTCCGACGCGAGGGCAGCGTTTACGAAGTGGAG
AACCATCCGTACACAGTCGAACGGCTGCGGTGTGAGGGGTTGGTGCTCGACGAGCGCGTGGATGCGAGGATCGGGGAGCC
CGAGCGCGATCTTTTTCATGCGGCAGGCAGACCCGAACTGTTTGTGGAGGCGTGCGGGATTCCGGCGGTGCTGCTGACGC
GATGGATTCGGGTATGA

Upstream 100 bases:

>100_bases
GCAGCTGGCGCTACGCGGTGGGCGCGTATGATTTTCCCGGGGAATTGCGGCTGGCGCAGCGCCTGGTAAGGCTGCGGCAG
CCGAGGCTGGAGAGCCTCTG

Downstream 100 bases:

>100_bases
AGCTCAATCTCGCCGGGCACATCGTGCTGCCGGGGCTGATCAACGCGCACGACCACCTGGAGTTCAACCTCTTTCCGCAA
TTGGGAAGGGGACCCTACGC

Product: type 11 methyltransferase

Products: NA

Alternate protein names: Biotin Synthesis Protein; ArsR Family Transcriptional Regulator; Amidohydrolase; Methyltransferase

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MSAIRVSAREGYGLWAESWDSTPSPIVALEHRMLLPWIERAGARRAIDVGCGTGRWTQHLGAIGLDSSREMLACAQGKSG
LRGRLAVADATALPVADGAADLVLCALTLGHIRDHGAAMREFARILAPGGTLLLTDFHPAAAAAGWRRTFRREGSVYEVE
NHPYTVERLRCEGLVLDERVDARIGEPERDLFHAAGRPELFVEACGIPAVLLTRWIRV

Sequences:

>Translated_218_residues
MSAIRVSAREGYGLWAESWDSTPSPIVALEHRMLLPWIERAGARRAIDVGCGTGRWTQHLGAIGLDSSREMLACAQGKSG
LRGRLAVADATALPVADGAADLVLCALTLGHIRDHGAAMREFARILAPGGTLLLTDFHPAAAAAGWRRTFRREGSVYEVE
NHPYTVERLRCEGLVLDERVDARIGEPERDLFHAAGRPELFVEACGIPAVLLTRWIRV
>Mature_217_residues
SAIRVSAREGYGLWAESWDSTPSPIVALEHRMLLPWIERAGARRAIDVGCGTGRWTQHLGAIGLDSSREMLACAQGKSGL
RGRLAVADATALPVADGAADLVLCALTLGHIRDHGAAMREFARILAPGGTLLLTDFHPAAAAAGWRRTFRREGSVYEVEN
HPYTVERLRCEGLVLDERVDARIGEPERDLFHAAGRPELFVEACGIPAVLLTRWIRV

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23741; Mature: 23609

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIRVSAREGYGLWAESWDSTPSPIVALEHRMLLPWIERAGARRAIDVGCGTGRWTQHL
CCCEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHH
GAIGLDSSREMLACAQGKSGLRGRLAVADATALPVADGAADLVLCALTLGHIRDHGAAMR
CCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EFARILAPGGTLLLTDFHPAAAAAGWRRTFRREGSVYEVENHPYTVERLRCEGLVLDERV
HHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCEEHHHHEECCEEECCCC
DARIGEPERDLFHAAGRPELFVEACGIPAVLLTRWIRV
CCCCCCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHCC
>Mature Secondary Structure 
SAIRVSAREGYGLWAESWDSTPSPIVALEHRMLLPWIERAGARRAIDVGCGTGRWTQHL
CCEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHH
GAIGLDSSREMLACAQGKSGLRGRLAVADATALPVADGAADLVLCALTLGHIRDHGAAMR
CCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EFARILAPGGTLLLTDFHPAAAAAGWRRTFRREGSVYEVENHPYTVERLRCEGLVLDERV
HHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCEEHHHHEECCEEECCCC
DARIGEPERDLFHAAGRPELFVEACGIPAVLLTRWIRV
CCCCCCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA